RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 TCTEX1D1Q8N7M0 179 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 ZNF283Q8N7M2 679 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 C15orf56Q8N910 161 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 OR2K2Q8NGT1 345 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 OR5H2Q8NGV7 314 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 OR8S1Q8NH09 359 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 ZNRF2Q8NHG8 242 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 COQ8AQ8NI60 647 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 LRRC29Q8WV35 223 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 TNFAIP8L1Q8WVP5 186 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 OR5P3Q8WZ94 311 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 REEP6Q96HR9 211 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 NARS2Q96I59 477 aaKnown RBP1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 ARHGAP5-AS1Q96IT6 56 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 ABHD14BQ96IU4 210 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 C2orf50Q96LR7 162 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 AQP10Q96PS8 301 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 GNB1LQ9BYB4 327 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 TTTY10Q9BZA0 68 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 TMEM100Q9NV29 134 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 RASL12Q9NYN1 266 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 MRPL27Q9P0M9 148 aaKnown RBP1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 DOK5Q9P104 306 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 TNFSF18Q9UNG2 199 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 PSG8Q9UQ74 426 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 CARHSP1Q9Y2V2 147 aaKnown RBP1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 UFC1Q9Y3C8 167 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 TMEM56-RWDD3S4R434 201 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 IGKV1-27A0A075B6S5 117 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 TRAV8-3A0A0A6YYJ7 113 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 IGHV3-15A0A0B4J1V0 119 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 LOC389332A0A1B0GUA5 103 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 A0A1B0GW64 132 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 C5orf49A4QMS7 147 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 CRYM-AS1A6NIL9 109 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 ZNF705GA8MUZ8 300 aaPredicted RBP1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 IQCF6A8MYZ5 107 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 LEUTXA8MZ59 168 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 KRBOX1C9JBD0 128 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 F5H5P2 479 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 OVOL1O14753 267 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 GEMIN2O14893 280 aaKnown RBP1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 RBFOX2O43251 390 aaKnown RBP eCLIP1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 NDUFA2O43678 99 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 PITX3O75364 302 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 YIF1AO95070 293 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 FSTL3O95633 263 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 CDS2O95674 445 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 CYB5R3P00387 301 aaPredicted RBP1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 CFDP00746 253 aaPredicted RBP1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 HBZP02008 142 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 PMP2P02689 132 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 PPBPP02775 128 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 ATP5G1P05496 136 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 CSN2P05814 226 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 NMBP08949 121 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 CD79AP11912 226 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 MUC1P15941 1255 aaPredicted RBP1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 GZMHP20718 246 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 CD34P28906 385 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 GLRXP35754 106 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 CD200P41217 278 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 RBM11P57052 281 aaKnown RBP1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 TAS2R30P59541 319 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 RPL23P62829 140 aaKnown RBP1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 RBX1P62877 108 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 BLCAPP62952 87 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 EIF5AP63241 154 aaKnown RBP1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 SUPT4H1P63272 117 aaKnown RBP1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 REG3AQ06141 175 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 SMAGPQ0VAQ4 97 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 PRDX4Q13162 271 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 RSU1Q15404 277 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 ORMDL2Q53FV1 153 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 CENPWQ5EE01 88 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 C10orf91Q5T1B1 145 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 SPATA31B1PQ5VZV4 182 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 EIF5AL1Q6IS14 154 aaKnown RBP1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 PRSS54Q6PEW0 395 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 TOMM20LQ6UXN7 152 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 SCGB1D4Q6XE38 83 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 S100A7AQ86SG5 101 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 BAP18Q8IXM2 172 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 OSR2Q8N2R0 312 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 DRAM1Q8N682 238 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 DEFB125Q8N687 156 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 LY6G5BQ8NDX9 201 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 SLC30A7Q8NEW0 376 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 OR1L1Q8NH94 360 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 PPP1R1CQ8WVI7 109 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 MAFIPQ8WZ33 124 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 LSM10Q969L4 123 aaKnown RBP1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 CMBLQ96DG6 245 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 BORCS8Q96FH0 119 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 ACY3Q96HD9 319 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 YPEL4Q96NS1 127 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 GPER1Q99527 375 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 S100A13Q99584 98 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 CMSS1Q9BQ75 279 aaKnown RBP1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 FGF23Q9GZV9 251 aaPredicted RBP1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms