RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 SNURFQ9Y675 71 aa3.86□□□□□ -1.79
SMAD4-202ENST00000398417 H3BMM0 161 aa3.86□□□□□ -1.79
SMAD4-202ENST00000398417 NDUFA3O95167 84 aa3.86□□□□□ -1.79
SMAD4-202ENST00000398417 ZFP36P26651 326 aaKnown RBP3.86□□□□□ -1.79
SMAD4-202ENST00000398417 UBE2WQ96B02 151 aa3.86□□□□□ -1.79
SMAD4-202ENST00000398417 TRAV26-2A0A0B4J265 109 aa3.86□□□□□ -1.79
SMAD4-202ENST00000398417 C2orf70A6NJV1 201 aa3.86□□□□□ -1.79
SMAD4-202ENST00000398417 HBDP02042 147 aa3.86□□□□□ -1.79
SMAD4-202ENST00000398417 UBE2BP63146 152 aa3.86□□□□□ -1.79
SMAD4-202ENST00000398417 LDLRAD2Q5SZI1 272 aa3.86□□□□□ -1.79
SMAD4-202ENST00000398417 FAM104BQ5XKR9 115 aa3.86□□□□□ -1.79
SMAD4-202ENST00000398417 A0A1B0GXF2 115 aa3.85□□□□□ -1.79
SMAD4-202ENST00000398417 M0R1W7 72 aa3.85□□□□□ -1.79
SMAD4-202ENST00000398417 TAX1BP3O14907 124 aa3.85□□□□□ -1.79
SMAD4-202ENST00000398417 UCNP55089 124 aa3.85□□□□□ -1.79
SMAD4-202ENST00000398417 ATP5J2P56134 94 aa3.85□□□□□ -1.79
SMAD4-202ENST00000398417 OR11H6Q8NGC7 330 aa3.85□□□□□ -1.79
SMAD4-202ENST00000398417 H7C1H1 209 aa3.85□□□□□ -1.79
SMAD4-202ENST00000398417 SRD5A1P18405 259 aa3.85□□□□□ -1.79
SMAD4-202ENST00000398417 DEFB121Q5J5C9 76 aa3.85□□□□□ -1.79
SMAD4-202ENST00000398417 ORMDL3Q8N138 153 aa3.85□□□□□ -1.79
SMAD4-202ENST00000398417 TMEM86BQ8N661 226 aa3.85□□□□□ -1.79
SMAD4-202ENST00000398417 IFI27L1Q96BM0 104 aa3.85□□□□□ -1.79
SMAD4-202ENST00000398417 DUX3Q96PT4 197 aa3.85□□□□□ -1.79
SMAD4-202ENST00000398417 TTTY13Q9BZ97 58 aa3.85□□□□□ -1.79
SMAD4-202ENST00000398417 C7orf69Q9H7B7 122 aa3.85□□□□□ -1.79
SMAD4-202ENST00000398417 ADGRG4Q8IZF6 3080 aa3.85□□□□□ -1.79
SMAD4-202ENST00000398417 CTRLP40313 264 aa3.85□□□□□ -1.79
SMAD4-202ENST00000398417 ZNF80P51504 273 aaPredicted RBP3.85□□□□□ -1.79
SMAD4-202ENST00000398417 PRSS57Q6UWY2 283 aa3.85□□□□□ -1.79
SMAD4-202ENST00000398417 TTC9CQ8N5M4 171 aa3.85□□□□□ -1.79
SMAD4-202ENST00000398417 LRP4O75096 1905 aa3.85□□□□□ -1.79
SMAD4-202ENST00000398417 M0QXV9 152 aa3.85□□□□□ -1.79
SMAD4-202ENST00000398417 M0R381 172 aa3.85□□□□□ -1.79
SMAD4-202ENST00000398417 PSCAO43653 123 aa3.85□□□□□ -1.79
SMAD4-202ENST00000398417 SNRPD3P62318 126 aaKnown RBP3.85□□□□□ -1.79
SMAD4-202ENST00000398417 RBX1P62877 108 aa3.85□□□□□ -1.79
SMAD4-202ENST00000398417 PRR25Q96S07 402 aa3.85□□□□□ -1.79
SMAD4-202ENST00000398417 ZNF747Q9BV97 191 aa3.85□□□□□ -1.79
SMAD4-202ENST00000398417 BPESC1Q9GZL8 116 aa3.85□□□□□ -1.79
SMAD4-202ENST00000398417 ERG28Q9UKR5 140 aa3.85□□□□□ -1.79
SMAD4-202ENST00000398417 LINC01548A6NM66 108 aa3.85□□□□□ -1.79
SMAD4-202ENST00000398417 NPIPB6E9PJ23 425 aa3.85□□□□□ -1.79
SMAD4-202ENST00000398417 CDSNQ15517 529 aa3.85□□□□□ -1.79
SMAD4-202ENST00000398417 PRR15LQ9BU68 103 aa3.85□□□□□ -1.79
SMAD4-202ENST00000398417 MLST8Q9BVC4 326 aa3.85□□□□□ -1.79
SMAD4-202ENST00000398417 CRPP02741 224 aa3.85□□□□□ -1.79
SMAD4-202ENST00000398417 EGR2P11161 476 aaPredicted RBP3.85□□□□□ -1.79
SMAD4-202ENST00000398417 NBL1P41271 181 aa3.85□□□□□ -1.79
SMAD4-202ENST00000398417 EFNA4P52798 201 aa3.85□□□□□ -1.79
SMAD4-202ENST00000398417 TAL2Q16559 108 aa3.85□□□□□ -1.79
SMAD4-202ENST00000398417 C15orf32Q32M92 178 aa3.85□□□□□ -1.79
SMAD4-202ENST00000398417 HIST2H2BDQ6DRA6 164 aa3.85□□□□□ -1.79
SMAD4-202ENST00000398417 CHTOPQ9Y3Y2 248 aaKnown RBP3.85□□□□□ -1.79
SMAD4-202ENST00000398417 J3KT08 172 aa3.85□□□□□ -1.79
SMAD4-202ENST00000398417 Q6AWC8 147 aa3.85□□□□□ -1.79
SMAD4-202ENST00000398417 GAGE2AQ6NT46 116 aa3.85□□□□□ -1.79
SMAD4-202ENST00000398417 LCNL1Q6ZST4 164 aa3.85□□□□□ -1.79
SMAD4-202ENST00000398417 FANCD2OSQ96PS1 177 aa3.85□□□□□ -1.79
SMAD4-202ENST00000398417 MS4A6AQ9H2W1 248 aa3.85□□□□□ -1.79
SMAD4-202ENST00000398417 HOXB4P17483 251 aaPredicted RBP3.84□□□□□ -1.79
SMAD4-202ENST00000398417 DEFB1P60022 68 aa3.84□□□□□ -1.79
SMAD4-202ENST00000398417 MORN3Q6PF18 240 aaPredicted RBP3.84□□□□□ -1.79
SMAD4-202ENST00000398417 LYPD1Q8N2G4 141 aa3.84□□□□□ -1.79
SMAD4-202ENST00000398417 FAM231BA6NCW3 169 aa3.84□□□□□ -1.79
SMAD4-202ENST00000398417 IL17RELQ6ZVW7 336 aa3.84□□□□□ -1.79
SMAD4-202ENST00000398417 LINC00528Q8N1L1 170 aa3.84□□□□□ -1.79
SMAD4-202ENST00000398417 SLC50A1Q9BRV3 221 aa3.84□□□□□ -1.79
SMAD4-202ENST00000398417 PTPN13Q12923 2485 aa3.84□□□□□ -1.79
SMAD4-202ENST00000398417 IGHV3-64A0A075B6Q5 118 aa3.84□□□□□ -1.79
SMAD4-202ENST00000398417 SMIM9A6NGZ8 99 aa3.84□□□□□ -1.79
SMAD4-202ENST00000398417 AMTNQ6UX39 209 aa3.84□□□□□ -1.79
SMAD4-202ENST00000398417 NPBQ8NG41 125 aa3.84□□□□□ -1.79
SMAD4-202ENST00000398417 AGPAT4-IT1Q9H0P7 198 aa3.84□□□□□ -1.79
SMAD4-202ENST00000398417 ST20Q9HBF5 79 aa3.84□□□□□ -1.79
SMAD4-202ENST00000398417 IGLV11-55A0A075B6I3 123 aa3.84□□□□□ -1.79
SMAD4-202ENST00000398417 TRBV7-9A0A0J9YWB2 115 aa3.84□□□□□ -1.79
SMAD4-202ENST00000398417 DKK2Q9UBU2 259 aa3.84□□□□□ -1.79
SMAD4-202ENST00000398417 MSRB2Q9Y3D2 182 aa3.84□□□□□ -1.79
SMAD4-202ENST00000398417 RIF1Q5UIP0 2472 aaKnown RBP3.84□□□□□ -1.79
SMAD4-202ENST00000398417 SLC25A20O43772 301 aa3.84□□□□□ -1.8
SMAD4-202ENST00000398417 CTSGP08311 255 aa3.84□□□□□ -1.8
SMAD4-202ENST00000398417 CRIP1P50238 77 aa3.84□□□□□ -1.8
SMAD4-202ENST00000398417 IGHV7-81A0A0B4J1V7 117 aa3.84□□□□□ -1.8
SMAD4-202ENST00000398417 TRAV40A0A0B4J280 105 aa3.84□□□□□ -1.8
SMAD4-202ENST00000398417 LY6LH3BQJ8 138 aa3.84□□□□□ -1.8
SMAD4-202ENST00000398417 CCL25O15444 150 aa3.84□□□□□ -1.8
SMAD4-202ENST00000398417 ASIPP42127 132 aa3.84□□□□□ -1.8
SMAD4-202ENST00000398417 SMAD5-AS1Q9Y6J3 95 aa3.84□□□□□ -1.8
SMAD4-202ENST00000398417 NEGR1Q7Z3B1 354 aa3.83□□□□□ -1.8
SMAD4-202ENST00000398417 PRSS22Q9GZN4 317 aa3.83□□□□□ -1.8
SMAD4-202ENST00000398417 CELSR1Q9NYQ6 3014 aa3.83□□□□□ -1.8
SMAD4-202ENST00000398417 K7EMI3 77 aa3.83□□□□□ -1.8
SMAD4-202ENST00000398417 FSHBP01225 129 aa3.83□□□□□ -1.8
SMAD4-202ENST00000398417 AJUBAQ96IF1 538 aa3.83□□□□□ -1.8
SMAD4-202ENST00000398417 SIRPDQ9H106 197 aa3.83□□□□□ -1.8
SMAD4-202ENST00000398417 TMEM238C9JI98 176 aa3.83□□□□□ -1.8
SMAD4-202ENST00000398417 MINOS1Q5TGZ0 78 aa3.83□□□□□ -1.8
SMAD4-202ENST00000398417 C1QTNF4Q9BXJ3 329 aa3.83□□□□□ -1.8
SMAD4-202ENST00000398417 MINOS1-NBL1R4GNA1 71 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms