RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 MRAP2Q96G30 205 aa12.7□□□□□ -0.38
TTC3-209ENST00000438055 HHLA3Q9XRX5 114 aa12.7□□□□□ -0.38
TTC3-209ENST00000438055 CHTOPQ9Y3Y2 248 aaKnown RBP12.7□□□□□ -0.38
TTC3-209ENST00000438055 EMP1P54849 157 aa12.7□□□□□ -0.38
TTC3-209ENST00000438055 ORMDL2Q53FV1 153 aa12.7□□□□□ -0.38
TTC3-209ENST00000438055 ID1P41134 155 aa12.69□□□□□ -0.38
TTC3-209ENST00000438055 CSTL1Q9H114 145 aa12.69□□□□□ -0.38
TTC3-209ENST00000438055 NAV2Q8IVL1 2488 aa12.69□□□□□ -0.38
TTC3-209ENST00000438055 EDN2P20800 178 aa12.69□□□□□ -0.38
TTC3-209ENST00000438055 SCGB1D4Q6XE38 83 aa12.69□□□□□ -0.38
TTC3-209ENST00000438055 C10orf105Q8TEF2 133 aa12.69□□□□□ -0.38
TTC3-209ENST00000438055 DOPEY1Q5JWR5 2465 aa12.69□□□□□ -0.38
TTC3-209ENST00000438055 SAP30O75446 220 aa12.69□□□□□ -0.38
TTC3-209ENST00000438055 SPOCK3Q9BQ16 436 aa12.69□□□□□ -0.38
TTC3-209ENST00000438055 A0A087WX48 190 aa12.68□□□□□ -0.38
TTC3-209ENST00000438055 C2orf66Q6UXQ4 117 aa12.68□□□□□ -0.38
TTC3-209ENST00000438055 MEGF9Q9H1U4 602 aa12.68□□□□□ -0.38
TTC3-209ENST00000438055 IGHG2P01859 326 aa12.68□□□□□ -0.38
TTC3-209ENST00000438055 PSMG4Q5JS54 123 aa12.68□□□□□ -0.38
TTC3-209ENST00000438055 DUX5Q96PT3 197 aa12.68□□□□□ -0.38
TTC3-209ENST00000438055 GPHB5Q86YW7 130 aa12.68□□□□□ -0.38
TTC3-209ENST00000438055 LENEPQ9Y5L5 61 aa12.68□□□□□ -0.38
TTC3-209ENST00000438055 FLNCQ14315 2725 aa12.67□□□□□ -0.38
TTC3-209ENST00000438055 H7C1H1 209 aa12.67□□□□□ -0.38
TTC3-209ENST00000438055 JPT2Q9H910 190 aa12.67□□□□□ -0.38
TTC3-209ENST00000438055 SONP18583 2426 aaKnown RBP12.67□□□□□ -0.38
TTC3-209ENST00000438055 IGLV2-18A0A075B6J9 118 aa12.67□□□□□ -0.38
TTC3-209ENST00000438055 SETD2Q9BYW2 2564 aaPredicted RBP12.67□□□□□ -0.38
TTC3-209ENST00000438055 A0A1W2PPM0 123 aa12.67□□□□□ -0.38
TTC3-209ENST00000438055 RASL10AQ92737 203 aa12.67□□□□□ -0.38
TTC3-209ENST00000438055 TRAV12-2A0A075B6T6 113 aa12.66□□□□□ -0.38
TTC3-209ENST00000438055 K7EP34 96 aa12.66□□□□□ -0.38
TTC3-209ENST00000438055 PLNP26678 52 aa12.66□□□□□ -0.38
TTC3-209ENST00000438055 CDKN1BP46527 198 aa12.66□□□□□ -0.38
TTC3-209ENST00000438055 ABCA12Q86UK0 2595 aa12.66□□□□□ -0.38
TTC3-209ENST00000438055 MAPKAPK5-AS1Q8N8E1 139 aa12.66□□□□□ -0.38
TTC3-209ENST00000438055 ZNF256Q9Y2P7 627 aaPredicted RBP12.66□□□□□ -0.38
TTC3-209ENST00000438055 F8VRH5 84 aa12.65□□□□□ -0.38
TTC3-209ENST00000438055 CD300EQ496F6 205 aaPredicted RBP12.65□□□□□ -0.38
TTC3-209ENST00000438055 C10orf99Q6UWK7 81 aa12.65□□□□□ -0.38
TTC3-209ENST00000438055 PSMG3-AS1Q96PY0 264 aa12.65□□□□□ -0.38
TTC3-209ENST00000438055 CYSLTR1Q9Y271 337 aa12.65□□□□□ -0.38
TTC3-209ENST00000438055 A6NDX4 124 aa12.65□□□□□ -0.38
TTC3-209ENST00000438055 IGHV4-59P01825 116 aa12.65□□□□□ -0.38
TTC3-209ENST00000438055 RIPPLY3P57055 190 aa12.65□□□□□ -0.38
TTC3-209ENST00000438055 SRSF9Q13242 221 aaKnown RBP eCLIP12.64□□□□□ -0.39
TTC3-209ENST00000438055 AGRNO00468 2067 aa12.64□□□□□ -0.39
TTC3-209ENST00000438055 TGFAP01135 160 aa12.64□□□□□ -0.39
TTC3-209ENST00000438055 B4DSR2 109 aa12.64□□□□□ -0.39
TTC3-209ENST00000438055 AVPP01185 164 aa12.64□□□□□ -0.39
TTC3-209ENST00000438055 ZNF56Q15929 161 aa12.64□□□□□ -0.39
TTC3-209ENST00000438055 SFTA2Q6UW10 78 aa12.63□□□□□ -0.39
TTC3-209ENST00000438055 WNK1Q9H4A3 2382 aa12.63□□□□□ -0.39
TTC3-209ENST00000438055 KHDC1LQ5JSQ8 128 aa12.63□□□□□ -0.39
TTC3-209ENST00000438055 CEND1Q8N111 149 aa12.63□□□□□ -0.39
TTC3-209ENST00000438055 PRORYQ9H606 182 aa12.63□□□□□ -0.39
TTC3-209ENST00000438055 CCDC168Q8NDH2 2452 aa12.63□□□□□ -0.39
TTC3-209ENST00000438055 KIR2DL4Q99706 377 aa12.63□□□□□ -0.39
TTC3-209ENST00000438055 ZMAT4Q9H898 229 aa12.62□□□□□ -0.39
TTC3-209ENST00000438055 KLK9Q9UKQ9 250 aa12.62□□□□□ -0.39
TTC3-209ENST00000438055 IGHV4-4A0A075B6R2 117 aa12.62□□□□□ -0.39
TTC3-209ENST00000438055 PRSS29PA6NIE9 313 aa12.62□□□□□ -0.39
TTC3-209ENST00000438055 NDUFS8O00217 210 aa12.62□□□□□ -0.39
TTC3-209ENST00000438055 SYNJ2BPP57105 145 aa12.62□□□□□ -0.39
TTC3-209ENST00000438055 ATP6V0BQ99437 205 aa12.62□□□□□ -0.39
TTC3-209ENST00000438055 C20orf78Q9BR46 151 aa12.62□□□□□ -0.39
TTC3-209ENST00000438055 ITPR1Q14643 2758 aa12.61□□□□□ -0.39
TTC3-209ENST00000438055 HLA-DRB4P13762 266 aa12.61□□□□□ -0.39
TTC3-209ENST00000438055 SNRPD3P62318 126 aaKnown RBP12.61□□□□□ -0.39
TTC3-209ENST00000438055 DEFB112Q30KQ8 113 aa12.61□□□□□ -0.39
TTC3-209ENST00000438055 TP53TG1Q9Y2A0 90 aa12.61□□□□□ -0.39
TTC3-209ENST00000438055 HLA-DRB4X5D2U9 266 aa12.61□□□□□ -0.39
TTC3-209ENST00000438055 ZNF815PA8K554 130 aa12.61□□□□□ -0.39
TTC3-209ENST00000438055 DUSP14O95147 198 aaKnown RBP12.61□□□□□ -0.39
TTC3-209ENST00000438055 RNASE3P12724 160 aaKnown RBP12.61□□□□□ -0.39
TTC3-209ENST00000438055 MTURNQ8N3F0 131 aa12.61□□□□□ -0.39
TTC3-209ENST00000438055 ZNF479Q96JC4 524 aa12.61□□□□□ -0.39
TTC3-209ENST00000438055 CFAP46Q8IYW2 2715 aa12.61□□□□□ -0.39
TTC3-209ENST00000438055 TMEM170BQ5T4T1 132 aa12.61□□□□□ -0.39
TTC3-209ENST00000438055 OR5A1Q8NGJ0 315 aa12.61□□□□□ -0.39
TTC3-209ENST00000438055 C2CD3Q4AC94 2353 aa12.6□□□□□ -0.39
TTC3-209ENST00000438055 H3BUA1 57 aa12.6□□□□□ -0.39
TTC3-209ENST00000438055 SOCS3O14543 225 aa12.6□□□□□ -0.39
TTC3-209ENST00000438055 COTL1Q14019 142 aa12.6□□□□□ -0.39
TTC3-209ENST00000438055 SPINK13Q1W4C9 94 aa12.6□□□□□ -0.39
TTC3-209ENST00000438055 KLK9Q2XQG4 91 aa12.6□□□□□ -0.39
TTC3-209ENST00000438055 C19orf54Q5BKX5 351 aa12.6□□□□□ -0.39
TTC3-209ENST00000438055 HIGD1BQ9P298 99 aa12.6□□□□□ -0.39
TTC3-209ENST00000438055 ANKRD17O75179 2603 aaKnown RBP12.6□□□□□ -0.39
TTC3-209ENST00000438055 ZNF462Q96JM2 2506 aa12.6□□□□□ -0.39
TTC3-209ENST00000438055 PRADC1Q9BSG0 188 aa12.6□□□□□ -0.39
TTC3-209ENST00000438055 PPP1R17O96001 155 aa12.6□□□□□ -0.39
TTC3-209ENST00000438055 LINC01546A6NGU7 62 aa12.59□□□□□ -0.39
TTC3-209ENST00000438055 RPL39P62891 51 aaKnown RBP12.59□□□□□ -0.39
TTC3-209ENST00000438055 TOMM6Q96B49 74 aa12.59□□□□□ -0.39
TTC3-209ENST00000438055 AMTNQ6UX39 209 aa12.58□□□□□ -0.39
TTC3-209ENST00000438055 BAALCQ8WXS3 180 aa12.58□□□□□ -0.39
TTC3-209ENST00000438055 SLC25A16P16260 332 aa12.58□□□□□ -0.4
TTC3-209ENST00000438055 SDHAF1A6NFY7 115 aa12.58□□□□□ -0.4
TTC3-209ENST00000438055 MYMXA0A1B0GTQ4 84 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 1052.4 ms