RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 EVI2AP22794 236 aa1.38□□□□□ -2.19
RNU6-1140P-201ENST00000410517 PSMA1P25786 263 aaKnown RBP1.38□□□□□ -2.19
RNU6-1140P-201ENST00000410517 INPP1P49441 399 aa1.38□□□□□ -2.19
RNU6-1140P-201ENST00000410517 HLA-DRB3P79483 266 aa1.38□□□□□ -2.19
RNU6-1140P-201ENST00000410517 ERHP84090 104 aaKnown RBP1.38□□□□□ -2.19
RNU6-1140P-201ENST00000410517 LRP2P98164 4655 aa1.38□□□□□ -2.19
RNU6-1140P-201ENST00000410517 PIGYQ3MUY2 71 aa1.38□□□□□ -2.19
RNU6-1140P-201ENST00000410517 PYDC2Q56P42 97 aa1.38□□□□□ -2.19
RNU6-1140P-201ENST00000410517 KIAA2026Q5HYC2 2103 aa1.38□□□□□ -2.19
RNU6-1140P-201ENST00000410517 C1orf194Q5T5A4 169 aa1.38□□□□□ -2.19
RNU6-1140P-201ENST00000410517 EBLN2Q6P2I7 272 aa1.38□□□□□ -2.19
RNU6-1140P-201ENST00000410517 GLIPR1L1Q6UWM5 242 aa1.38□□□□□ -2.19
RNU6-1140P-201ENST00000410517 FOXI2Q6ZQN5 318 aa1.38□□□□□ -2.19
RNU6-1140P-201ENST00000410517 Q6ZS49 121 aa1.38□□□□□ -2.19
RNU6-1140P-201ENST00000410517 OR1L8Q8NGR8 309 aa1.38□□□□□ -2.19
RNU6-1140P-201ENST00000410517 OR4K15Q8NH41 348 aa1.38□□□□□ -2.19
RNU6-1140P-201ENST00000410517 MRPL30Q8TCC3 161 aaKnown RBP1.38□□□□□ -2.19
RNU6-1140P-201ENST00000410517 SMIM19Q96E16 107 aa1.38□□□□□ -2.19
RNU6-1140P-201ENST00000410517 FMC1Q96HJ9 113 aa1.38□□□□□ -2.19
RNU6-1140P-201ENST00000410517 NIPSNAP1Q9BPW8 284 aa1.38□□□□□ -2.19
RNU6-1140P-201ENST00000410517 C7orf50Q9BRJ6 194 aaKnown RBP1.38□□□□□ -2.19
RNU6-1140P-201ENST00000410517 TMEM208Q9BTX3 173 aa1.38□□□□□ -2.19
RNU6-1140P-201ENST00000410517 PECRQ9BY49 303 aa1.38□□□□□ -2.19
RNU6-1140P-201ENST00000410517 WFDC10AQ9H1F0 79 aa1.38□□□□□ -2.19
RNU6-1140P-201ENST00000410517 DCSTAMPQ9H295 470 aa1.38□□□□□ -2.19
RNU6-1140P-201ENST00000410517 MS4A6AQ9H2W1 248 aa1.38□□□□□ -2.19
RNU6-1140P-201ENST00000410517 DPH3P1Q9H4G8 78 aa1.38□□□□□ -2.19
RNU6-1140P-201ENST00000410517 VSIRQ9H7M9 311 aa1.38□□□□□ -2.19
RNU6-1140P-201ENST00000410517 KCNIP2Q9NS61 270 aa1.38□□□□□ -2.19
RNU6-1140P-201ENST00000410517 DOK5Q9P104 306 aa1.38□□□□□ -2.19
RNU6-1140P-201ENST00000410517 CLEC2DQ9UHP7 191 aa1.38□□□□□ -2.19
RNU6-1140P-201ENST00000410517 PRNDQ9UKY0 176 aa1.38□□□□□ -2.19
RNU6-1140P-201ENST00000410517 POMPQ9Y244 141 aa1.38□□□□□ -2.19
RNU6-1140P-201ENST00000410517 ARL2BPQ9Y2Y0 163 aa1.38□□□□□ -2.19
RNU6-1140P-201ENST00000410517 MRPS16Q9Y3D3 137 aaKnown RBP1.38□□□□□ -2.19
RNU6-1140P-201ENST00000410517 TRBV6-7A0A0A0MS04 114 aa1.37□□□□□ -2.19
RNU6-1140P-201ENST00000410517 PPP5D1E7EU14 171 aa1.37□□□□□ -2.19
RNU6-1140P-201ENST00000410517 H3BQ85 93 aa1.37□□□□□ -2.19
RNU6-1140P-201ENST00000410517 J3QLW9 94 aa1.37□□□□□ -2.19
RNU6-1140P-201ENST00000410517 ARL6IP5O75915 188 aa1.37□□□□□ -2.19
RNU6-1140P-201ENST00000410517 PET100P0DJ07 73 aa1.37□□□□□ -2.19
RNU6-1140P-201ENST00000410517 SAA1P0DJI8 122 aaPredicted RBP1.37□□□□□ -2.19
RNU6-1140P-201ENST00000410517 SLC25A4P12235 298 aa1.37□□□□□ -2.19
RNU6-1140P-201ENST00000410517 HLA-DRB4P13762 266 aa1.37□□□□□ -2.19
RNU6-1140P-201ENST00000410517 SNCAP37840 140 aa1.37□□□□□ -2.19
RNU6-1140P-201ENST00000410517 RPL5P46777 297 aaKnown RBP1.37□□□□□ -2.19
RNU6-1140P-201ENST00000410517 PSMB3P49720 205 aa1.37□□□□□ -2.19
RNU6-1140P-201ENST00000410517 DEFB131AP59861 70 aa1.37□□□□□ -2.19
RNU6-1140P-201ENST00000410517 SPCS2Q15005 226 aa1.37□□□□□ -2.19
RNU6-1140P-201ENST00000410517 GUK1Q16774 197 aa1.37□□□□□ -2.19
RNU6-1140P-201ENST00000410517 DNAL1Q4LDG9 190 aa1.37□□□□□ -2.19
RNU6-1140P-201ENST00000410517 Q56UQ5 140 aa1.37□□□□□ -2.19
RNU6-1140P-201ENST00000410517 HSP90B2PQ58FF3 399 aa1.37□□□□□ -2.19
RNU6-1140P-201ENST00000410517 RPL39P5Q59GN2 51 aa1.37□□□□□ -2.19
RNU6-1140P-201ENST00000410517 C12orf73Q69YU5 71 aa1.37□□□□□ -2.19
RNU6-1140P-201ENST00000410517 LPCAT3Q6P1A2 487 aa1.37□□□□□ -2.19
RNU6-1140P-201ENST00000410517 Q6ZRU5 148 aa1.37□□□□□ -2.19
RNU6-1140P-201ENST00000410517 HS3ST5Q8IZT8 346 aa1.37□□□□□ -2.19
RNU6-1140P-201ENST00000410517 EIF4E3Q8N5X7 224 aaKnown RBP1.37□□□□□ -2.19
RNU6-1140P-201ENST00000410517 LINC00337Q8N6G1 96 aa1.37□□□□□ -2.19
RNU6-1140P-201ENST00000410517 Q8WTZ3 238 aa1.37□□□□□ -2.19
RNU6-1140P-201ENST00000410517 TMEM203Q969S6 136 aa1.37□□□□□ -2.19
RNU6-1140P-201ENST00000410517 GNPNAT1Q96EK6 184 aaPredicted RBP1.37□□□□□ -2.19
RNU6-1140P-201ENST00000410517 CMSS1Q9BQ75 279 aaKnown RBP1.37□□□□□ -2.19
RNU6-1140P-201ENST00000410517 EIF5A2Q9GZV4 153 aaKnown RBP1.37□□□□□ -2.19
RNU6-1140P-201ENST00000410517 OR2D2Q9H210 308 aa1.37□□□□□ -2.19
RNU6-1140P-201ENST00000410517 HRASLSQ9HDD0 168 aa1.37□□□□□ -2.19
RNU6-1140P-201ENST00000410517 IFT46Q9NQC8 304 aa1.37□□□□□ -2.19
RNU6-1140P-201ENST00000410517 RPRMQ9NS64 109 aa1.37□□□□□ -2.19
RNU6-1140P-201ENST00000410517 RABAC1Q9UI14 185 aa1.37□□□□□ -2.19
RNU6-1140P-201ENST00000410517 TIMM8BQ9Y5J9 83 aaPredicted RBP1.37□□□□□ -2.19
RNU6-1140P-201ENST00000410517 ZNF706Q9Y5V0 76 aaPredicted RBP1.37□□□□□ -2.19
RNU6-1140P-201ENST00000410517 ALG5Q9Y673 324 aa1.37□□□□□ -2.19
RNU6-1140P-201ENST00000410517 LY96Q9Y6Y9 160 aa1.37□□□□□ -2.19
RNU6-1140P-201ENST00000410517 HLA-DRB4X5D2U9 266 aa1.37□□□□□ -2.19
RNU6-1140P-201ENST00000410517 TRBV24-1A0A075B6N3 115 aa1.36□□□□□ -2.19
RNU6-1140P-201ENST00000410517 A0A0D9SG52 128 aa1.36□□□□□ -2.19
RNU6-1140P-201ENST00000410517 A0A1B0GXF2 115 aa1.36□□□□□ -2.19
RNU6-1140P-201ENST00000410517 C9JCJ5 164 aa1.36□□□□□ -2.19
RNU6-1140P-201ENST00000410517 F5H768 121 aa1.36□□□□□ -2.19
RNU6-1140P-201ENST00000410517 TMEM250H0YL14 139 aa1.36□□□□□ -2.19
RNU6-1140P-201ENST00000410517 H3BMM0 161 aa1.36□□□□□ -2.19
RNU6-1140P-201ENST00000410517 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.36□□□□□ -2.19
RNU6-1140P-201ENST00000410517 H7BYZ3 331 aa1.36□□□□□ -2.19
RNU6-1140P-201ENST00000410517 J3QRE1 110 aa1.36□□□□□ -2.19
RNU6-1140P-201ENST00000410517 ISLRO14498 428 aa1.36□□□□□ -2.19
RNU6-1140P-201ENST00000410517 HMGB3O15347 200 aaKnown RBP1.36□□□□□ -2.19
RNU6-1140P-201ENST00000410517 TNFAIP8O95379 198 aa1.36□□□□□ -2.19
RNU6-1140P-201ENST00000410517 CDS2O95674 445 aa1.36□□□□□ -2.19
RNU6-1140P-201ENST00000410517 ORM1P02763 201 aa1.36□□□□□ -2.19
RNU6-1140P-201ENST00000410517 CTSGP08311 255 aa1.36□□□□□ -2.19
RNU6-1140P-201ENST00000410517 CRYBB3P26998 211 aa1.36□□□□□ -2.19
RNU6-1140P-201ENST00000410517 PSG9Q00887 426 aa1.36□□□□□ -2.19
RNU6-1140P-201ENST00000410517 DHRS2Q13268 280 aa1.36□□□□□ -2.19
RNU6-1140P-201ENST00000410517 RAB31Q13636 194 aa1.36□□□□□ -2.19
RNU6-1140P-201ENST00000410517 ACSM3Q53FZ2 586 aa1.36□□□□□ -2.19
RNU6-1140P-201ENST00000410517 PDZD11Q5EBL8 140 aa1.36□□□□□ -2.19
RNU6-1140P-201ENST00000410517 ADM2Q7Z4H4 148 aa1.36□□□□□ -2.19
RNU6-1140P-201ENST00000410517 FAM19A1Q7Z5A9 133 aa1.36□□□□□ -2.19
RNU6-1140P-201ENST00000410517 PRNTQ86SH4 94 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms