RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 UPK2O00526 184 aa3.18□□□□□ -1.9
HMGB1P16-201ENST00000447155 PPP1R17O96001 155 aa3.18□□□□□ -1.9
HMGB1P16-201ENST00000447155 IGKV3-15P01624 115 aa3.18□□□□□ -1.9
HMGB1P16-201ENST00000447155 CECR9P0C854 216 aa3.18□□□□□ -1.9
HMGB1P16-201ENST00000447155 RNASE2P10153 161 aaKnown RBP3.18□□□□□ -1.9
HMGB1P16-201ENST00000447155 RPL7P18124 248 aaKnown RBP3.18□□□□□ -1.9
HMGB1P16-201ENST00000447155 CFHR2P36980 270 aa3.18□□□□□ -1.9
HMGB1P16-201ENST00000447155 DLX6P56179 175 aa3.18□□□□□ -1.9
HMGB1P16-201ENST00000447155 GOLT1AQ6ZVE7 132 aa3.18□□□□□ -1.9
HMGB1P16-201ENST00000447155 C17orf82Q86X59 251 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P16-201ENST00000447155 AMN1Q8IY45 258 aa3.18□□□□□ -1.9
HMGB1P16-201ENST00000447155 Q8N8P6 123 aa3.18□□□□□ -1.9
HMGB1P16-201ENST00000447155 ZNRF2Q8NHG8 242 aa3.18□□□□□ -1.9
HMGB1P16-201ENST00000447155 COPS9Q8WXC6 57 aa3.18□□□□□ -1.9
HMGB1P16-201ENST00000447155 SRXN1Q9BYN0 137 aa3.18□□□□□ -1.9
HMGB1P16-201ENST00000447155 FGF23Q9GZV9 251 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P16-201ENST00000447155 ZNF702PQ9H963 129 aa3.18□□□□□ -1.9
HMGB1P16-201ENST00000447155 DYNLRB1Q9NP97 96 aa3.18□□□□□ -1.9
HMGB1P16-201ENST00000447155 PRR34Q9NV39 138 aa3.18□□□□□ -1.9
HMGB1P16-201ENST00000447155 CALYQ9NYX4 217 aa3.18□□□□□ -1.9
HMGB1P16-201ENST00000447155 CHCHD2Q9Y6H1 151 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P16-201ENST00000447155 DSCAML1Q8TD84 2053 aa3.18□□□□□ -1.9
HMGB1P16-201ENST00000447155 ZNF318Q5VUA4 2279 aa3.17□□□□□ -1.9
HMGB1P16-201ENST00000447155 TMSB15BA0A087X1C1 80 aa3.17□□□□□ -1.9
HMGB1P16-201ENST00000447155 IGKV2D-26A0A0A0MRZ7 120 aa3.17□□□□□ -1.9
HMGB1P16-201ENST00000447155 IGHV3-43A0A0B4J1X8 118 aa3.17□□□□□ -1.9
HMGB1P16-201ENST00000447155 TRAV4A0A0B4J268 109 aa3.17□□□□□ -1.9
HMGB1P16-201ENST00000447155 A0A0J9YW62 118 aa3.17□□□□□ -1.9
HMGB1P16-201ENST00000447155 TRBV10-2A0A0K0K1G8 114 aa3.17□□□□□ -1.9
HMGB1P16-201ENST00000447155 WI2-2373I1.2A0A1W2PRP0 233 aa3.17□□□□□ -1.9
HMGB1P16-201ENST00000447155 IQCF6A8MYZ5 107 aa3.17□□□□□ -1.9
HMGB1P16-201ENST00000447155 F5H768 121 aa3.17□□□□□ -1.9
HMGB1P16-201ENST00000447155 TCL1BO95988 128 aa3.17□□□□□ -1.9
HMGB1P16-201ENST00000447155 CRYGBP07316 175 aa3.17□□□□□ -1.9
HMGB1P16-201ENST00000447155 SAA2P0DJI9 122 aaPredicted RBP3.17□□□□□ -1.9
HMGB1P16-201ENST00000447155 IGHV3-43DP0DP04 118 aa3.17□□□□□ -1.9
HMGB1P16-201ENST00000447155 GLRXP35754 106 aa3.17□□□□□ -1.9
HMGB1P16-201ENST00000447155 CXCL5P42830 114 aa3.17□□□□□ -1.9
HMGB1P16-201ENST00000447155 C1orf61Q13536 156 aa3.17□□□□□ -1.9
HMGB1P16-201ENST00000447155 VMA21Q3ZAQ7 101 aa3.17□□□□□ -1.9
HMGB1P16-201ENST00000447155 TMEM155Q4W5P6 130 aa3.17□□□□□ -1.9
HMGB1P16-201ENST00000447155 NDUFA11Q86Y39 141 aa3.17□□□□□ -1.9
HMGB1P16-201ENST00000447155 ZCCHC24Q8N2G6 241 aaKnown RBP3.17□□□□□ -1.9
HMGB1P16-201ENST00000447155 FLYWCH2Q96CP2 140 aaKnown RBP3.17□□□□□ -1.9
HMGB1P16-201ENST00000447155 LINC00526Q96FQ7 95 aa3.17□□□□□ -1.9
HMGB1P16-201ENST00000447155 LINC01600Q96MT4 127 aa3.17□□□□□ -1.9
HMGB1P16-201ENST00000447155 MRPL35Q9NZE8 188 aaKnown RBP3.17□□□□□ -1.9
HMGB1P16-201ENST00000447155 PRO1854Q9UHT4 67 aa3.17□□□□□ -1.9
HMGB1P16-201ENST00000447155 ZNF407Q9C0G0 2248 aa3.16□□□□□ -1.9
HMGB1P16-201ENST00000447155 IGKV1OR2-108A0A075B7D4 117 aa3.16□□□□□ -1.9
HMGB1P16-201ENST00000447155 TRAV40A0A0B4J280 105 aa3.16□□□□□ -1.9
HMGB1P16-201ENST00000447155 CYSRT1A8MQ03 144 aa3.16□□□□□ -1.9
HMGB1P16-201ENST00000447155 LGALS9O00182 355 aa3.16□□□□□ -1.9
HMGB1P16-201ENST00000447155 CXCL13O43927 109 aa3.16□□□□□ -1.9
HMGB1P16-201ENST00000447155 IGHV3-23P01764 117 aa3.16□□□□□ -1.9
HMGB1P16-201ENST00000447155 ORM1P02763 201 aa3.16□□□□□ -1.9
HMGB1P16-201ENST00000447155 CD24P25063 80 aa3.16□□□□□ -1.9
HMGB1P16-201ENST00000447155 HERVK_113P63121 156 aa3.16□□□□□ -1.9
HMGB1P16-201ENST00000447155 DEFB103AP81534 67 aa3.16□□□□□ -1.9
HMGB1P16-201ENST00000447155 ALKBH6Q3KRA9 238 aa3.16□□□□□ -1.9
HMGB1P16-201ENST00000447155 RPL39P5Q59GN2 51 aa3.16□□□□□ -1.9
HMGB1P16-201ENST00000447155 LYZL1Q6UWQ5 148 aa3.16□□□□□ -1.9
HMGB1P16-201ENST00000447155 VKORC1L1Q8N0U8 176 aa3.16□□□□□ -1.9
HMGB1P16-201ENST00000447155 KIR2DL5BQ8NHK3 375 aa3.16□□□□□ -1.9
HMGB1P16-201ENST00000447155 LINC01587Q99440 93 aa3.16□□□□□ -1.9
HMGB1P16-201ENST00000447155 CNFNQ9BYD5 112 aa3.16□□□□□ -1.9
HMGB1P16-201ENST00000447155 C21orf62Q9NYP8 219 aa3.16□□□□□ -1.9
HMGB1P16-201ENST00000447155 HHLA3Q9XRX5 114 aa3.16□□□□□ -1.9
HMGB1P16-201ENST00000447155 KLF13Q9Y2Y9 288 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P16-201ENST00000447155 ATRXP46100 2492 aa3.16□□□□□ -1.9
HMGB1P16-201ENST00000447155 EP400Q96L91 3159 aa3.16□□□□□ -1.9
HMGB1P16-201ENST00000447155 HEATR1Q9H583 2144 aaKnown RBP3.16□□□□□ -1.9
HMGB1P16-201ENST00000447155 IGHV1OR21-1A0A087WYE8 117 aa3.15□□□□□ -1.91
HMGB1P16-201ENST00000447155 IGHV7-81A0A0B4J1V7 117 aa3.15□□□□□ -1.91
HMGB1P16-201ENST00000447155 IGHV1-69DA0A0B4J2H0 117 aa3.15□□□□□ -1.91
HMGB1P16-201ENST00000447155 EPOPA6NHQ4 379 aa3.15□□□□□ -1.91
HMGB1P16-201ENST00000447155 K7EM74 188 aa3.15□□□□□ -1.91
HMGB1P16-201ENST00000447155 M0R3E3 92 aa3.15□□□□□ -1.91
HMGB1P16-201ENST00000447155 RS1O15537 224 aa3.15□□□□□ -1.91
HMGB1P16-201ENST00000447155 TIMM8AO60220 97 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P16-201ENST00000447155 SH2D1AO60880 128 aa3.15□□□□□ -1.91
HMGB1P16-201ENST00000447155 NDUFA3O95167 84 aa3.15□□□□□ -1.91
HMGB1P16-201ENST00000447155 IGLV3-19P01714 112 aa3.15□□□□□ -1.91
HMGB1P16-201ENST00000447155 TRACP01848 142 aa3.15□□□□□ -1.91
HMGB1P16-201ENST00000447155 SAA1P0DJI8 122 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P16-201ENST00000447155 INAFM2P0DMQ5 153 aa3.15□□□□□ -1.91
HMGB1P16-201ENST00000447155 LINC00694P0DN24 101 aa3.15□□□□□ -1.91
HMGB1P16-201ENST00000447155 CCL3P10147 92 aa3.15□□□□□ -1.91
HMGB1P16-201ENST00000447155 CRYGAP11844 174 aa3.15□□□□□ -1.91
HMGB1P16-201ENST00000447155 COX7CP15954 63 aa3.15□□□□□ -1.91
HMGB1P16-201ENST00000447155 LGALS3P17931 250 aaKnown RBP3.15□□□□□ -1.91
HMGB1P16-201ENST00000447155 COL8A2P25067 703 aa3.15□□□□□ -1.91
HMGB1P16-201ENST00000447155 LYZP61626 148 aa3.15□□□□□ -1.91
HMGB1P16-201ENST00000447155 LOXL1Q08397 574 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P16-201ENST00000447155 C2orf82Q6UX34 121 aa3.15□□□□□ -1.91
HMGB1P16-201ENST00000447155 C16orf47Q6ZP98 133 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P16-201ENST00000447155 FAM19A5Q7Z5A7 132 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P16-201ENST00000447155 LINC00643Q86TS7 51 aa3.15□□□□□ -1.91
HMGB1P16-201ENST00000447155 TMEM167AQ8TBQ9 72 aa3.15□□□□□ -1.91
HMGB1P16-201ENST00000447155 CARD19Q96LW7 228 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms