RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 KPRPQ5T749 579 aaPredicted RBP3.04□□□□□ -1.92
GABPB1-204ENST00000396464 Q6ZS52 159 aa3.04□□□□□ -1.92
GABPB1-204ENST00000396464 Q8N814 137 aa3.04□□□□□ -1.92
GABPB1-204ENST00000396464 LINC00467Q9BRT7 94 aa3.04□□□□□ -1.92
GABPB1-204ENST00000396464 LY96Q9Y6Y9 160 aa3.04□□□□□ -1.92
GABPB1-204ENST00000396464 IGHV1-18A0A0C4DH31 117 aa3.03□□□□□ -1.92
GABPB1-204ENST00000396464 HYPMO75409 117 aa3.03□□□□□ -1.92
GABPB1-204ENST00000396464 ROMO1P60602 79 aa3.03□□□□□ -1.92
GABPB1-204ENST00000396464 NNATQ16517 81 aa3.03□□□□□ -1.92
GABPB1-204ENST00000396464 SH2D6Q7Z4S9 175 aa3.03□□□□□ -1.92
GABPB1-204ENST00000396464 OR4X2Q8NGF9 303 aa3.03□□□□□ -1.92
GABPB1-204ENST00000396464 RAB37Q96AX2 223 aa3.03□□□□□ -1.92
GABPB1-204ENST00000396464 HHLA3Q9XRX5 114 aa3.03□□□□□ -1.92
GABPB1-204ENST00000396464 KIF25-AS1Q9Y6Z4 181 aa3.03□□□□□ -1.92
GABPB1-204ENST00000396464 PHIPQ8WWQ0 1821 aa3.03□□□□□ -1.92
GABPB1-204ENST00000396464 ALPK3Q96L96 1907 aa3.03□□□□□ -1.92
GABPB1-204ENST00000396464 IGKV2D-26A0A0A0MRZ7 120 aa3.02□□□□□ -1.93
GABPB1-204ENST00000396464 C3orf85A0A1B0GTC6 90 aa3.02□□□□□ -1.93
GABPB1-204ENST00000396464 UBA52P62987 128 aaKnown RBP3.02□□□□□ -1.93
GABPB1-204ENST00000396464 Q6AWC8 147 aa3.02□□□□□ -1.93
GABPB1-204ENST00000396464 Q6ZS92 163 aa3.02□□□□□ -1.93
GABPB1-204ENST00000396464 SLC35E3Q7Z769 313 aa3.02□□□□□ -1.93
GABPB1-204ENST00000396464 HYLS1Q96M11 299 aa3.02□□□□□ -1.93
GABPB1-204ENST00000396464 IGKV1D-42A0A075B6H8 117 aa3.02□□□□□ -1.93
GABPB1-204ENST00000396464 MUC21A0A0G2JKD1 596 aa3.02□□□□□ -1.93
GABPB1-204ENST00000396464 A0A1W2PRS3 328 aa3.02□□□□□ -1.93
GABPB1-204ENST00000396464 OR51F1A6NGY5 319 aa3.02□□□□□ -1.93
GABPB1-204ENST00000396464 RPL36A-HNRNPH2H7BZ11 118 aa3.02□□□□□ -1.93
GABPB1-204ENST00000396464 ASB16-AS1Q495Z4 193 aa3.02□□□□□ -1.93
GABPB1-204ENST00000396464 C1orf134Q5TEV5 83 aa3.02□□□□□ -1.93
GABPB1-204ENST00000396464 ATP11AUNQ6ZP68 121 aa3.02□□□□□ -1.93
GABPB1-204ENST00000396464 CST11Q9H112 138 aa3.02□□□□□ -1.93
GABPB1-204ENST00000396464 LOC285556D6RIA3 1793 aa3.01□□□□□ -1.93
GABPB1-204ENST00000396464 SSC5DA1L4H1 1573 aa3.01□□□□□ -1.93
GABPB1-204ENST00000396464 PLXNB2O15031 1838 aa3.01□□□□□ -1.93
GABPB1-204ENST00000396464 COL11A1P12107 1806 aaPredicted RBP3.01□□□□□ -1.93
GABPB1-204ENST00000396464 IGLV3-12A0A075B6K2 115 aa3.01□□□□□ -1.93
GABPB1-204ENST00000396464 IGHV1-24A0A0C4DH33 117 aa3.01□□□□□ -1.93
GABPB1-204ENST00000396464 TCRBV3S1A0A5B6 114 aa3.01□□□□□ -1.93
GABPB1-204ENST00000396464 hDV103S1A0JD37 113 aa3.01□□□□□ -1.93
GABPB1-204ENST00000396464 C17orf112F2Z3M2 114 aa3.01□□□□□ -1.93
GABPB1-204ENST00000396464 MGST1P10620 155 aaKnown RBP3.01□□□□□ -1.93
GABPB1-204ENST00000396464 ETV6P41212 452 aa3.01□□□□□ -1.93
GABPB1-204ENST00000396464 ZNF846Q147U1 533 aa3.01□□□□□ -1.93
GABPB1-204ENST00000396464 LINC00483Q53H64 154 aa3.01□□□□□ -1.93
GABPB1-204ENST00000396464 PYY3Q5JQD4 70 aa3.01□□□□□ -1.93
GABPB1-204ENST00000396464 FP248Q71RG6 208 aaPredicted RBP3.01□□□□□ -1.93
GABPB1-204ENST00000396464 OR2T35Q8NGX2 323 aa3.01□□□□□ -1.93
GABPB1-204ENST00000396464 CXCL16Q9H2A7 254 aa3.01□□□□□ -1.93
GABPB1-204ENST00000396464 PRO1933Q9H354 126 aa3.01□□□□□ -1.93
GABPB1-204ENST00000396464 NOP16Q9Y3C1 178 aaKnown RBP3.01□□□□□ -1.93
GABPB1-204ENST00000396464 PLIN4Q96Q06 1357 aa3□□□□□ -1.93
GABPB1-204ENST00000396464 PTPRFP10586 1907 aa3□□□□□ -1.93
GABPB1-204ENST00000396464 LOC107984156A0A0G2JMH3 177 aa3□□□□□ -1.93
GABPB1-204ENST00000396464 COLCA2A8K830 154 aa3□□□□□ -1.93
GABPB1-204ENST00000396464 TMEM262E9PQX1 116 aa3□□□□□ -1.93
GABPB1-204ENST00000396464 M0R233 179 aa3□□□□□ -1.93
GABPB1-204ENST00000396464 ARL17AQ8IVW1 177 aa3□□□□□ -1.93
GABPB1-204ENST00000396464 PSMF1Q92530 271 aa3□□□□□ -1.93
GABPB1-204ENST00000396464 SLC50A1Q9BRV3 221 aa3□□□□□ -1.93
GABPB1-204ENST00000396464 DPY30Q9C005 99 aa3□□□□□ -1.93
GABPB1-204ENST00000396464 TRPM6Q9BX84 2022 aa3□□□□□ -1.93
GABPB1-204ENST00000396464 PTPRBP23467 1997 aa2.99□□□□□ -1.93
GABPB1-204ENST00000396464 MALRD1Q5VYJ5 2156 aa2.99□□□□□ -1.93
GABPB1-204ENST00000396464 IGHV3-64A0A075B6Q5 118 aa2.99□□□□□ -1.93
GABPB1-204ENST00000396464 ZNF705FA8MVS1 300 aaPredicted RBP2.99□□□□□ -1.93
GABPB1-204ENST00000396464 CRPP02741 224 aa2.99□□□□□ -1.93
GABPB1-204ENST00000396464 OR2T2Q6IF00 324 aa2.99□□□□□ -1.93
GABPB1-204ENST00000396464 TMEM136Q6ZRR5 245 aa2.99□□□□□ -1.93
GABPB1-204ENST00000396464 ATP6V0E2Q8NHE4 81 aa2.99□□□□□ -1.93
GABPB1-204ENST00000396464 C10orf105Q8TEF2 133 aa2.99□□□□□ -1.93
GABPB1-204ENST00000396464 C20orf166-AS1Q96NR2 134 aa2.99□□□□□ -1.93
GABPB1-204ENST00000396464 A0A0G2JMZ2 1700 aa2.98□□□□□ -1.93
GABPB1-204ENST00000396464 PARP14Q460N5 1801 aa2.98□□□□□ -1.93
GABPB1-204ENST00000396464 COL27A1Q8IZC6 1860 aaPredicted RBP2.98□□□□□ -1.93
GABPB1-204ENST00000396464 HELZP42694 1942 aaKnown RBP2.98□□□□□ -1.93
GABPB1-204ENST00000396464 A0A0J9YX75 114 aa2.98□□□□□ -1.93
GABPB1-204ENST00000396464 EDF1O60869 148 aaKnown RBP2.98□□□□□ -1.93
GABPB1-204ENST00000396464 MDKP21741 143 aaPredicted RBP2.98□□□□□ -1.93
GABPB1-204ENST00000396464 SPINT4Q6UDR6 99 aa2.98□□□□□ -1.93
GABPB1-204ENST00000396464 FAM19A2Q8N3H0 131 aa2.98□□□□□ -1.93
GABPB1-204ENST00000396464 Q96M85 177 aa2.98□□□□□ -1.93
GABPB1-204ENST00000396464 AQP10Q96PS8 301 aa2.98□□□□□ -1.93
GABPB1-204ENST00000396464 MGAMO43451 1857 aa2.98□□□□□ -1.93
GABPB1-204ENST00000396464 PLXNA1Q9UIW2 1896 aa2.98□□□□□ -1.93
GABPB1-204ENST00000396464 CROCCQ5TZA2 2017 aa2.97□□□□□ -1.93
GABPB1-204ENST00000396464 E7EQL1 145 aa2.97□□□□□ -1.93
GABPB1-204ENST00000396464 H3BQF6 201 aa2.97□□□□□ -1.93
GABPB1-204ENST00000396464 GYPBP06028 91 aa2.97□□□□□ -1.93
GABPB1-204ENST00000396464 ZNF345Q14585 488 aa2.97□□□□□ -1.93
GABPB1-204ENST00000396464 LINC00301Q8NCQ3 95 aa2.97□□□□□ -1.93
GABPB1-204ENST00000396464 DSCR8Q96T75 97 aa2.97□□□□□ -1.93
GABPB1-204ENST00000396464 SCRT1Q9BWW7 348 aa2.97□□□□□ -1.93
GABPB1-204ENST00000396464 C14orf132Q9NPU4 83 aa2.97□□□□□ -1.93
GABPB1-204ENST00000396464 RPS10P5Q9NQ39 176 aa2.97□□□□□ -1.93
GABPB1-204ENST00000396464 KLK12Q9UKR0 248 aa2.97□□□□□ -1.93
GABPB1-204ENST00000396464 TRAV1-1A0A0B4J248 108 aa2.96□□□□□ -1.94
GABPB1-204ENST00000396464 IL5P05113 134 aa2.96□□□□□ -1.94
GABPB1-204ENST00000396464 NPC2P61916 151 aa2.96□□□□□ -1.94
GABPB1-204ENST00000396464 ZNF826PQ6ZT77 177 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms