RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 PRADC1Q9BSG0 188 aa12.69□□□□□ -0.38
SNX9-201ENST00000392185 PCSK5Q92824 1860 aa12.68□□□□□ -0.38
SNX9-201ENST00000392185 ADARB2-AS1A8MUL3 147 aa12.68□□□□□ -0.38
SNX9-201ENST00000392185 Q6ZS46 218 aa12.68□□□□□ -0.38
SNX9-201ENST00000392185 MRPL16Q9NX20 251 aaKnown RBP12.68□□□□□ -0.38
SNX9-201ENST00000392185 ZNF815PA8K554 130 aa12.68□□□□□ -0.38
SNX9-201ENST00000392185 H3BRM9 83 aa12.68□□□□□ -0.38
SNX9-201ENST00000392185 TMEM61Q8N0U2 210 aa12.67□□□□□ -0.38
SNX9-201ENST00000392185 C2orf66Q6UXQ4 117 aa12.67□□□□□ -0.38
SNX9-201ENST00000392185 FOXI2Q6ZQN5 318 aa12.67□□□□□ -0.38
SNX9-201ENST00000392185 GTSF1Q8WW33 167 aa12.67□□□□□ -0.38
SNX9-201ENST00000392185 OR13C6PQ8NH95 151 aa12.67□□□□□ -0.38
SNX9-201ENST00000392185 NHP2Q9NX24 153 aaKnown RBP12.67□□□□□ -0.38
SNX9-201ENST00000392185 TRAV13-1A0A0B4J241 112 aa12.66□□□□□ -0.38
SNX9-201ENST00000392185 GPHB5Q86YW7 130 aa12.66□□□□□ -0.38
SNX9-201ENST00000392185 MAP1AP78559 2803 aaPredicted RBP12.66□□□□□ -0.38
SNX9-201ENST00000392185 AZU1P20160 251 aa12.66□□□□□ -0.38
SNX9-201ENST00000392185 SRSF2Q01130 221 aaKnown RBP12.66□□□□□ -0.38
SNX9-201ENST00000392185 KLF12Q9Y4X4 402 aa12.66□□□□□ -0.38
SNX9-201ENST00000392185 NUPR1O60356 82 aa12.66□□□□□ -0.38
SNX9-201ENST00000392185 MRPL53Q96EL3 112 aaKnown RBP12.66□□□□□ -0.38
SNX9-201ENST00000392185 TP53TG1Q9Y2A0 90 aa12.65□□□□□ -0.38
SNX9-201ENST00000392185 F8P00451 2351 aa12.65□□□□□ -0.38
SNX9-201ENST00000392185 SMIM13P0DJ93 91 aa12.65□□□□□ -0.38
SNX9-201ENST00000392185 LINC00322Q6ZN03 302 aaPredicted RBP12.65□□□□□ -0.38
SNX9-201ENST00000392185 COL6A3P12111 3177 aa12.65□□□□□ -0.38
SNX9-201ENST00000392185 IGHV1-24A0A0C4DH33 117 aa12.65□□□□□ -0.38
SNX9-201ENST00000392185 IGHG4P01861 327 aa12.65□□□□□ -0.38
SNX9-201ENST00000392185 IGF1P05019 195 aa12.65□□□□□ -0.38
SNX9-201ENST00000392185 LENEPQ9Y5L5 61 aa12.65□□□□□ -0.38
SNX9-201ENST00000392185 RAI1Q7Z5J4 1906 aaPredicted RBP12.65□□□□□ -0.39
SNX9-201ENST00000392185 COX6CP09669 75 aa12.64□□□□□ -0.39
SNX9-201ENST00000392185 LRRC75A-AS1Q8N1F1 130 aa12.64□□□□□ -0.39
SNX9-201ENST00000392185 ZNF48Q96MX3 618 aaPredicted RBP12.64□□□□□ -0.39
SNX9-201ENST00000392185 A0A087X0K7 114 aa12.64□□□□□ -0.39
SNX9-201ENST00000392185 TRPT1Q86TN4 253 aaKnown RBP12.64□□□□□ -0.39
SNX9-201ENST00000392185 ZNRF2Q8NHG8 242 aa12.64□□□□□ -0.39
SNX9-201ENST00000392185 PTPRBP23467 1997 aa12.64□□□□□ -0.39
SNX9-201ENST00000392185 RBAKDNA6NC62 111 aa12.64□□□□□ -0.39
SNX9-201ENST00000392185 DLX4Q92988 240 aaPredicted RBP12.64□□□□□ -0.39
SNX9-201ENST00000392185 SPAG8Q99932 426 aaPredicted RBP12.64□□□□□ -0.39
SNX9-201ENST00000392185 NAA38Q9BRA0 125 aaKnown RBP12.64□□□□□ -0.39
SNX9-201ENST00000392185 TNRC6BQ9UPQ9 1833 aaKnown RBP12.64□□□□□ -0.39
SNX9-201ENST00000392185 POLR3KQ9Y2Y1 108 aaPredicted RBP12.63□□□□□ -0.39
SNX9-201ENST00000392185 NDUFS6O75380 124 aaKnown RBP12.63□□□□□ -0.39
SNX9-201ENST00000392185 Q6YL49 198 aa12.63□□□□□ -0.39
SNX9-201ENST00000392185 TEX43Q6ZNM6 134 aa12.63□□□□□ -0.39
SNX9-201ENST00000392185 TRAV2A0A0B4J234 112 aa12.62□□□□□ -0.39
SNX9-201ENST00000392185 K7EMT4 169 aa12.62□□□□□ -0.39
SNX9-201ENST00000392185 OR5A1Q8NGJ0 315 aa12.62□□□□□ -0.39
SNX9-201ENST00000392185 SMIM2Q9BVW6 85 aa12.62□□□□□ -0.39
SNX9-201ENST00000392185 RHODO00212 210 aa12.62□□□□□ -0.39
SNX9-201ENST00000392185 Q8N8P6 123 aa12.62□□□□□ -0.39
SNX9-201ENST00000392185 A8MWV9 139 aa12.62□□□□□ -0.39
SNX9-201ENST00000392185 F5H768 121 aa12.62□□□□□ -0.39
SNX9-201ENST00000392185 Q8N6K4 173 aa12.62□□□□□ -0.39
SNX9-201ENST00000392185 C11orf68Q9H3H3 251 aaKnown RBP12.62□□□□□ -0.39
SNX9-201ENST00000392185 CDPF1Q6NVV7 123 aa12.61□□□□□ -0.39
SNX9-201ENST00000392185 SPXQ9BT56 116 aa12.61□□□□□ -0.39
SNX9-201ENST00000392185 H3BUT2 72 aa12.61□□□□□ -0.39
SNX9-201ENST00000392185 NOP10Q9NPE3 64 aaKnown RBP12.61□□□□□ -0.39
SNX9-201ENST00000392185 INAFM1C9JVW0 142 aa12.6□□□□□ -0.39
SNX9-201ENST00000392185 ZNF80P51504 273 aaPredicted RBP12.6□□□□□ -0.39
SNX9-201ENST00000392185 MPV17L2Q567V2 206 aa12.6□□□□□ -0.39
SNX9-201ENST00000392185 A0A096LPF7 62 aa12.6□□□□□ -0.39
SNX9-201ENST00000392185 IGLV2-8P01709 118 aa12.6□□□□□ -0.39
SNX9-201ENST00000392185 U3KQE9 123 aa12.6□□□□□ -0.39
SNX9-201ENST00000392185 NPC2P61916 151 aa12.59□□□□□ -0.39
SNX9-201ENST00000392185 MALP21145 153 aa12.59□□□□□ -0.39
SNX9-201ENST00000392185 CFAP46Q8IYW2 2715 aa12.59□□□□□ -0.39
SNX9-201ENST00000392185 DAD1P61803 113 aa12.59□□□□□ -0.39
SNX9-201ENST00000392185 RPL39LQ96EH5 51 aaKnown RBP12.59□□□□□ -0.39
SNX9-201ENST00000392185 CLPSL1A2RUU4 121 aa12.58□□□□□ -0.4
SNX9-201ENST00000392185 RNASE1P07998 156 aaKnown RBP12.58□□□□□ -0.4
SNX9-201ENST00000392185 LINC01549A6NIU2 74 aa12.58□□□□□ -0.4
SNX9-201ENST00000392185 C9orf47Q6ZRZ4 202 aa12.58□□□□□ -0.4
SNX9-201ENST00000392185 Q6ZSV7 163 aa12.58□□□□□ -0.4
SNX9-201ENST00000392185 RNASE13Q5GAN3 156 aaKnown RBP12.58□□□□□ -0.4
SNX9-201ENST00000392185 Q8N1Y9 231 aa12.58□□□□□ -0.4
SNX9-201ENST00000392185 DPH3Q96FX2 82 aa12.58□□□□□ -0.4
SNX9-201ENST00000392185 PLA2G2AP14555 144 aa12.57□□□□□ -0.4
SNX9-201ENST00000392185 CFAP161Q6P656 301 aa12.57□□□□□ -0.4
SNX9-201ENST00000392185 ZFAND3Q9H8U3 227 aa12.57□□□□□ -0.4
SNX9-201ENST00000392185 CELSR3Q9NYQ7 3312 aa12.57□□□□□ -0.4
SNX9-201ENST00000392185 LINC01559Q495D7 138 aa12.57□□□□□ -0.4
SNX9-201ENST00000392185 LINC00173Q6ZV60 143 aa12.57□□□□□ -0.4
SNX9-201ENST00000392185 ZNF625Q96I27 306 aaPredicted RBP12.57□□□□□ -0.4
SNX9-201ENST00000392185 PLNP26678 52 aa12.56□□□□□ -0.4
SNX9-201ENST00000392185 MRPL35Q9NZE8 188 aaKnown RBP12.56□□□□□ -0.4
SNX9-201ENST00000392185 ADAMTSL5Q6ZMM2 481 aa12.56□□□□□ -0.4
SNX9-201ENST00000392185 ORAOV1Q8WV07 137 aa12.56□□□□□ -0.4
SNX9-201ENST00000392185 TMEM89A2RUT3 159 aa12.56□□□□□ -0.4
SNX9-201ENST00000392185 C19orf71A6NCJ1 209 aa12.56□□□□□ -0.4
SNX9-201ENST00000392185 I3L3M4 83 aa12.55□□□□□ -0.4
SNX9-201ENST00000392185 IGLL1P15814 213 aa12.55□□□□□ -0.4
SNX9-201ENST00000392185 MAJINQ3KP22 176 aa12.55□□□□□ -0.4
SNX9-201ENST00000392185 M0R2P5 195 aa12.55□□□□□ -0.4
SNX9-201ENST00000392185 CRPP02741 224 aa12.55□□□□□ -0.4
SNX9-201ENST00000392185 SMR3AQ99954 134 aa12.54□□□□□ -0.4
SNX9-201ENST00000392185 JPT2Q9H910 190 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 263.2 ms