RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 DEFB130BP0DP73 79 aa11.2□□□□□ -0.62
DDX55-203ENST00000421670 DEFB130AP0DP74 79 aa11.2□□□□□ -0.62
DDX55-203ENST00000421670 CT83Q5H943 113 aa11.2□□□□□ -0.62
DDX55-203ENST00000421670 SPXQ9BT56 116 aa11.2□□□□□ -0.62
DDX55-203ENST00000421670 GAGE12BA1L429 117 aa11.19□□□□□ -0.62
DDX55-203ENST00000421670 M0R2P5 195 aa11.19□□□□□ -0.62
DDX55-203ENST00000421670 GAGE7O76087 117 aa11.19□□□□□ -0.62
DDX55-203ENST00000421670 GAGE12FP0CL80 117 aa11.19□□□□□ -0.62
DDX55-203ENST00000421670 GAGE12GP0CL81 117 aa11.19□□□□□ -0.62
DDX55-203ENST00000421670 GAGE12IP0CL82 117 aa11.19□□□□□ -0.62
DDX55-203ENST00000421670 FER1L6-AS1Q8NA97 138 aa11.19□□□□□ -0.62
DDX55-203ENST00000421670 OR10AG1Q8NH19 301 aa11.19□□□□□ -0.62
DDX55-203ENST00000421670 C11orf45Q8TAV5 145 aa11.19□□□□□ -0.62
DDX55-203ENST00000421670 GTSF1Q8WW33 167 aa11.19□□□□□ -0.62
DDX55-203ENST00000421670 SCRT2Q9NQ03 307 aa11.19□□□□□ -0.62
DDX55-203ENST00000421670 PHLDA3Q9Y5J5 127 aa11.19□□□□□ -0.62
DDX55-203ENST00000421670 CXorf65A6NEN9 183 aa11.18□□□□□ -0.62
DDX55-203ENST00000421670 A8MWL6 223 aa11.18□□□□□ -0.62
DDX55-203ENST00000421670 NANOS2P60321 138 aaKnown RBP11.18□□□□□ -0.62
DDX55-203ENST00000421670 SSTP61278 116 aa11.18□□□□□ -0.62
DDX55-203ENST00000421670 ZNF876PQ49A33 203 aa11.18□□□□□ -0.62
DDX55-203ENST00000421670 M0R381 172 aa11.17□□□□□ -0.62
DDX55-203ENST00000421670 SNAI2O43623 268 aa11.17□□□□□ -0.62
DDX55-203ENST00000421670 OR5AL1P0C617 328 aa11.17□□□□□ -0.62
DDX55-203ENST00000421670 MED14OSP0DP75 135 aa11.17□□□□□ -0.62
DDX55-203ENST00000421670 DAD1P61803 113 aa11.17□□□□□ -0.62
DDX55-203ENST00000421670 TSKUQ8WUA8 353 aa11.17□□□□□ -0.62
DDX55-203ENST00000421670 SSBP4Q9BWG4 385 aaPredicted RBP11.17□□□□□ -0.62
DDX55-203ENST00000421670 TEX48A0A1B0GUV7 120 aa11.16□□□□□ -0.62
DDX55-203ENST00000421670 MT-ND4LP03901 98 aa11.16□□□□□ -0.62
DDX55-203ENST00000421670 C12orf74Q32Q52 190 aa11.16□□□□□ -0.62
DDX55-203ENST00000421670 LGALS9BQ3B8N2 356 aa11.16□□□□□ -0.62
DDX55-203ENST00000421670 DMRTA1Q5VZB9 504 aa11.16□□□□□ -0.62
DDX55-203ENST00000421670 LYZL1Q6UWQ5 148 aa11.16□□□□□ -0.62
DDX55-203ENST00000421670 LINC00612Q8N6U2 182 aa11.16□□□□□ -0.62
DDX55-203ENST00000421670 CLRN3Q8NCR9 226 aa11.16□□□□□ -0.62
DDX55-203ENST00000421670 A0A1W2PPQ1 181 aa11.16□□□□□ -0.62
DDX55-203ENST00000421670 HIGD1CA8MV81 97 aa11.16□□□□□ -0.62
DDX55-203ENST00000421670 PPP1R2P9O14990 202 aa11.16□□□□□ -0.62
DDX55-203ENST00000421670 CTRLP40313 264 aa11.16□□□□□ -0.62
DDX55-203ENST00000421670 Q6ZTC4 211 aa11.16□□□□□ -0.62
DDX55-203ENST00000421670 RASL10AQ92737 203 aa11.16□□□□□ -0.62
DDX55-203ENST00000421670 PGLYRP4Q96LB8 373 aa11.16□□□□□ -0.62
DDX55-203ENST00000421670 TRGV2A0A075B6R0 118 aa11.15□□□□□ -0.62
DDX55-203ENST00000421670 ZFP82Q8N141 532 aa11.15□□□□□ -0.62
DDX55-203ENST00000421670 SVBPQ8N300 66 aa11.15□□□□□ -0.62
DDX55-203ENST00000421670 ANAPC16Q96DE5 110 aa11.15□□□□□ -0.62
DDX55-203ENST00000421670 GFRA4Q9GZZ7 299 aa11.15□□□□□ -0.62
DDX55-203ENST00000421670 C7orf77A4D0Y5 90 aa11.14□□□□□ -0.63
DDX55-203ENST00000421670 RHEBQ15382 184 aa11.14□□□□□ -0.63
DDX55-203ENST00000421670 SPANXN1Q5VSR9 72 aa11.14□□□□□ -0.63
DDX55-203ENST00000421670 SYT8Q8NBV8 401 aa11.14□□□□□ -0.63
DDX55-203ENST00000421670 SMIM27A0A1W2PRY6 76 aa11.13□□□□□ -0.63
DDX55-203ENST00000421670 F2Z2F3 143 aa11.13□□□□□ -0.63
DDX55-203ENST00000421670 NXPH4O95158 308 aa11.13□□□□□ -0.63
DDX55-203ENST00000421670 JPT2Q9H910 190 aa11.13□□□□□ -0.63
DDX55-203ENST00000421670 FAM231BA6NCW3 169 aa11.12□□□□□ -0.63
DDX55-203ENST00000421670 SNAPINO95295 136 aa11.12□□□□□ -0.63
DDX55-203ENST00000421670 IGHV3-53P01767 116 aa11.12□□□□□ -0.63
DDX55-203ENST00000421670 FOXA3P55318 350 aaPredicted RBP11.12□□□□□ -0.63
DDX55-203ENST00000421670 NUP35Q8NFH5 326 aa11.12□□□□□ -0.63
DDX55-203ENST00000421670 PTH2Q96A98 100 aa11.12□□□□□ -0.63
DDX55-203ENST00000421670 RPS10P5Q9NQ39 176 aa11.12□□□□□ -0.63
DDX55-203ENST00000421670 MSRB1Q9NZV6 116 aa11.12□□□□□ -0.63
DDX55-203ENST00000421670 NAT8BQ9UHF3 227 aa11.12□□□□□ -0.63
DDX55-203ENST00000421670 TENM2Q9NT68 2774 aa11.12□□□□□ -0.63
DDX55-203ENST00000421670 HTN3P15516 51 aa11.11□□□□□ -0.63
DDX55-203ENST00000421670 POM121L12Q8N7R1 296 aa11.11□□□□□ -0.63
DDX55-203ENST00000421670 CNFNQ9BYD5 112 aa11.11□□□□□ -0.63
DDX55-203ENST00000421670 STARD9Q9P2P6 4700 aa11.11□□□□□ -0.63
DDX55-203ENST00000421670 DYNC2H1Q8NCM8 4307 aaKnown RBP11.11□□□□□ -0.63
DDX55-203ENST00000421670 NTF3P20783 257 aa11.11□□□□□ -0.63
DDX55-203ENST00000421670 CACNG7P62955 275 aa11.11□□□□□ -0.63
DDX55-203ENST00000421670 CFAP126Q5VTH2 177 aa11.11□□□□□ -0.63
DDX55-203ENST00000421670 ZNF479Q96JC4 524 aa11.11□□□□□ -0.63
DDX55-203ENST00000421670 CTDSP1Q9GZU7 261 aa11.11□□□□□ -0.63
DDX55-203ENST00000421670 A0A087WWC5 75 aa11.1□□□□□ -0.63
DDX55-203ENST00000421670 TRAV4A0A0B4J268 109 aa11.1□□□□□ -0.63
DDX55-203ENST00000421670 ATP5G1P05496 136 aa11.1□□□□□ -0.63
DDX55-203ENST00000421670 FAM3BP58499 235 aaPredicted RBP11.1□□□□□ -0.63
DDX55-203ENST00000421670 TWIST1Q15672 202 aa11.1□□□□□ -0.63
DDX55-203ENST00000421670 PIK3CD-AS1Q5SR53 167 aa11.1□□□□□ -0.63
DDX55-203ENST00000421670 ATRAIDQ6UW56 229 aa11.1□□□□□ -0.63
DDX55-203ENST00000421670 OR4C5Q8NGB2 326 aa11.1□□□□□ -0.63
DDX55-203ENST00000421670 C18orf15Q96N68 181 aa11.1□□□□□ -0.63
DDX55-203ENST00000421670 NDUFAF3Q9BU61 184 aa11.1□□□□□ -0.63
DDX55-203ENST00000421670 SAMD10Q9BYL1 202 aa11.1□□□□□ -0.63
DDX55-203ENST00000421670 IGHV4-4A0A075B6R2 117 aa11.09□□□□□ -0.63
DDX55-203ENST00000421670 A0A087WWL8 130 aa11.09□□□□□ -0.63
DDX55-203ENST00000421670 IGHV3-73A0A0B4J1V6 119 aa11.09□□□□□ -0.63
DDX55-203ENST00000421670 A0A1B0GUT8 65 aa11.09□□□□□ -0.63
DDX55-203ENST00000421670 A8MWV9 139 aa11.09□□□□□ -0.63
DDX55-203ENST00000421670 RS1O15537 224 aa11.09□□□□□ -0.63
DDX55-203ENST00000421670 HOXA5P20719 270 aa11.09□□□□□ -0.63
DDX55-203ENST00000421670 FAM74A4Q5TZK3 123 aa11.09□□□□□ -0.63
DDX55-203ENST00000421670 BORCS7Q96B45 105 aa11.09□□□□□ -0.63
DDX55-203ENST00000421670 WWC2-AS2Q96NR7 200 aa11.09□□□□□ -0.63
DDX55-203ENST00000421670 AP1S3Q96PC3 154 aa11.08□□□□□ -0.64
DDX55-203ENST00000421670 DEFB131BA0A096LNP1 70 aa11.07□□□□□ -0.64
DDX55-203ENST00000421670 ATP6V1G1O75348 118 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms