RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 RPL39P62891 51 aaKnown RBP3.9□□□□□ -1.78
LTN1-202ENST00000389194 LINC01356Q8N9X3 169 aa3.9□□□□□ -1.78
LTN1-202ENST00000389194 TET2Q6N021 2002 aaPredicted RBP3.9□□□□□ -1.78
LTN1-202ENST00000389194 TRIOO75962 3097 aa3.9□□□□□ -1.78
LTN1-202ENST00000389194 IGHV4-30-2A0A087WSY4 118 aa3.9□□□□□ -1.78
LTN1-202ENST00000389194 K7EIM0 57 aa3.9□□□□□ -1.78
LTN1-202ENST00000389194 COX8AP10176 69 aa3.9□□□□□ -1.78
LTN1-202ENST00000389194 ZFP36P26651 326 aaKnown RBP3.9□□□□□ -1.78
LTN1-202ENST00000389194 CRIP3Q6Q6R5 217 aa3.9□□□□□ -1.78
LTN1-202ENST00000389194 ODF3L1Q8IXM7 274 aa3.9□□□□□ -1.78
LTN1-202ENST00000389194 USMG5Q96IX5 58 aa3.9□□□□□ -1.78
LTN1-202ENST00000389194 K7EP13 123 aa3.9□□□□□ -1.79
LTN1-202ENST00000389194 DEFB4AO15263 64 aa3.9□□□□□ -1.79
LTN1-202ENST00000389194 LHBP01229 141 aa3.9□□□□□ -1.79
LTN1-202ENST00000389194 AZU1P20160 251 aa3.9□□□□□ -1.79
LTN1-202ENST00000389194 PDE6HQ13956 83 aa3.9□□□□□ -1.79
LTN1-202ENST00000389194 LINC00322Q6ZN03 302 aaPredicted RBP3.9□□□□□ -1.79
LTN1-202ENST00000389194 COPS9Q8WXC6 57 aa3.9□□□□□ -1.79
LTN1-202ENST00000389194 EDA2RQ9HAV5 297 aa3.9□□□□□ -1.79
LTN1-202ENST00000389194 FAM223BA6NKX1 122 aa3.9□□□□□ -1.79
LTN1-202ENST00000389194 LTAP01374 205 aa3.9□□□□□ -1.79
LTN1-202ENST00000389194 LOXL1Q08397 574 aaPredicted RBP3.9□□□□□ -1.79
LTN1-202ENST00000389194 ATXN8Q156A1 80 aa3.9□□□□□ -1.79
LTN1-202ENST00000389194 FAM223AQ8IWN6 122 aa3.9□□□□□ -1.79
LTN1-202ENST00000389194 SZT2Q5T011 3432 aa3.9□□□□□ -1.79
LTN1-202ENST00000389194 FNDC10F2Z333 226 aa3.9□□□□□ -1.79
LTN1-202ENST00000389194 BRWD1-AS2P59051 145 aa3.9□□□□□ -1.79
LTN1-202ENST00000389194 Q8N8P6 123 aa3.9□□□□□ -1.79
LTN1-202ENST00000389194 ZNF747Q9BV97 191 aa3.9□□□□□ -1.79
LTN1-202ENST00000389194 GFRA4Q9GZZ7 299 aa3.9□□□□□ -1.79
LTN1-202ENST00000389194 ZNF492Q9P255 531 aa3.9□□□□□ -1.79
LTN1-202ENST00000389194 SMPXQ9UHP9 88 aa3.9□□□□□ -1.79
LTN1-202ENST00000389194 IGHV4-4A0A075B6R2 117 aa3.9□□□□□ -1.79
LTN1-202ENST00000389194 MYMXA0A1B0GTQ4 84 aa3.9□□□□□ -1.79
LTN1-202ENST00000389194 TINCRA0A1B0GVN0 87 aa3.9□□□□□ -1.79
LTN1-202ENST00000389194 ZFAND6Q6FIF0 208 aa3.9□□□□□ -1.79
LTN1-202ENST00000389194 FAM167A-AS1Q96KT0 104 aa3.9□□□□□ -1.79
LTN1-202ENST00000389194 IGLV10-54A0A075B6I4 117 aa3.89□□□□□ -1.79
LTN1-202ENST00000389194 IGHV7-81A0A0B4J1V7 117 aa3.89□□□□□ -1.79
LTN1-202ENST00000389194 C9orf118A6NHY6 69 aa3.89□□□□□ -1.79
LTN1-202ENST00000389194 PRSS29PA6NIE9 313 aa3.89□□□□□ -1.79
LTN1-202ENST00000389194 NDUFS8O00217 210 aa3.89□□□□□ -1.79
LTN1-202ENST00000389194 ITGB1BP1O14713 200 aa3.89□□□□□ -1.79
LTN1-202ENST00000389194 LY6G5BQ8NDX9 201 aa3.89□□□□□ -1.79
LTN1-202ENST00000389194 MRAPQ8TCY5 172 aa3.89□□□□□ -1.79
LTN1-202ENST00000389194 C11orf52Q96A22 123 aa3.89□□□□□ -1.79
LTN1-202ENST00000389194 OPRPNQ99935 248 aaPredicted RBP3.89□□□□□ -1.79
LTN1-202ENST00000389194 NOP10Q9NPE3 64 aaKnown RBP3.89□□□□□ -1.79
LTN1-202ENST00000389194 IGHV1OR15-1A0A075B7D0 117 aa3.89□□□□□ -1.79
LTN1-202ENST00000389194 MORN3Q6PF18 240 aaPredicted RBP3.89□□□□□ -1.79
LTN1-202ENST00000389194 THAP8Q8NA92 274 aa3.89□□□□□ -1.79
LTN1-202ENST00000389194 Q8NFD4 153 aa3.89□□□□□ -1.79
LTN1-202ENST00000389194 TNRC6BQ9UPQ9 1833 aaKnown RBP3.89□□□□□ -1.79
LTN1-202ENST00000389194 CDKN1BP46527 198 aa3.89□□□□□ -1.79
LTN1-202ENST00000389194 IGFL3Q6UXB1 125 aa3.89□□□□□ -1.79
LTN1-202ENST00000389194 Q6ZQT7 251 aa3.89□□□□□ -1.79
LTN1-202ENST00000389194 TMEM86BQ8N661 226 aa3.89□□□□□ -1.79
LTN1-202ENST00000389194 C3orf56Q8N813 242 aa3.89□□□□□ -1.79
LTN1-202ENST00000389194 SMIM2Q9BVW6 85 aa3.89□□□□□ -1.79
LTN1-202ENST00000389194 OOSP1A8MZH6 123 aa3.89□□□□□ -1.79
LTN1-202ENST00000389194 SLC25A20O43772 301 aa3.89□□□□□ -1.79
LTN1-202ENST00000389194 PMVKQ15126 192 aa3.89□□□□□ -1.79
LTN1-202ENST00000389194 ZNF295-AS1Q8N0V1 137 aa3.89□□□□□ -1.79
LTN1-202ENST00000389194 GP9P14770 177 aa3.89□□□□□ -1.79
LTN1-202ENST00000389194 PIP4P1Q86T03 277 aa3.89□□□□□ -1.79
LTN1-202ENST00000389194 RNASE8Q8TDE3 154 aaKnown RBP3.89□□□□□ -1.79
LTN1-202ENST00000389194 IGF2BP2-AS1Q96M15 143 aa3.89□□□□□ -1.79
LTN1-202ENST00000389194 TRBV20-1A0A075B6N2 111 aa3.88□□□□□ -1.79
LTN1-202ENST00000389194 RBAKDNA6NC62 111 aa3.88□□□□□ -1.79
LTN1-202ENST00000389194 I3L2K1 104 aa3.88□□□□□ -1.79
LTN1-202ENST00000389194 PRB2P02812 416 aaPredicted RBP3.88□□□□□ -1.79
LTN1-202ENST00000389194 CTSGP08311 255 aa3.88□□□□□ -1.79
LTN1-202ENST00000389194 XCL1P47992 114 aa3.88□□□□□ -1.79
LTN1-202ENST00000389194 WFDC11Q8NEX6 87 aa3.88□□□□□ -1.79
LTN1-202ENST00000389194 PLEKHB2Q96CS7 222 aa3.88□□□□□ -1.79
LTN1-202ENST00000389194 A0A1W2PPM0 123 aa3.88□□□□□ -1.79
LTN1-202ENST00000389194 UNQ9165/PRO28630Q6UXU0 137 aa3.88□□□□□ -1.79
LTN1-202ENST00000389194 FAM231DQ6ZW35 169 aa3.88□□□□□ -1.79
LTN1-202ENST00000389194 TRPT1Q86TN4 253 aaKnown RBP3.88□□□□□ -1.79
LTN1-202ENST00000389194 AJUBAQ96IF1 538 aa3.88□□□□□ -1.79
LTN1-202ENST00000389194 NDUFA12Q9UI09 145 aa3.88□□□□□ -1.79
LTN1-202ENST00000389194 EXPH5Q8NEV8 1989 aa3.88□□□□□ -1.79
LTN1-202ENST00000389194 HIST2H2BCQ6DN03 193 aa3.88□□□□□ -1.79
LTN1-202ENST00000389194 C5orf38Q86SI9 138 aa3.88□□□□□ -1.79
LTN1-202ENST00000389194 ZNF503Q96F45 646 aa3.88□□□□□ -1.79
LTN1-202ENST00000389194 CENPVL3A0A0U1RRI6 287 aa3.88□□□□□ -1.79
LTN1-202ENST00000389194 CEMP1Q6PRD7 247 aaPredicted RBP3.88□□□□□ -1.79
LTN1-202ENST00000389194 CEND1Q8N111 149 aa3.88□□□□□ -1.79
LTN1-202ENST00000389194 I3L3M4 83 aa3.88□□□□□ -1.79
LTN1-202ENST00000389194 FXYD2P54710 66 aa3.88□□□□□ -1.79
LTN1-202ENST00000389194 SRSF2Q01130 221 aaKnown RBP3.88□□□□□ -1.79
LTN1-202ENST00000389194 KRTAP27-1Q3LI81 207 aa3.88□□□□□ -1.79
LTN1-202ENST00000389194 F8VRH5 84 aa3.88□□□□□ -1.79
LTN1-202ENST00000389194 IGF1P05019 195 aa3.88□□□□□ -1.79
LTN1-202ENST00000389194 LINC00311Q8N616 119 aa3.88□□□□□ -1.79
LTN1-202ENST00000389194 IGHV7-4-1A0A0J9YVY3 117 aa3.87□□□□□ -1.79
LTN1-202ENST00000389194 LINC01619G3V211 115 aa3.87□□□□□ -1.79
LTN1-202ENST00000389194 LEPROTO15243 131 aa3.87□□□□□ -1.79
LTN1-202ENST00000389194 Q8N7P7 452 aa3.87□□□□□ -1.79
LTN1-202ENST00000389194 RNF138Q8WVD3 245 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms