RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, human

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIF3L1-206	ENST00000416651	NMB	P08949	121 aa		5.31	□□□□□ -1.56
NIF3L1-206	ENST00000416651	C14orf177	Q52M58	125 aa		5.31	□□□□□ -1.56
NIF3L1-206	ENST00000416651	GCSAML	Q5JQS6	135 aa		5.31	□□□□□ -1.56
NIF3L1-206	ENST00000416651		Q6AWC8	147 aa		5.31	□□□□□ -1.56
NIF3L1-206	ENST00000416651	FAM159A	Q6UWV7	190 aa		5.31	□□□□□ -1.56
NIF3L1-206	ENST00000416651	TMEM14EP	Q6UXP3	125 aa		5.31	□□□□□ -1.56
NIF3L1-206	ENST00000416651	C2orf50	Q96LR7	162 aa		5.31	□□□□□ -1.56
NIF3L1-206	ENST00000416651	CIB3	Q96Q77	187 aa	Predicted RBP	5.31	□□□□□ -1.56
NIF3L1-206	ENST00000416651	MIXL1	Q9H2W2	232 aa		5.31	□□□□□ -1.56
NIF3L1-206	ENST00000416651	JPT2	Q9H910	190 aa		5.31	□□□□□ -1.56
NIF3L1-206	ENST00000416651		H7C1H1	209 aa		5.3	□□□□□ -1.56
NIF3L1-206	ENST00000416651	SSSCA1	O60232	199 aa		5.3	□□□□□ -1.56
NIF3L1-206	ENST00000416651	MED6	O75586	246 aa		5.3	□□□□□ -1.56
NIF3L1-206	ENST00000416651	RPP30	P78346	268 aa	Known RBP	5.3	□□□□□ -1.56
NIF3L1-206	ENST00000416651	PRR4	Q16378	134 aa		5.3	□□□□□ -1.56
NIF3L1-206	ENST00000416651	GUK1	Q16774	197 aa		5.3	□□□□□ -1.56
NIF3L1-206	ENST00000416651	DGAT2L7P	Q6IED9	249 aa		5.3	□□□□□ -1.56
NIF3L1-206	ENST00000416651	REG3G	Q6UW15	175 aa		5.3	□□□□□ -1.56
NIF3L1-206	ENST00000416651	CLPSL2	Q6UWE3	100 aa		5.3	□□□□□ -1.56
NIF3L1-206	ENST00000416651	SPINK6	Q6UWN8	80 aa		5.3	□□□□□ -1.56
NIF3L1-206	ENST00000416651	C15orf54	Q8N8G6	183 aa		5.3	□□□□□ -1.56
NIF3L1-206	ENST00000416651	CYB561D1	Q8N8Q1	229 aa		5.3	□□□□□ -1.56
NIF3L1-206	ENST00000416651	TVP23C	Q96ET8	276 aa		5.3	□□□□□ -1.56
NIF3L1-206	ENST00000416651	C1orf43	Q9BWL3	253 aa		5.3	□□□□□ -1.56
NIF3L1-206	ENST00000416651	TIMM9	Q9Y5J7	89 aa		5.3	□□□□□ -1.56
NIF3L1-206	ENST00000416651	MUC17	Q685J3	4493 aa		5.29	□□□□□ -1.56
NIF3L1-206	ENST00000416651	FAM24A	A6NFZ4	105 aa		5.29	□□□□□ -1.56
NIF3L1-206	ENST00000416651		F6UZH7	168 aa		5.29	□□□□□ -1.56
NIF3L1-206	ENST00000416651	AKAIN1	P0CW23	69 aa		5.29	□□□□□ -1.56
NIF3L1-206	ENST00000416651	HIST1H1E	P10412	219 aa	Known RBP	5.29	□□□□□ -1.56
NIF3L1-206	ENST00000416651	NKX2-5	P52952	324 aa	Predicted RBP	5.29	□□□□□ -1.56
NIF3L1-206	ENST00000416651	RAB14	P61106	215 aa		5.29	□□□□□ -1.56
NIF3L1-206	ENST00000416651	IFITM3	Q01628	133 aa		5.29	□□□□□ -1.56
NIF3L1-206	ENST00000416651	ZNF876P	Q49A33	203 aa		5.29	□□□□□ -1.56
NIF3L1-206	ENST00000416651	PYDC2	Q56P42	97 aa		5.29	□□□□□ -1.56
NIF3L1-206	ENST00000416651	ZNF506	Q5JVG8	444 aa		5.29	□□□□□ -1.56
NIF3L1-206	ENST00000416651	LCE1A	Q5T7P2	110 aa		5.29	□□□□□ -1.56
NIF3L1-206	ENST00000416651	PXDC1	Q5TGL8	231 aa		5.29	□□□□□ -1.56
NIF3L1-206	ENST00000416651	KRTAP5-11	Q6L8G4	156 aa		5.29	□□□□□ -1.56
NIF3L1-206	ENST00000416651	PRR26	Q8N8Z3	221 aa		5.29	□□□□□ -1.56
NIF3L1-206	ENST00000416651	TMEM75	Q8N9X5	138 aa		5.29	□□□□□ -1.56
NIF3L1-206	ENST00000416651	PHYHIPL	Q96FC7	376 aa		5.29	□□□□□ -1.56
NIF3L1-206	ENST00000416651	OR51M1	Q9H341	326 aa		5.29	□□□□□ -1.56
NIF3L1-206	ENST00000416651	PRELID1	Q9Y255	219 aa		5.29	□□□□□ -1.56
NIF3L1-206	ENST00000416651	SLC25A6	P12236	298 aa		5.28	□□□□□ -1.56
NIF3L1-206	ENST00000416651	RPL19	P84098	196 aa	Known RBP	5.28	□□□□□ -1.56
NIF3L1-206	ENST00000416651	MPV17L2	Q567V2	206 aa		5.28	□□□□□ -1.56
NIF3L1-206	ENST00000416651	NRARP	Q7Z6K4	114 aa		5.28	□□□□□ -1.56
NIF3L1-206	ENST00000416651	C7orf33	Q8WU49	177 aa		5.28	□□□□□ -1.56
NIF3L1-206	ENST00000416651	FAM167A-AS1	Q96KT0	104 aa		5.28	□□□□□ -1.56
NIF3L1-206	ENST00000416651	SLC25A2	Q9BXI2	301 aa		5.28	□□□□□ -1.56
NIF3L1-206	ENST00000416651	VAX2	Q9UIW0	290 aa		5.28	□□□□□ -1.56
NIF3L1-206	ENST00000416651	URGCP-MRPS24	S4R325	110 aa		5.28	□□□□□ -1.56
NIF3L1-206	ENST00000416651	IGKV2-24	A0A0C4DH68	120 aa		5.27	□□□□□ -1.57
NIF3L1-206	ENST00000416651	FAM240B	A0A1B0GVZ2	78 aa		5.27	□□□□□ -1.57
NIF3L1-206	ENST00000416651	CTDSPL	O15194	276 aa		5.27	□□□□□ -1.57
NIF3L1-206	ENST00000416651	EIF3G	O75821	320 aa	Known RBP eCLIP	5.27	□□□□□ -1.57
NIF3L1-206	ENST00000416651	CAMLG	P49069	296 aa		5.27	□□□□□ -1.57
NIF3L1-206	ENST00000416651	IFITM2	Q01629	132 aa		5.27	□□□□□ -1.57
NIF3L1-206	ENST00000416651	RAB32	Q13637	225 aa		5.27	□□□□□ -1.57
NIF3L1-206	ENST00000416651	TCTE3	Q8IZS6	198 aa		5.27	□□□□□ -1.57
NIF3L1-206	ENST00000416651	PRSS3P2	Q8NHM4	247 aa		5.27	□□□□□ -1.57
NIF3L1-206	ENST00000416651	DIRAS2	Q96HU8	199 aa		5.27	□□□□□ -1.57
NIF3L1-206	ENST00000416651	SMIM8	Q96KF7	97 aa		5.27	□□□□□ -1.57
NIF3L1-206	ENST00000416651	LINC00479	Q96M42	142 aa		5.27	□□□□□ -1.57
NIF3L1-206	ENST00000416651	PARL	Q9H300	379 aa		5.27	□□□□□ -1.57
NIF3L1-206	ENST00000416651	MGAT4C	Q9UBM8	478 aa		5.27	□□□□□ -1.57
NIF3L1-206	ENST00000416651	IGHV3-64	A0A075B6Q5	118 aa		5.26	□□□□□ -1.57
NIF3L1-206	ENST00000416651		A0A087WX48	190 aa		5.26	□□□□□ -1.57
NIF3L1-206	ENST00000416651	DUXB	A0A1W2PPF3	345 aa		5.26	□□□□□ -1.57
NIF3L1-206	ENST00000416651	ZNF80	P51504	273 aa	Predicted RBP	5.26	□□□□□ -1.57
NIF3L1-206	ENST00000416651	COX6A2	Q02221	97 aa		5.26	□□□□□ -1.57
NIF3L1-206	ENST00000416651	PPP1R1A	Q13522	171 aa		5.26	□□□□□ -1.57
NIF3L1-206	ENST00000416651	MAJIN	Q3KP22	176 aa		5.26	□□□□□ -1.57
NIF3L1-206	ENST00000416651	UFSP1	Q6NVU6	142 aa		5.26	□□□□□ -1.57
NIF3L1-206	ENST00000416651	MIR17HG	Q75NE6	70 aa		5.26	□□□□□ -1.57
NIF3L1-206	ENST00000416651	S100A7A	Q86SG5	101 aa		5.26	□□□□□ -1.57
NIF3L1-206	ENST00000416651	RNF185	Q96GF1	192 aa		5.26	□□□□□ -1.57
NIF3L1-206	ENST00000416651	HYLS1	Q96M11	299 aa		5.26	□□□□□ -1.57
NIF3L1-206	ENST00000416651	C9orf85	Q96MD7	179 aa		5.26	□□□□□ -1.57
NIF3L1-206	ENST00000416651	PRRT1	Q99946	306 aa		5.26	□□□□□ -1.57
NIF3L1-206	ENST00000416651	TMEM14C	Q9P0S9	112 aa		5.26	□□□□□ -1.57
NIF3L1-206	ENST00000416651	IGLV10-54	A0A075B6I4	117 aa		5.25	□□□□□ -1.57
NIF3L1-206	ENST00000416651		A0A087WWL8	130 aa		5.25	□□□□□ -1.57
NIF3L1-206	ENST00000416651	hDV102S1	A0JD36	115 aa		5.25	□□□□□ -1.57
NIF3L1-206	ENST00000416651	ANKRD20A5P	A0PJZ0	165 aa		5.25	□□□□□ -1.57
NIF3L1-206	ENST00000416651	TMEM262	E9PQX1	116 aa		5.25	□□□□□ -1.57
NIF3L1-206	ENST00000416651	FNDC10	F2Z333	226 aa		5.25	□□□□□ -1.57
NIF3L1-206	ENST00000416651	CTDSP2	O14595	271 aa		5.25	□□□□□ -1.57
NIF3L1-206	ENST00000416651	TSC22D2	O75157	780 aa		5.25	□□□□□ -1.57
NIF3L1-206	ENST00000416651	SFT2D2	O95562	160 aa		5.25	□□□□□ -1.57
NIF3L1-206	ENST00000416651	IFNA7	P01567	189 aa		5.25	□□□□□ -1.57
NIF3L1-206	ENST00000416651	MBP	P02686	304 aa	Predicted RBP	5.25	□□□□□ -1.57
NIF3L1-206	ENST00000416651	MGST1	P10620	155 aa	Known RBP	5.25	□□□□□ -1.57
NIF3L1-206	ENST00000416651	ANXA3	P12429	323 aa		5.25	□□□□□ -1.57
NIF3L1-206	ENST00000416651	RNASE3	P12724	160 aa	Known RBP	5.25	□□□□□ -1.57
NIF3L1-206	ENST00000416651	MAL	P21145	153 aa		5.25	□□□□□ -1.57
NIF3L1-206	ENST00000416651	CNBP	P62633	177 aa	Known RBP	5.25	□□□□□ -1.57
NIF3L1-206	ENST00000416651	SRPX	P78539	464 aa		5.25	□□□□□ -1.57
NIF3L1-206	ENST00000416651		Q0VG73	95 aa		5.25	□□□□□ -1.57

Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms