RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 LINC00526Q96FQ7 95 aa11.58□□□□□ -0.56
VLDLR-202ENST00000382099 SPRY2O43597 315 aa11.57□□□□□ -0.56
VLDLR-202ENST00000382099 IGHG4P01861 327 aa11.57□□□□□ -0.56
VLDLR-202ENST00000382099 COX6B1P14854 86 aa11.57□□□□□ -0.56
VLDLR-202ENST00000382099 OTOGLQ3ZCN5 2332 aa11.57□□□□□ -0.56
VLDLR-202ENST00000382099 NTN3O00634 580 aaPredicted RBP11.57□□□□□ -0.56
VLDLR-202ENST00000382099 ERCC8Q13216 396 aa11.57□□□□□ -0.56
VLDLR-202ENST00000382099 LYPD1Q8N2G4 141 aa11.57□□□□□ -0.56
VLDLR-202ENST00000382099 DEFB123Q8N688 67 aa11.57□□□□□ -0.56
VLDLR-202ENST00000382099 SMIM2Q9BVW6 85 aa11.57□□□□□ -0.56
VLDLR-202ENST00000382099 IGF2RP11717 2491 aa11.56□□□□□ -0.56
VLDLR-202ENST00000382099 ORMDL2Q53FV1 153 aa11.56□□□□□ -0.56
VLDLR-202ENST00000382099 RNF125Q96EQ8 232 aa11.56□□□□□ -0.56
VLDLR-202ENST00000382099 IGHV3OR16-8A0A075B7F1 116 aa11.56□□□□□ -0.56
VLDLR-202ENST00000382099 TRAV8-3A0A0A6YYJ7 113 aa11.56□□□□□ -0.56
VLDLR-202ENST00000382099 TRBV7-7A0A0K0K1E9 115 aa11.56□□□□□ -0.56
VLDLR-202ENST00000382099 A0A1B0GX51 115 aa11.56□□□□□ -0.56
VLDLR-202ENST00000382099 A0A1W2PNU3 283 aaPredicted RBP11.56□□□□□ -0.56
VLDLR-202ENST00000382099 RS1O15537 224 aa11.56□□□□□ -0.56
VLDLR-202ENST00000382099 IGHV1-2P23083 117 aa11.56□□□□□ -0.56
VLDLR-202ENST00000382099 MUSTN1Q8IVN3 82 aa11.56□□□□□ -0.56
VLDLR-202ENST00000382099 SLC25A29Q8N8R3 303 aa11.56□□□□□ -0.56
VLDLR-202ENST00000382099 NRACQ8N912 160 aa11.56□□□□□ -0.56
VLDLR-202ENST00000382099 DSCR8Q96T75 97 aa11.56□□□□□ -0.56
VLDLR-202ENST00000382099 LY6DQ14210 128 aa11.56□□□□□ -0.56
VLDLR-202ENST00000382099 TRIAP1O43715 76 aa11.55□□□□□ -0.56
VLDLR-202ENST00000382099 TRACP01848 142 aa11.55□□□□□ -0.56
VLDLR-202ENST00000382099 CLEC2BQ92478 149 aa11.55□□□□□ -0.56
VLDLR-202ENST00000382099 TSPEAR-AS2P59090 65 aa11.55□□□□□ -0.56
VLDLR-202ENST00000382099 KLRB1Q12918 225 aa11.55□□□□□ -0.56
VLDLR-202ENST00000382099 H3BRN7 92 aa11.54□□□□□ -0.56
VLDLR-202ENST00000382099 H7C423 109 aa11.54□□□□□ -0.56
VLDLR-202ENST00000382099 IGKV1-17P01599 117 aa11.54□□□□□ -0.56
VLDLR-202ENST00000382099 MGPP08493 103 aa11.54□□□□□ -0.56
VLDLR-202ENST00000382099 CNTFRP26992 372 aa11.54□□□□□ -0.56
VLDLR-202ENST00000382099 DUX5Q96PT3 197 aa11.54□□□□□ -0.56
VLDLR-202ENST00000382099 CFHR4Q92496 578 aa11.54□□□□□ -0.56
VLDLR-202ENST00000382099 DSCAMO60469 2012 aa11.54□□□□□ -0.56
VLDLR-202ENST00000382099 DLX6P56179 175 aa11.54□□□□□ -0.56
VLDLR-202ENST00000382099 TTTY12Q9BZ98 90 aa11.54□□□□□ -0.56
VLDLR-202ENST00000382099 TRAV12-3A0A0B4J271 114 aa11.53□□□□□ -0.56
VLDLR-202ENST00000382099 COX6CP09669 75 aa11.53□□□□□ -0.56
VLDLR-202ENST00000382099 ZNF883P0CG24 379 aa11.53□□□□□ -0.56
VLDLR-202ENST00000382099 P0DMU3 169 aa11.53□□□□□ -0.56
VLDLR-202ENST00000382099 FAM231AP0DMU4 169 aa11.53□□□□□ -0.56
VLDLR-202ENST00000382099 FAM231CP0DMU5 169 aa11.53□□□□□ -0.56
VLDLR-202ENST00000382099 NPC2P61916 151 aa11.53□□□□□ -0.56
VLDLR-202ENST00000382099 PRB3Q04118 309 aaPredicted RBP11.53□□□□□ -0.56
VLDLR-202ENST00000382099 ZNF833PQ6ZTB9 187 aa11.53□□□□□ -0.56
VLDLR-202ENST00000382099 POM121L12Q8N7R1 296 aa11.53□□□□□ -0.56
VLDLR-202ENST00000382099 TMEM263Q8WUH6 116 aaKnown RBP11.53□□□□□ -0.56
VLDLR-202ENST00000382099 METTL26Q96S19 204 aa11.53□□□□□ -0.56
VLDLR-202ENST00000382099 MUC6Q6W4X9 2439 aa11.53□□□□□ -0.56
VLDLR-202ENST00000382099 NSUN5P1Q3KNT7 163 aa11.53□□□□□ -0.56
VLDLR-202ENST00000382099 TOMM6Q96B49 74 aa11.53□□□□□ -0.56
VLDLR-202ENST00000382099 C1orf43Q9BWL3 253 aa11.53□□□□□ -0.56
VLDLR-202ENST00000382099 CHD8Q9HCK8 2581 aa11.53□□□□□ -0.56
VLDLR-202ENST00000382099 RPL39LQ96EH5 51 aaKnown RBP11.52□□□□□ -0.56
VLDLR-202ENST00000382099 J3QQQ9 107 aa11.52□□□□□ -0.57
VLDLR-202ENST00000382099 M0R381 172 aa11.52□□□□□ -0.57
VLDLR-202ENST00000382099 COX7CP15954 63 aa11.52□□□□□ -0.57
VLDLR-202ENST00000382099 EBI3Q14213 229 aa11.52□□□□□ -0.57
VLDLR-202ENST00000382099 NCOR2Q9Y618 2525 aa11.52□□□□□ -0.57
VLDLR-202ENST00000382099 TRAV17A0A0B4J275 112 aa11.52□□□□□ -0.57
VLDLR-202ENST00000382099 RNF152Q8N8N0 203 aa11.52□□□□□ -0.57
VLDLR-202ENST00000382099 IGHV3-35A0A0C4DH35 117 aa11.51□□□□□ -0.57
VLDLR-202ENST00000382099 SUMO2P61956 95 aaKnown RBP11.51□□□□□ -0.57
VLDLR-202ENST00000382099 ARHGAP32A7KAX9 2087 aa11.51□□□□□ -0.57
VLDLR-202ENST00000382099 EIF4EBP3O60516 100 aaPredicted RBP11.51□□□□□ -0.57
VLDLR-202ENST00000382099 IGLV2-23P01705 113 aa11.51□□□□□ -0.57
VLDLR-202ENST00000382099 ZNF491Q8N8L2 437 aa11.51□□□□□ -0.57
VLDLR-202ENST00000382099 TEX36Q5VZQ5 186 aa11.5□□□□□ -0.57
VLDLR-202ENST00000382099 ZNF672Q499Z4 452 aaPredicted RBP11.5□□□□□ -0.57
VLDLR-202ENST00000382099 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.49□□□□□ -0.57
VLDLR-202ENST00000382099 MBD3L4A6NDZ8 208 aaPredicted RBP11.49□□□□□ -0.57
VLDLR-202ENST00000382099 MBD3L3A6NE82 208 aaPredicted RBP11.49□□□□□ -0.57
VLDLR-202ENST00000382099 MBD3L5A6NJ08 208 aaPredicted RBP11.49□□□□□ -0.57
VLDLR-202ENST00000382099 ADARB2-AS1A8MUL3 147 aa11.49□□□□□ -0.57
VLDLR-202ENST00000382099 UBE2E1P51965 193 aa11.49□□□□□ -0.57
VLDLR-202ENST00000382099 LINC00477Q96M19 166 aa11.49□□□□□ -0.57
VLDLR-202ENST00000382099 COL27A1Q8IZC6 1860 aaPredicted RBP11.49□□□□□ -0.57
VLDLR-202ENST00000382099 OVOL1O14753 267 aa11.48□□□□□ -0.57
VLDLR-202ENST00000382099 IGHV3-23P01764 117 aa11.48□□□□□ -0.57
VLDLR-202ENST00000382099 CNFNQ9BYD5 112 aa11.48□□□□□ -0.57
VLDLR-202ENST00000382099 PKIGQ9Y2B9 76 aa11.48□□□□□ -0.57
VLDLR-202ENST00000382099 SPTBN4Q9H254 2564 aa11.48□□□□□ -0.57
VLDLR-202ENST00000382099 IGKV3D-20A0A0C4DH25 116 aa11.48□□□□□ -0.57
VLDLR-202ENST00000382099 FAM240AA0A1B0GVK7 77 aa11.48□□□□□ -0.57
VLDLR-202ENST00000382099 H3BT86 120 aa11.48□□□□□ -0.57
VLDLR-202ENST00000382099 DYNAPQ8N1N2 210 aa11.48□□□□□ -0.57
VLDLR-202ENST00000382099 TRAV13-1A0A0B4J241 112 aa11.47□□□□□ -0.57
VLDLR-202ENST00000382099 RPS28P62857 69 aaKnown RBP11.47□□□□□ -0.57
VLDLR-202ENST00000382099 TNFAIP6P98066 277 aaPredicted RBP11.47□□□□□ -0.57
VLDLR-202ENST00000382099 Q6ZSV7 163 aa11.47□□□□□ -0.57
VLDLR-202ENST00000382099 DPH3Q96FX2 82 aa11.47□□□□□ -0.57
VLDLR-202ENST00000382099 RNF7Q9UBF6 113 aa11.47□□□□□ -0.57
VLDLR-202ENST00000382099 TP53TG1Q9Y2A0 90 aa11.47□□□□□ -0.57
VLDLR-202ENST00000382099 ICOSQ9Y6W8 199 aa11.47□□□□□ -0.57
VLDLR-202ENST00000382099 A0A0B4J2C4 111 aa11.47□□□□□ -0.57
VLDLR-202ENST00000382099 GAFA1Q96PS6 74 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms