RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 S100A4P26447 101 aaKnown RBP10.63□□□□□ -0.71
APOB-202ENST00000399256 DEFB1P60022 68 aa10.63□□□□□ -0.71
APOB-202ENST00000399256 TIMD4Q96H15 378 aa10.63□□□□□ -0.71
APOB-202ENST00000399256 UBE2D1P51668 147 aa10.63□□□□□ -0.71
APOB-202ENST00000399256 RNF223E7ERA6 249 aa10.62□□□□□ -0.71
APOB-202ENST00000399256 ATP6V0E2Q8NHE4 81 aa10.62□□□□□ -0.71
APOB-202ENST00000399256 C20orf173Q96LM9 149 aa10.62□□□□□ -0.71
APOB-202ENST00000399256 COX6B1P14854 86 aa10.62□□□□□ -0.71
APOB-202ENST00000399256 EBI3Q14213 229 aa10.62□□□□□ -0.71
APOB-202ENST00000399256 DPH3P1Q9H4G8 78 aa10.62□□□□□ -0.71
APOB-202ENST00000399256 PKD1L2Q7Z442 2459 aa10.62□□□□□ -0.71
APOB-202ENST00000399256 DUSP14O95147 198 aaKnown RBP10.62□□□□□ -0.71
APOB-202ENST00000399256 XGP55808 180 aa10.62□□□□□ -0.71
APOB-202ENST00000399256 LY6DQ14210 128 aa10.62□□□□□ -0.71
APOB-202ENST00000399256 PHLDA3Q9Y5J5 127 aa10.62□□□□□ -0.71
APOB-202ENST00000399256 CRYBA4P53673 196 aa10.61□□□□□ -0.71
APOB-202ENST00000399256 MED13LQ71F56 2210 aa10.61□□□□□ -0.71
APOB-202ENST00000399256 MRPL53Q96EL3 112 aaKnown RBP10.61□□□□□ -0.71
APOB-202ENST00000399256 CARD19Q96LW7 228 aa10.61□□□□□ -0.71
APOB-202ENST00000399256 ANKHD1Q8IWZ3 2542 aaKnown RBP10.61□□□□□ -0.71
APOB-202ENST00000399256 C11orf86A6NJI1 115 aa10.6□□□□□ -0.71
APOB-202ENST00000399256 CD7P09564 240 aa10.6□□□□□ -0.71
APOB-202ENST00000399256 UBE2D3P61077 147 aa10.6□□□□□ -0.71
APOB-202ENST00000399256 UBE2D2P62837 147 aa10.6□□□□□ -0.71
APOB-202ENST00000399256 Q6ZUT4 128 aa10.6□□□□□ -0.71
APOB-202ENST00000399256 EEF1AKMT3Q96AZ1 226 aa10.6□□□□□ -0.71
APOB-202ENST00000399256 TCL1BO95988 128 aa10.6□□□□□ -0.71
APOB-202ENST00000399256 CRYGDP07320 174 aa10.6□□□□□ -0.71
APOB-202ENST00000399256 ASIPP42127 132 aa10.6□□□□□ -0.71
APOB-202ENST00000399256 ZFP36P26651 326 aaKnown RBP10.59□□□□□ -0.71
APOB-202ENST00000399256 ANXA2RQ3ZCQ2 193 aa10.59□□□□□ -0.71
APOB-202ENST00000399256 NDUFA11Q86Y39 141 aa10.59□□□□□ -0.71
APOB-202ENST00000399256 Q6ZS46 218 aa10.59□□□□□ -0.71
APOB-202ENST00000399256 ZFAND2AQ8N6M9 145 aa10.59□□□□□ -0.71
APOB-202ENST00000399256 RELNP78509 3460 aa10.59□□□□□ -0.71
APOB-202ENST00000399256 OOSP1A8MZH6 123 aa10.58□□□□□ -0.72
APOB-202ENST00000399256 GNRH2O43555 120 aa10.58□□□□□ -0.72
APOB-202ENST00000399256 MINOS1Q5TGZ0 78 aa10.58□□□□□ -0.72
APOB-202ENST00000399256 MINOS1-NBL1R4GNA1 71 aa10.58□□□□□ -0.72
APOB-202ENST00000399256 A0A0J9YY99 117 aa10.58□□□□□ -0.72
APOB-202ENST00000399256 PPDPFLQ8WWR9 84 aa10.58□□□□□ -0.72
APOB-202ENST00000399256 IGLV4-69A0A075B6H9 119 aa10.58□□□□□ -0.72
APOB-202ENST00000399256 TSHBP01222 138 aa10.58□□□□□ -0.72
APOB-202ENST00000399256 RNASE4P34096 147 aaKnown RBP10.58□□□□□ -0.72
APOB-202ENST00000399256 TEN1Q86WV5 123 aa10.58□□□□□ -0.72
APOB-202ENST00000399256 TP53TG1Q9Y2A0 90 aa10.58□□□□□ -0.72
APOB-202ENST00000399256 ACACBO00763 2458 aa10.57□□□□□ -0.72
APOB-202ENST00000399256 TRAV21A0A0B4J279 112 aa10.57□□□□□ -0.72
APOB-202ENST00000399256 ARL3P36405 182 aa10.57□□□□□ -0.72
APOB-202ENST00000399256 TSPEAR-AS2P59090 65 aa10.57□□□□□ -0.72
APOB-202ENST00000399256 KIR2DL4Q99706 377 aa10.57□□□□□ -0.72
APOB-202ENST00000399256 LINC00527Q9UJ94 153 aa10.57□□□□□ -0.72
APOB-202ENST00000399256 ITLN2Q8WWU7 325 aaPredicted RBP10.57□□□□□ -0.72
APOB-202ENST00000399256 U3KQE9 123 aa10.57□□□□□ -0.72
APOB-202ENST00000399256 ASH1LQ9NR48 2969 aaKnown RBP10.56□□□□□ -0.72
APOB-202ENST00000399256 F6UB75 175 aa10.56□□□□□ -0.72
APOB-202ENST00000399256 RPL39P62891 51 aaKnown RBP10.56□□□□□ -0.72
APOB-202ENST00000399256 GPHB5Q86YW7 130 aa10.56□□□□□ -0.72
APOB-202ENST00000399256 CENPVL3A0A0U1RRI6 287 aa10.56□□□□□ -0.72
APOB-202ENST00000399256 CFC1BP0CG36 223 aa10.56□□□□□ -0.72
APOB-202ENST00000399256 CFC1P0CG37 223 aa10.56□□□□□ -0.72
APOB-202ENST00000399256 SCGB1C2P0DMR2 95 aa10.56□□□□□ -0.72
APOB-202ENST00000399256 LYRM7Q5U5X0 104 aa10.56□□□□□ -0.72
APOB-202ENST00000399256 C9orf139Q6ZV77 190 aa10.56□□□□□ -0.72
APOB-202ENST00000399256 OR10J6PQ8NGY7 276 aa10.56□□□□□ -0.72
APOB-202ENST00000399256 IGKV3-7A0A075B6H7 116 aa10.56□□□□□ -0.72
APOB-202ENST00000399256 TRBV7-1A0A0A6YYK4 115 aa10.56□□□□□ -0.72
APOB-202ENST00000399256 HERVK_113P61574 105 aa10.56□□□□□ -0.72
APOB-202ENST00000399256 TMEM170BQ5T4T1 132 aa10.56□□□□□ -0.72
APOB-202ENST00000399256 ANKRD29Q8N6D5 301 aa10.55□□□□□ -0.72
APOB-202ENST00000399256 A8MWV9 139 aa10.55□□□□□ -0.72
APOB-202ENST00000399256 LINC00477Q96M19 166 aa10.55□□□□□ -0.72
APOB-202ENST00000399256 HRNRQ86YZ3 2850 aaPredicted RBP10.55□□□□□ -0.72
APOB-202ENST00000399256 IGHV3-30P01768 117 aa10.54□□□□□ -0.72
APOB-202ENST00000399256 IGHV3-30-5P0DP03 117 aa10.54□□□□□ -0.72
APOB-202ENST00000399256 LENEPQ9Y5L5 61 aa10.54□□□□□ -0.72
APOB-202ENST00000399256 RNASE3P12724 160 aaKnown RBP10.54□□□□□ -0.72
APOB-202ENST00000399256 UNQ9165/PRO28630Q6UXU0 137 aa10.54□□□□□ -0.72
APOB-202ENST00000399256 C1orf122Q6ZSJ8 110 aa10.54□□□□□ -0.72
APOB-202ENST00000399256 RNF183Q96D59 192 aa10.54□□□□□ -0.72
APOB-202ENST00000399256 SIRPDQ9H106 197 aa10.54□□□□□ -0.72
APOB-202ENST00000399256 JPT2Q9H910 190 aa10.54□□□□□ -0.72
APOB-202ENST00000399256 SAA4P35542 130 aa10.53□□□□□ -0.72
APOB-202ENST00000399256 RPL11P62913 178 aaKnown RBP10.53□□□□□ -0.72
APOB-202ENST00000399256 AJUBAQ96IF1 538 aa10.53□□□□□ -0.72
APOB-202ENST00000399256 ZNF688P0C7X2 276 aa10.53□□□□□ -0.72
APOB-202ENST00000399256 GATA3P23771 443 aa10.53□□□□□ -0.72
APOB-202ENST00000399256 PMVKQ15126 192 aa10.53□□□□□ -0.72
APOB-202ENST00000399256 CDSNQ15517 529 aa10.53□□□□□ -0.72
APOB-202ENST00000399256 C10orf126Q8N4M7 172 aa10.53□□□□□ -0.72
APOB-202ENST00000399256 COL6A6A6NMZ7 2263 aa10.53□□□□□ -0.72
APOB-202ENST00000399256 IGIPA6NJ69 53 aa10.53□□□□□ -0.72
APOB-202ENST00000399256 TRBV12-3P01733 135 aa10.53□□□□□ -0.72
APOB-202ENST00000399256 TMEM219Q86XT9 240 aa10.53□□□□□ -0.72
APOB-202ENST00000399256 RAX2Q96IS3 184 aa10.53□□□□□ -0.72
APOB-202ENST00000399256 TRBV20-1A0A075B6N2 111 aa10.52□□□□□ -0.72
APOB-202ENST00000399256 KLK9Q2XQG4 91 aa10.52□□□□□ -0.72
APOB-202ENST00000399256 KLK9Q9UKQ9 250 aa10.52□□□□□ -0.72
APOB-202ENST00000399256 A0A087WWL8 130 aa10.52□□□□□ -0.73
APOB-202ENST00000399256 H7C2G1 150 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms