RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 ZNF493Q6ZR52 646 aa10.57□□□□□ -0.72
GPC6-201ENST00000377047 J3QQQ9 107 aa10.57□□□□□ -0.72
GPC6-201ENST00000377047 SIRPDQ9H106 197 aa10.57□□□□□ -0.72
GPC6-201ENST00000377047 SMAD5-AS1Q9Y6J3 95 aa10.57□□□□□ -0.72
GPC6-201ENST00000377047 CD5LO43866 347 aa10.57□□□□□ -0.72
GPC6-201ENST00000377047 LGALS9BQ3B8N2 356 aa10.57□□□□□ -0.72
GPC6-201ENST00000377047 LGALS9CQ6DKI2 356 aa10.57□□□□□ -0.72
GPC6-201ENST00000377047 TRAV13-2A0A0B4J235 113 aa10.56□□□□□ -0.72
GPC6-201ENST00000377047 POLR3KQ9Y2Y1 108 aaPredicted RBP10.56□□□□□ -0.72
GPC6-201ENST00000377047 DOCK11Q5JSL3 2073 aa10.56□□□□□ -0.72
GPC6-201ENST00000377047 DEFB105AQ8NG35 78 aa10.56□□□□□ -0.72
GPC6-201ENST00000377047 IGKV1-17P01599 117 aa10.55□□□□□ -0.72
GPC6-201ENST00000377047 CAMK2N2Q96S95 79 aa10.55□□□□□ -0.72
GPC6-201ENST00000377047 TECTAO75443 2155 aa10.55□□□□□ -0.72
GPC6-201ENST00000377047 FGF6P10767 208 aa10.55□□□□□ -0.72
GPC6-201ENST00000377047 RPL39LQ96EH5 51 aaKnown RBP10.55□□□□□ -0.72
GPC6-201ENST00000377047 PKIGQ9Y2B9 76 aa10.55□□□□□ -0.72
GPC6-201ENST00000377047 DSCR8Q96T75 97 aa10.55□□□□□ -0.72
GPC6-201ENST00000377047 GATA1P15976 413 aaPredicted RBP10.54□□□□□ -0.72
GPC6-201ENST00000377047 SH2D6Q7Z4S9 175 aa10.54□□□□□ -0.72
GPC6-201ENST00000377047 CRYGCP07315 174 aa10.54□□□□□ -0.72
GPC6-201ENST00000377047 SLC25A29Q8N8R3 303 aa10.54□□□□□ -0.72
GPC6-201ENST00000377047 KLK5Q9Y337 293 aaPredicted RBP10.54□□□□□ -0.72
GPC6-201ENST00000377047 EML6Q6ZMW3 1958 aa10.54□□□□□ -0.72
GPC6-201ENST00000377047 IGHG2P01859 326 aa10.54□□□□□ -0.72
GPC6-201ENST00000377047 LOXL1Q08397 574 aaPredicted RBP10.54□□□□□ -0.72
GPC6-201ENST00000377047 BOD1L2Q8IYS8 172 aa10.54□□□□□ -0.72
GPC6-201ENST00000377047 DKK2Q9UBU2 259 aa10.54□□□□□ -0.72
GPC6-201ENST00000377047 TEX22C9J3V5 150 aa10.53□□□□□ -0.72
GPC6-201ENST00000377047 AMTNQ6UX39 209 aa10.53□□□□□ -0.72
GPC6-201ENST00000377047 Q9H8V8 135 aa10.53□□□□□ -0.72
GPC6-201ENST00000377047 TIRAPP58753 221 aa10.53□□□□□ -0.72
GPC6-201ENST00000377047 MSMPQ1L6U9 139 aa10.53□□□□□ -0.72
GPC6-201ENST00000377047 HHLA3Q9XRX5 114 aa10.53□□□□□ -0.72
GPC6-201ENST00000377047 IGLV1-47P01700 117 aa10.53□□□□□ -0.72
GPC6-201ENST00000377047 MED13Q9UHV7 2174 aa10.53□□□□□ -0.72
GPC6-201ENST00000377047 INAFM2P0DMQ5 153 aa10.53□□□□□ -0.72
GPC6-201ENST00000377047 Q6ZWC4 215 aa10.53□□□□□ -0.72
GPC6-201ENST00000377047 ZNF503Q96F45 646 aa10.53□□□□□ -0.72
GPC6-201ENST00000377047 IGHV4-4A0A075B6R2 117 aa10.52□□□□□ -0.72
GPC6-201ENST00000377047 A6NDX4 124 aa10.52□□□□□ -0.72
GPC6-201ENST00000377047 DAZ2Q13117 558 aaKnown RBP10.52□□□□□ -0.72
GPC6-201ENST00000377047 Q6ZSR3 168 aa10.52□□□□□ -0.72
GPC6-201ENST00000377047 DAZ4Q86SG3 579 aaKnown RBP10.52□□□□□ -0.72
GPC6-201ENST00000377047 GPHB5Q86YW7 130 aa10.52□□□□□ -0.72
GPC6-201ENST00000377047 DAZ3Q9NR90 486 aaKnown RBP10.52□□□□□ -0.72
GPC6-201ENST00000377047 K7EMT4 169 aa10.52□□□□□ -0.72
GPC6-201ENST00000377047 LTBP2Q14767 1821 aa10.52□□□□□ -0.72
GPC6-201ENST00000377047 Q8N1Y9 231 aa10.52□□□□□ -0.73
GPC6-201ENST00000377047 NOTCH3Q9UM47 2321 aa10.52□□□□□ -0.73
GPC6-201ENST00000377047 HAMPP81172 84 aa10.52□□□□□ -0.73
GPC6-201ENST00000377047 SPANXA1Q9NS26 97 aa10.52□□□□□ -0.73
GPC6-201ENST00000377047 WI2-2373I1.2A0A1W2PRP0 233 aa10.52□□□□□ -0.73
GPC6-201ENST00000377047 TMEM89A2RUT3 159 aa10.52□□□□□ -0.73
GPC6-201ENST00000377047 PATE2Q6UY27 113 aa10.52□□□□□ -0.73
GPC6-201ENST00000377047 LRRC75A-AS1Q8N1F1 130 aa10.52□□□□□ -0.73
GPC6-201ENST00000377047 COX7A2LO14548 114 aa10.51□□□□□ -0.73
GPC6-201ENST00000377047 PRAC2D3DTV9 90 aa10.51□□□□□ -0.73
GPC6-201ENST00000377047 TRBV12-3P01733 135 aa10.51□□□□□ -0.73
GPC6-201ENST00000377047 COL4A3Q01955 1670 aa10.51□□□□□ -0.73
GPC6-201ENST00000377047 IGLL5B9A064 214 aa10.51□□□□□ -0.73
GPC6-201ENST00000377047 ODF3L1Q8IXM7 274 aa10.51□□□□□ -0.73
GPC6-201ENST00000377047 PRO1854Q9UHT4 67 aa10.51□□□□□ -0.73
GPC6-201ENST00000377047 INAFM1C9JVW0 142 aa10.51□□□□□ -0.73
GPC6-201ENST00000377047 COX8AP10176 69 aa10.51□□□□□ -0.73
GPC6-201ENST00000377047 TRBV20-1A0A075B6N2 111 aa10.5□□□□□ -0.73
GPC6-201ENST00000377047 TRAV4A0A0B4J268 109 aa10.5□□□□□ -0.73
GPC6-201ENST00000377047 HIST2H2BCQ6DN03 193 aa10.5□□□□□ -0.73
GPC6-201ENST00000377047 CEND1Q8N111 149 aa10.5□□□□□ -0.73
GPC6-201ENST00000377047 WFDC11Q8NEX6 87 aa10.5□□□□□ -0.73
GPC6-201ENST00000377047 UBL5Q9BZL1 73 aa10.5□□□□□ -0.73
GPC6-201ENST00000377047 ETDCA0A1B0GVM5 59 aa10.5□□□□□ -0.73
GPC6-201ENST00000377047 IGHV4-31P0DP07 118 aa10.5□□□□□ -0.73
GPC6-201ENST00000377047 DEFB1P60022 68 aa10.5□□□□□ -0.73
GPC6-201ENST00000377047 ZNF843Q8N446 348 aa10.5□□□□□ -0.73
GPC6-201ENST00000377047 IL15RAQ13261 267 aa10.5□□□□□ -0.73
GPC6-201ENST00000377047 UBE2V1Q13404 147 aa10.5□□□□□ -0.73
GPC6-201ENST00000377047 DLEU1O43261 78 aa10.5□□□□□ -0.73
GPC6-201ENST00000377047 DEFB125Q8N687 156 aa10.49□□□□□ -0.73
GPC6-201ENST00000377047 PRO3102Q9H379 93 aa10.49□□□□□ -0.73
GPC6-201ENST00000377047 TMEM131Q92545 1883 aa10.49□□□□□ -0.73
GPC6-201ENST00000377047 hADV29S1A0JD25 119 aa10.49□□□□□ -0.73
GPC6-201ENST00000377047 K7EMI3 77 aa10.49□□□□□ -0.73
GPC6-201ENST00000377047 NDUFS5O43920 106 aa10.49□□□□□ -0.73
GPC6-201ENST00000377047 IGLL1P15814 213 aa10.49□□□□□ -0.73
GPC6-201ENST00000377047 INSL3P51460 131 aa10.49□□□□□ -0.73
GPC6-201ENST00000377047 COX11Q9Y6N1 276 aa10.48□□□□□ -0.73
GPC6-201ENST00000377047 FAM208BQ5VWN6 2430 aa10.48□□□□□ -0.73
GPC6-201ENST00000377047 TINCRA0A1B0GVN0 87 aa10.48□□□□□ -0.73
GPC6-201ENST00000377047 E7EUB6 86 aa10.48□□□□□ -0.73
GPC6-201ENST00000377047 TNFRSF13BO14836 293 aaPredicted RBP10.48□□□□□ -0.73
GPC6-201ENST00000377047 UNQ9165/PRO28630Q6UXU0 137 aa10.48□□□□□ -0.73
GPC6-201ENST00000377047 TRAV12-1A0A0B4J245 112 aa10.48□□□□□ -0.73
GPC6-201ENST00000377047 MSRB1Q9NZV6 116 aa10.48□□□□□ -0.73
GPC6-201ENST00000377047 IGHG4P01861 327 aa10.48□□□□□ -0.73
GPC6-201ENST00000377047 HERV-K104P63124 156 aa10.48□□□□□ -0.73
GPC6-201ENST00000377047 MRPL52Q86TS9 123 aaKnown RBP10.48□□□□□ -0.73
GPC6-201ENST00000377047 NDUFA11Q86Y39 141 aa10.48□□□□□ -0.73
GPC6-201ENST00000377047 LMO4P61968 165 aa10.47□□□□□ -0.73
GPC6-201ENST00000377047 TMEM61Q8N0U2 210 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms