RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 APRG1Q8IVJ8 170 aa8.03□□□□□ -1.12
PKP4-206ENST00000452162 DCANP1Q8TF63 244 aa8.03□□□□□ -1.12
PKP4-206ENST00000452162 TRBV7-9A0A0J9YWB2 115 aa8.03□□□□□ -1.12
PKP4-206ENST00000452162 SYS1-DBNDD2H3BUS1 97 aa8.03□□□□□ -1.12
PKP4-206ENST00000452162 NPYP01303 97 aa8.03□□□□□ -1.12
PKP4-206ENST00000452162 CKS2P33552 79 aa8.03□□□□□ -1.12
PKP4-206ENST00000452162 NSUN5P1Q3KNT7 163 aa8.03□□□□□ -1.12
PKP4-206ENST00000452162 SAMD13Q5VXD3 122 aa8.03□□□□□ -1.12
PKP4-206ENST00000452162 ATOH7Q8N100 152 aa8.03□□□□□ -1.12
PKP4-206ENST00000452162 OR10AG1Q8NH19 301 aa8.03□□□□□ -1.12
PKP4-206ENST00000452162 NOTCH3Q9UM47 2321 aa8.03□□□□□ -1.12
PKP4-206ENST00000452162 IGHV4-4A0A075B6R2 117 aa8.02□□□□□ -1.13
PKP4-206ENST00000452162 A0A1W2PRX2 142 aa8.02□□□□□ -1.13
PKP4-206ENST00000452162 NCR2O95944 276 aa8.02□□□□□ -1.13
PKP4-206ENST00000452162 UBE2E2Q96LR5 201 aa8.02□□□□□ -1.13
PKP4-206ENST00000452162 CLUHP3Q96NS8 147 aa8.02□□□□□ -1.13
PKP4-206ENST00000452162 HSPB8Q9UJY1 196 aa8.02□□□□□ -1.13
PKP4-206ENST00000452162 IGHV4OR15-8A0A075B7B6 117 aa8.02□□□□□ -1.13
PKP4-206ENST00000452162 A0A087WW49 117 aa8.02□□□□□ -1.13
PKP4-206ENST00000452162 A0A096LNJ9 63 aa8.02□□□□□ -1.13
PKP4-206ENST00000452162 TRAV21A0A0B4J279 112 aa8.02□□□□□ -1.13
PKP4-206ENST00000452162 LOC389332A0A1B0GUA5 103 aa8.02□□□□□ -1.13
PKP4-206ENST00000452162 LGALS9O00182 355 aa8.02□□□□□ -1.13
PKP4-206ENST00000452162 EREGO14944 169 aa8.02□□□□□ -1.13
PKP4-206ENST00000452162 PPBPP02775 128 aa8.02□□□□□ -1.13
PKP4-206ENST00000452162 KHDC1LQ5JSQ8 128 aa8.02□□□□□ -1.13
PKP4-206ENST00000452162 TRAV9-2A0A087WT02 112 aa8.01□□□□□ -1.13
PKP4-206ENST00000452162 J3KRW8 73 aa8.01□□□□□ -1.13
PKP4-206ENST00000452162 ID1P41134 155 aa8.01□□□□□ -1.13
PKP4-206ENST00000452162 C18orf65Q6ZTR6 163 aa8.01□□□□□ -1.13
PKP4-206ENST00000452162 GAS8-AS1O95177 125 aa8□□□□□ -1.13
PKP4-206ENST00000452162 IGLC3P0DOY3 106 aa8□□□□□ -1.13
PKP4-206ENST00000452162 CACNG7P62955 275 aa8□□□□□ -1.13
PKP4-206ENST00000452162 PET117Q6UWS5 81 aa8□□□□□ -1.13
PKP4-206ENST00000452162 ZNF705AQ6ZN79 300 aaPredicted RBP8□□□□□ -1.13
PKP4-206ENST00000452162 NDUFA11Q86Y39 141 aa8□□□□□ -1.13
PKP4-206ENST00000452162 SNHG12Q9BXW3 62 aa8□□□□□ -1.13
PKP4-206ENST00000452162 MAP1LC3CQ9BXW4 147 aa8□□□□□ -1.13
PKP4-206ENST00000452162 MS4A6AQ9H2W1 248 aa8□□□□□ -1.13
PKP4-206ENST00000452162 LAMTOR2Q9Y2Q5 125 aa8□□□□□ -1.13
PKP4-206ENST00000452162 GOLT1BQ9Y3E0 138 aa8□□□□□ -1.13
PKP4-206ENST00000452162 TSSC4Q9Y5U2 329 aaPredicted RBP8□□□□□ -1.13
PKP4-206ENST00000452162 NBEAL1Q6ZS30 2694 aa8□□□□□ -1.13
PKP4-206ENST00000452162 H3BVH4 76 aa8□□□□□ -1.13
PKP4-206ENST00000452162 SYNJ2BPP57105 145 aa8□□□□□ -1.13
PKP4-206ENST00000452162 C20orf202A1L168 122 aa7.99□□□□□ -1.13
PKP4-206ENST00000452162 LINC01546A6NGU7 62 aa7.99□□□□□ -1.13
PKP4-206ENST00000452162 OR4C46A6NHA9 309 aa7.99□□□□□ -1.13
PKP4-206ENST00000452162 HOXD3P31249 432 aaPredicted RBP7.99□□□□□ -1.13
PKP4-206ENST00000452162 RNASE4P34096 147 aaKnown RBP7.99□□□□□ -1.13
PKP4-206ENST00000452162 KIR3DS1Q14943 382 aa7.99□□□□□ -1.13
PKP4-206ENST00000452162 MRPL52Q86TS9 123 aaKnown RBP7.99□□□□□ -1.13
PKP4-206ENST00000452162 WFDC3Q8IUB2 231 aa7.99□□□□□ -1.13
PKP4-206ENST00000452162 KLLNB2CW77 178 aa7.99□□□□□ -1.13
PKP4-206ENST00000452162 EVI2AP22794 236 aa7.99□□□□□ -1.13
PKP4-206ENST00000452162 RBX1P62877 108 aa7.99□□□□□ -1.13
PKP4-206ENST00000452162 ANXA2RQ3ZCQ2 193 aa7.99□□□□□ -1.13
PKP4-206ENST00000452162 MAP1LC3AQ9H492 121 aa7.99□□□□□ -1.13
PKP4-206ENST00000452162 K7EQG2 157 aa7.98□□□□□ -1.13
PKP4-206ENST00000452162 M0R143 59 aa7.98□□□□□ -1.13
PKP4-206ENST00000452162 TNFRSF6BO95407 300 aa7.98□□□□□ -1.13
PKP4-206ENST00000452162 MED14OSP0DP75 135 aa7.98□□□□□ -1.13
PKP4-206ENST00000452162 SPANXN1Q5VSR9 72 aa7.98□□□□□ -1.13
PKP4-206ENST00000452162 LINC01545Q5VT33 79 aa7.98□□□□□ -1.13
PKP4-206ENST00000452162 SCRT2Q9NQ03 307 aa7.98□□□□□ -1.13
PKP4-206ENST00000452162 UQCR10Q9UDW1 63 aa7.98□□□□□ -1.13
PKP4-206ENST00000452162 IGLL1P15814 213 aa7.98□□□□□ -1.13
PKP4-206ENST00000452162 GATA1P15976 413 aaPredicted RBP7.98□□□□□ -1.13
PKP4-206ENST00000452162 SMIM15Q7Z3B0 74 aa7.98□□□□□ -1.13
PKP4-206ENST00000452162 TIMM8BQ9Y5J9 83 aaPredicted RBP7.98□□□□□ -1.13
PKP4-206ENST00000452162 HBDP02042 147 aa7.97□□□□□ -1.13
PKP4-206ENST00000452162 ASIPP42127 132 aa7.97□□□□□ -1.13
PKP4-206ENST00000452162 ADAMTSL5Q6ZMM2 481 aa7.97□□□□□ -1.13
PKP4-206ENST00000452162 KLHL30-AS1Q8NEE0 82 aa7.97□□□□□ -1.13
PKP4-206ENST00000452162 NOTCH1P46531 2555 aa7.97□□□□□ -1.13
PKP4-206ENST00000452162 ZNF688P0C7X2 276 aa7.97□□□□□ -1.13
PKP4-206ENST00000452162 ZNF25P17030 456 aaPredicted RBP7.97□□□□□ -1.13
PKP4-206ENST00000452162 TFPI2P48307 235 aa7.97□□□□□ -1.13
PKP4-206ENST00000452162 PSMG4Q5JS54 123 aa7.97□□□□□ -1.13
PKP4-206ENST00000452162 NRACQ8N912 160 aa7.97□□□□□ -1.13
PKP4-206ENST00000452162 ODF3Q96PU9 254 aa7.97□□□□□ -1.13
PKP4-206ENST00000452162 A0A0J9YX75 114 aa7.96□□□□□ -1.13
PKP4-206ENST00000452162 DLEU1O43261 78 aa7.96□□□□□ -1.13
PKP4-206ENST00000452162 DEFB136Q30KP8 78 aa7.96□□□□□ -1.13
PKP4-206ENST00000452162 DEFB125Q8N687 156 aa7.96□□□□□ -1.13
PKP4-206ENST00000452162 OR2K2Q8NGT1 345 aa7.96□□□□□ -1.13
PKP4-206ENST00000452162 DUX3Q96PT4 197 aa7.96□□□□□ -1.13
PKP4-206ENST00000452162 MCRIP2Q9BUT9 160 aaKnown RBP7.96□□□□□ -1.13
PKP4-206ENST00000452162 NXT2Q9NPJ8 142 aaKnown RBP7.96□□□□□ -1.13
PKP4-206ENST00000452162 IGLV2-18A0A075B6J9 118 aa7.96□□□□□ -1.14
PKP4-206ENST00000452162 RNASE3P12724 160 aaKnown RBP7.96□□□□□ -1.14
PKP4-206ENST00000452162 FXYD7P58549 80 aa7.96□□□□□ -1.14
PKP4-206ENST00000452162 SNRPD3P62318 126 aaKnown RBP7.96□□□□□ -1.14
PKP4-206ENST00000452162 GAGE1Q13065 139 aa7.96□□□□□ -1.14
PKP4-206ENST00000452162 GNRH2O43555 120 aa7.95□□□□□ -1.14
PKP4-206ENST00000452162 SPRY2O43597 315 aa7.95□□□□□ -1.14
PKP4-206ENST00000452162 S100A4P26447 101 aaKnown RBP7.95□□□□□ -1.14
PKP4-206ENST00000452162 SLURP1P55000 103 aa7.95□□□□□ -1.14
PKP4-206ENST00000452162 MRAP2Q96G30 205 aa7.95□□□□□ -1.14
PKP4-206ENST00000452162 ST20Q9HBF5 79 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms