RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 GNG5P63218 68 aa7.58□□□□□ -1.2
SPTLC1P3-201ENST00000403408 ATP6V1FQ16864 119 aa7.58□□□□□ -1.2
SPTLC1P3-201ENST00000403408 SPANXN2Q5MJ10 180 aa7.58□□□□□ -1.2
SPTLC1P3-201ENST00000403408 ENHOQ6UWT2 76 aa7.58□□□□□ -1.2
SPTLC1P3-201ENST00000403408 OR2T35Q8NGX2 323 aa7.58□□□□□ -1.2
SPTLC1P3-201ENST00000403408 PTH2Q96A98 100 aa7.58□□□□□ -1.2
SPTLC1P3-201ENST00000403408 C2orf50Q96LR7 162 aa7.58□□□□□ -1.2
SPTLC1P3-201ENST00000403408 TREM1Q9NP99 234 aa7.58□□□□□ -1.2
SPTLC1P3-201ENST00000403408 PGPA6NDG6 321 aa7.57□□□□□ -1.2
SPTLC1P3-201ENST00000403408 GAS8-AS1O95177 125 aa7.57□□□□□ -1.2
SPTLC1P3-201ENST00000403408 S100A10P60903 97 aa7.57□□□□□ -1.2
SPTLC1P3-201ENST00000403408 UBE2L3P68036 154 aaKnown RBP7.57□□□□□ -1.2
SPTLC1P3-201ENST00000403408 SDIM1Q6ZPB5 146 aa7.57□□□□□ -1.2
SPTLC1P3-201ENST00000403408 RMI2Q96E14 147 aa7.57□□□□□ -1.2
SPTLC1P3-201ENST00000403408 FAT4Q6V0I7 4981 aa7.57□□□□□ -1.2
SPTLC1P3-201ENST00000403408 USP17L23D6RBM5 183 aa7.56□□□□□ -1.2
SPTLC1P3-201ENST00000403408 HBG1P69891 147 aa7.56□□□□□ -1.2
SPTLC1P3-201ENST00000403408 HBG2P69892 147 aa7.56□□□□□ -1.2
SPTLC1P3-201ENST00000403408 STX12Q86Y82 276 aa7.56□□□□□ -1.2
SPTLC1P3-201ENST00000403408 C9orf163Q8N9P6 203 aa7.56□□□□□ -1.2
SPTLC1P3-201ENST00000403408 OR5C1Q8NGR4 320 aa7.56□□□□□ -1.2
SPTLC1P3-201ENST00000403408 KCNS1Q96KK3 526 aa7.56□□□□□ -1.2
SPTLC1P3-201ENST00000403408 KRTAP4-8Q9BYQ9 185 aa7.56□□□□□ -1.2
SPTLC1P3-201ENST00000403408 WDR61Q9GZS3 305 aaKnown RBP7.56□□□□□ -1.2
SPTLC1P3-201ENST00000403408 OTORQ9NRC9 128 aa7.56□□□□□ -1.2
SPTLC1P3-201ENST00000403408 PLA2G10O15496 165 aa7.55□□□□□ -1.2
SPTLC1P3-201ENST00000403408 CIRBPQ14011 172 aaKnown RBP7.55□□□□□ -1.2
SPTLC1P3-201ENST00000403408 KRTAP26-1Q6PEX3 210 aa7.55□□□□□ -1.2
SPTLC1P3-201ENST00000403408 A0A087WWC5 75 aa7.54□□□□□ -1.2
SPTLC1P3-201ENST00000403408 H0YIZ8 118 aa7.54□□□□□ -1.2
SPTLC1P3-201ENST00000403408 PVALBP20472 110 aaPredicted RBP7.54□□□□□ -1.2
SPTLC1P3-201ENST00000403408 ZFP2Q6ZN57 461 aa7.54□□□□□ -1.2
SPTLC1P3-201ENST00000403408 ATP5SQ99766 215 aa7.54□□□□□ -1.2
SPTLC1P3-201ENST00000403408 NMES1Q9C002 83 aa7.54□□□□□ -1.2
SPTLC1P3-201ENST00000403408 MBD2Q9UBB5 411 aa7.54□□□□□ -1.2
SPTLC1P3-201ENST00000403408 IGKV3D-20A0A0C4DH25 116 aa7.53□□□□□ -1.2
SPTLC1P3-201ENST00000403408 TRIQKQ629K1 86 aa7.53□□□□□ -1.2
SPTLC1P3-201ENST00000403408 LINC01600Q96MT4 127 aa7.53□□□□□ -1.2
SPTLC1P3-201ENST00000403408 OR5AC2Q9NZP5 309 aa7.53□□□□□ -1.2
SPTLC1P3-201ENST00000403408 TRAV6A0A075B6T7 132 aa7.52□□□□□ -1.21
SPTLC1P3-201ENST00000403408 GCGP01275 180 aa7.52□□□□□ -1.21
SPTLC1P3-201ENST00000403408 CHTF8P0CG12 524 aa7.52□□□□□ -1.21
SPTLC1P3-201ENST00000403408 KRTAP10-8P60410 259 aa7.52□□□□□ -1.21
SPTLC1P3-201ENST00000403408 C14orf177Q52M58 125 aa7.52□□□□□ -1.21
SPTLC1P3-201ENST00000403408 FFAR4Q5NUL3 377 aa7.52□□□□□ -1.21
SPTLC1P3-201ENST00000403408 SLPIP03973 132 aa7.51□□□□□ -1.21
SPTLC1P3-201ENST00000403408 TCRBP04435 133 aa7.51□□□□□ -1.21
SPTLC1P3-201ENST00000403408 IL7P13232 177 aa7.51□□□□□ -1.21
SPTLC1P3-201ENST00000403408 S100A5P33763 92 aa7.51□□□□□ -1.21
SPTLC1P3-201ENST00000403408 LGALSLQ3ZCW2 172 aaPredicted RBP7.51□□□□□ -1.21
SPTLC1P3-201ENST00000403408 MPV17L2Q567V2 206 aa7.51□□□□□ -1.21
SPTLC1P3-201ENST00000403408 CMTM2Q8TAZ6 248 aa7.51□□□□□ -1.21
SPTLC1P3-201ENST00000403408 CHCHD7Q9BUK0 85 aa7.51□□□□□ -1.21
SPTLC1P3-201ENST00000403408 C1orf43Q9BWL3 253 aa7.51□□□□□ -1.21
SPTLC1P3-201ENST00000403408 KRTAP9-2Q9BYQ4 174 aa7.51□□□□□ -1.21
SPTLC1P3-201ENST00000403408 URGCP-MRPS24S4R325 110 aa7.51□□□□□ -1.21
SPTLC1P3-201ENST00000403408 A0A087WX48 190 aa7.5□□□□□ -1.21
SPTLC1P3-201ENST00000403408 A0A087WYN8 130 aa7.5□□□□□ -1.21
SPTLC1P3-201ENST00000403408 A8MWV9 139 aa7.5□□□□□ -1.21
SPTLC1P3-201ENST00000403408 TAAR5O14804 337 aa7.5□□□□□ -1.21
SPTLC1P3-201ENST00000403408 SIX6O95475 246 aa7.5□□□□□ -1.21
SPTLC1P3-201ENST00000403408 KHDC3LQ587J8 217 aa7.5□□□□□ -1.21
SPTLC1P3-201ENST00000403408 DGAT2L7PQ6IED9 249 aa7.5□□□□□ -1.21
SPTLC1P3-201ENST00000403408 ARL6IP6Q8N6S5 226 aa7.5□□□□□ -1.21
SPTLC1P3-201ENST00000403408 C15orf54Q8N8G6 183 aa7.5□□□□□ -1.21
SPTLC1P3-201ENST00000403408 OR10G7Q8NGN6 311 aa7.5□□□□□ -1.21
SPTLC1P3-201ENST00000403408 PSG8Q9UQ74 426 aa7.5□□□□□ -1.21
SPTLC1P3-201ENST00000403408 A0A0D9SG52 128 aa7.49□□□□□ -1.21
SPTLC1P3-201ENST00000403408 PHOX2AO14813 284 aa7.49□□□□□ -1.21
SPTLC1P3-201ENST00000403408 HMGB3O15347 200 aaKnown RBP7.49□□□□□ -1.21
SPTLC1P3-201ENST00000403408 HLA-DQA1P01909 254 aa7.49□□□□□ -1.21
SPTLC1P3-201ENST00000403408 FGF8P55075 233 aaPredicted RBP7.49□□□□□ -1.21
SPTLC1P3-201ENST00000403408 UBE2D3P61077 147 aa7.49□□□□□ -1.21
SPTLC1P3-201ENST00000403408 UBE2D2P62837 147 aa7.49□□□□□ -1.21
SPTLC1P3-201ENST00000403408 Q0VG73 95 aa7.49□□□□□ -1.21
SPTLC1P3-201ENST00000403408 PIK3CD-AS1Q5SR53 167 aa7.49□□□□□ -1.21
SPTLC1P3-201ENST00000403408 OR10G9Q8NGN4 311 aa7.49□□□□□ -1.21
SPTLC1P3-201ENST00000403408 ZC2HC1AQ96GY0 325 aa7.49□□□□□ -1.21
SPTLC1P3-201ENST00000403408 RBM38Q9H0Z9 239 aaKnown RBP7.49□□□□□ -1.21
SPTLC1P3-201ENST00000403408 SH3BGRL3Q9H299 93 aa7.49□□□□□ -1.21
SPTLC1P3-201ENST00000403408 A0A087WWL8 130 aa7.48□□□□□ -1.21
SPTLC1P3-201ENST00000403408 NOL3O60936 208 aaKnown RBP7.48□□□□□ -1.21
SPTLC1P3-201ENST00000403408 TCRAP04437 139 aa7.48□□□□□ -1.21
SPTLC1P3-201ENST00000403408 SEC11BP0C7V7 166 aa7.48□□□□□ -1.21
SPTLC1P3-201ENST00000403408 OR2G3Q8NGZ4 309 aa7.48□□□□□ -1.21
SPTLC1P3-201ENST00000403408 WFDC1Q9HC57 220 aa7.48□□□□□ -1.21
SPTLC1P3-201ENST00000403408 NUDT15Q9NV35 164 aa7.48□□□□□ -1.21
SPTLC1P3-201ENST00000403408 A0A0J9YXV3 536 aa7.47□□□□□ -1.21
SPTLC1P3-201ENST00000403408 CENPXA8MT69 81 aa7.47□□□□□ -1.21
SPTLC1P3-201ENST00000403408 LYRM1O43325 122 aa7.47□□□□□ -1.21
SPTLC1P3-201ENST00000403408 RAB2AP61019 212 aa7.47□□□□□ -1.21
SPTLC1P3-201ENST00000403408 RPL19P84098 196 aaKnown RBP7.47□□□□□ -1.21
SPTLC1P3-201ENST00000403408 ELOBQ15370 118 aa7.47□□□□□ -1.21
SPTLC1P3-201ENST00000403408 CNPY1Q3B7I2 92 aa7.47□□□□□ -1.21
SPTLC1P3-201ENST00000403408 PRNTQ86SH4 94 aa7.47□□□□□ -1.21
SPTLC1P3-201ENST00000403408 SPACA4Q8TDM5 124 aa7.47□□□□□ -1.21
SPTLC1P3-201ENST00000403408 KCNIP2Q9NS61 270 aa7.47□□□□□ -1.21
SPTLC1P3-201ENST00000403408 KIF25-AS1Q9Y6Z4 181 aa7.47□□□□□ -1.21
SPTLC1P3-201ENST00000403408 TRBV6-8A0A0A6YYG3 113 aa7.46□□□□□ -1.22
SPTLC1P3-201ENST00000403408 MUC21A0A0G2JKD1 596 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms