RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 C2orf82Q6UX34 121 aa2.45□□□□□ -2.02
SDCBPP3-201ENST00000419629 ZFP2Q6ZN57 461 aa2.45□□□□□ -2.02
SDCBPP3-201ENST00000419629 AAED1Q7RTV5 226 aa2.45□□□□□ -2.02
SDCBPP3-201ENST00000419629 MDP1Q86V88 176 aa2.45□□□□□ -2.02
SDCBPP3-201ENST00000419629 TMEM86BQ8N661 226 aa2.45□□□□□ -2.02
SDCBPP3-201ENST00000419629 C3orf56Q8N813 242 aa2.45□□□□□ -2.02
SDCBPP3-201ENST00000419629 ZNRF1Q8ND25 227 aa2.45□□□□□ -2.02
SDCBPP3-201ENST00000419629 SRSF12Q8WXF0 261 aaKnown RBP2.45□□□□□ -2.02
SDCBPP3-201ENST00000419629 FAM167A-AS1Q96KT0 104 aa2.45□□□□□ -2.02
SDCBPP3-201ENST00000419629 C9orf85Q96MD7 179 aa2.45□□□□□ -2.02
SDCBPP3-201ENST00000419629 TTTY13Q9BZ97 58 aa2.45□□□□□ -2.02
SDCBPP3-201ENST00000419629 AGPAT4-IT1Q9H0P7 198 aa2.45□□□□□ -2.02
SDCBPP3-201ENST00000419629 MRPL35Q9NZE8 188 aaKnown RBP2.45□□□□□ -2.02
SDCBPP3-201ENST00000419629 LINC00527Q9UJ94 153 aa2.45□□□□□ -2.02
SDCBPP3-201ENST00000419629 NUMA1Q14980 2115 aa2.45□□□□□ -2.02
SDCBPP3-201ENST00000419629 ABCA7Q8IZY2 2146 aa2.44□□□□□ -2.02
SDCBPP3-201ENST00000419629 THADAQ6YHU6 1953 aa2.44□□□□□ -2.02
SDCBPP3-201ENST00000419629 TRAV12-2A0A075B6T6 113 aa2.44□□□□□ -2.02
SDCBPP3-201ENST00000419629 IGKV3D-11A0A0A0MRZ8 115 aa2.44□□□□□ -2.02
SDCBPP3-201ENST00000419629 TRAV40A0A0B4J280 105 aa2.44□□□□□ -2.02
SDCBPP3-201ENST00000419629 J3QQQ9 107 aa2.44□□□□□ -2.02
SDCBPP3-201ENST00000419629 PYYP10082 97 aa2.44□□□□□ -2.02
SDCBPP3-201ENST00000419629 CD24P25063 80 aa2.44□□□□□ -2.02
SDCBPP3-201ENST00000419629 COL8A2P25067 703 aa2.44□□□□□ -2.02
SDCBPP3-201ENST00000419629 PRDX2P32119 198 aa2.44□□□□□ -2.02
SDCBPP3-201ENST00000419629 EFNA4P52798 201 aa2.44□□□□□ -2.02
SDCBPP3-201ENST00000419629 NPC2P61916 151 aa2.44□□□□□ -2.02
SDCBPP3-201ENST00000419629 CCL8P80075 99 aa2.44□□□□□ -2.02
SDCBPP3-201ENST00000419629 MRPS36P82909 103 aaKnown RBP2.44□□□□□ -2.02
SDCBPP3-201ENST00000419629 PRCDQ00LT1 54 aa2.44□□□□□ -2.02
SDCBPP3-201ENST00000419629 RPL18AQ02543 176 aaKnown RBP2.44□□□□□ -2.02
SDCBPP3-201ENST00000419629 LOXL1Q08397 574 aaPredicted RBP2.44□□□□□ -2.02
SDCBPP3-201ENST00000419629 C4orf26Q17RF5 130 aa2.44□□□□□ -2.02
SDCBPP3-201ENST00000419629 MRPL51Q4U2R6 128 aaKnown RBP2.44□□□□□ -2.02
SDCBPP3-201ENST00000419629 C2orf83Q53S99 150 aa2.44□□□□□ -2.02
SDCBPP3-201ENST00000419629 RPS19BP1Q86WX3 136 aaKnown RBP2.44□□□□□ -2.02
SDCBPP3-201ENST00000419629 SERP2Q8N6R1 65 aa2.44□□□□□ -2.02
SDCBPP3-201ENST00000419629 Q8N8P6 123 aa2.44□□□□□ -2.02
SDCBPP3-201ENST00000419629 TMEM75Q8N9X5 138 aa2.44□□□□□ -2.02
SDCBPP3-201ENST00000419629 UBALD1Q8TB05 177 aa2.44□□□□□ -2.02
SDCBPP3-201ENST00000419629 RNF138Q8WVD3 245 aa2.44□□□□□ -2.02
SDCBPP3-201ENST00000419629 FXYD5Q96DB9 178 aa2.44□□□□□ -2.02
SDCBPP3-201ENST00000419629 LINC00477Q96M19 166 aa2.44□□□□□ -2.02
SDCBPP3-201ENST00000419629 METTL26Q96S19 204 aa2.44□□□□□ -2.02
SDCBPP3-201ENST00000419629 SHANK2-AS3Q9BTD1 123 aa2.44□□□□□ -2.02
SDCBPP3-201ENST00000419629 PLA2G2FQ9BZM2 168 aa2.44□□□□□ -2.02
SDCBPP3-201ENST00000419629 SERP1Q9Y6X1 66 aa2.44□□□□□ -2.02
SDCBPP3-201ENST00000419629 TDRD6O60522 2096 aaKnown RBP2.44□□□□□ -2.02
SDCBPP3-201ENST00000419629 COL4A5P29400 1685 aa2.44□□□□□ -2.02
SDCBPP3-201ENST00000419629 SMIM26A0A096LP01 95 aa2.43□□□□□ -2.02
SDCBPP3-201ENST00000419629 TRBV30A0A0K0K1B3 111 aa2.43□□□□□ -2.02
SDCBPP3-201ENST00000419629 INS-IGF2F8WCM5 200 aa2.43□□□□□ -2.02
SDCBPP3-201ENST00000419629 NBR2O15453 112 aa2.43□□□□□ -2.02
SDCBPP3-201ENST00000419629 IGHV3-33P01772 117 aa2.43□□□□□ -2.02
SDCBPP3-201ENST00000419629 INAFM2P0DMQ5 153 aa2.43□□□□□ -2.02
SDCBPP3-201ENST00000419629 ZNF32P17041 273 aa2.43□□□□□ -2.02
SDCBPP3-201ENST00000419629 LYZP61626 148 aa2.43□□□□□ -2.02
SDCBPP3-201ENST00000419629 HIST1H4AP62805 103 aaKnown RBP2.43□□□□□ -2.02
SDCBPP3-201ENST00000419629 VMA21Q3ZAQ7 101 aa2.43□□□□□ -2.02
SDCBPP3-201ENST00000419629 ORMDL2Q53FV1 153 aa2.43□□□□□ -2.02
SDCBPP3-201ENST00000419629 CXCL17Q6UXB2 119 aa2.43□□□□□ -2.02
SDCBPP3-201ENST00000419629 C5orf38Q86SI9 138 aa2.43□□□□□ -2.02
SDCBPP3-201ENST00000419629 APRG1Q8IVJ8 170 aa2.43□□□□□ -2.02
SDCBPP3-201ENST00000419629 LYPD1Q8N2G4 141 aa2.43□□□□□ -2.02
SDCBPP3-201ENST00000419629 DAND5Q8N907 189 aa2.43□□□□□ -2.02
SDCBPP3-201ENST00000419629 KLHL30-AS1Q8NEE0 82 aa2.43□□□□□ -2.02
SDCBPP3-201ENST00000419629 Q9H3A6 140 aa2.43□□□□□ -2.02
SDCBPP3-201ENST00000419629 Q9HAA7 133 aa2.43□□□□□ -2.02
SDCBPP3-201ENST00000419629 TMEM14BQ9NUH8 114 aa2.43□□□□□ -2.02
SDCBPP3-201ENST00000419629 TMEM14CQ9P0S9 112 aa2.43□□□□□ -2.02
SDCBPP3-201ENST00000419629 DHRS4-AS1Q9P1J3 65 aa2.43□□□□□ -2.02
SDCBPP3-201ENST00000419629 LAMTOR3Q9UHA4 124 aa2.43□□□□□ -2.02
SDCBPP3-201ENST00000419629 CELA1Q9UNI1 258 aa2.43□□□□□ -2.02
SDCBPP3-201ENST00000419629 TP53TG1Q9Y2A0 90 aa2.43□□□□□ -2.02
SDCBPP3-201ENST00000419629 KLK5Q9Y337 293 aaPredicted RBP2.43□□□□□ -2.02
SDCBPP3-201ENST00000419629 CACNA1CQ13936 2221 aa2.43□□□□□ -2.02
SDCBPP3-201ENST00000419629 COL6A3P12111 3177 aa2.43□□□□□ -2.02
SDCBPP3-201ENST00000419629 ATG2BQ96BY7 2078 aa2.43□□□□□ -2.02
SDCBPP3-201ENST00000419629 FREM3P0C091 2139 aa2.42□□□□□ -2.02
SDCBPP3-201ENST00000419629 SHANK1Q9Y566 2161 aa2.42□□□□□ -2.02
SDCBPP3-201ENST00000419629 DOCK11Q5JSL3 2073 aa2.42□□□□□ -2.02
SDCBPP3-201ENST00000419629 TEX49A0A1B0GTD5 131 aa2.42□□□□□ -2.02
SDCBPP3-201ENST00000419629 FAM236DA0A1B0GTK5 79 aa2.42□□□□□ -2.02
SDCBPP3-201ENST00000419629 hADV29S1A0JD25 119 aa2.42□□□□□ -2.02
SDCBPP3-201ENST00000419629 C12orf77C9JDV5 145 aa2.42□□□□□ -2.02
SDCBPP3-201ENST00000419629 LY6LH3BQJ8 138 aa2.42□□□□□ -2.02
SDCBPP3-201ENST00000419629 NDUFA3O95167 84 aa2.42□□□□□ -2.02
SDCBPP3-201ENST00000419629 LY6G6DO95868 133 aa2.42□□□□□ -2.02
SDCBPP3-201ENST00000419629 IGHV3-30P01768 117 aa2.42□□□□□ -2.02
SDCBPP3-201ENST00000419629 IGHV3-30-5P0DP03 117 aa2.42□□□□□ -2.02
SDCBPP3-201ENST00000419629 FAM236CP0DP71 79 aa2.42□□□□□ -2.02
SDCBPP3-201ENST00000419629 ATP5EP56381 51 aaPredicted RBP2.42□□□□□ -2.02
SDCBPP3-201ENST00000419629 SYNJ2BPP57105 145 aa2.42□□□□□ -2.02
SDCBPP3-201ENST00000419629 ERHP84090 104 aaKnown RBP2.42□□□□□ -2.02
SDCBPP3-201ENST00000419629 LAGE3Q14657 143 aa2.42□□□□□ -2.02
SDCBPP3-201ENST00000419629 C17orf58Q2M2W7 97 aa2.42□□□□□ -2.02
SDCBPP3-201ENST00000419629 DEFB110Q30KQ9 67 aa2.42□□□□□ -2.02
SDCBPP3-201ENST00000419629 FAM201AQ5SY85 155 aa2.42□□□□□ -2.02
SDCBPP3-201ENST00000419629 SFTA2Q6UW10 78 aa2.42□□□□□ -2.02
SDCBPP3-201ENST00000419629 LYZL1Q6UWQ5 148 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms