RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 CDSNQ15517 529 aa12.84□□□□□ -0.35
SFXN1-201ENST00000321442 Q8N7P7 452 aa12.84□□□□□ -0.35
SFXN1-201ENST00000321442 CFHR4Q92496 578 aa12.84□□□□□ -0.35
SFXN1-201ENST00000321442 A0A1B0GXF2 115 aa12.83□□□□□ -0.35
SFXN1-201ENST00000321442 TMEM190Q8WZ59 177 aa12.83□□□□□ -0.35
SFXN1-201ENST00000321442 TRAV8-4A0A0B4J246 113 aa12.83□□□□□ -0.36
SFXN1-201ENST00000321442 OOSP1A8MZH6 123 aa12.83□□□□□ -0.36
SFXN1-201ENST00000321442 ANXA2RQ3ZCQ2 193 aa12.83□□□□□ -0.36
SFXN1-201ENST00000321442 MOB4Q9Y3A3 225 aa12.83□□□□□ -0.36
SFXN1-201ENST00000321442 TRBV7-1A0A0A6YYK4 115 aa12.83□□□□□ -0.36
SFXN1-201ENST00000321442 C19orf71A6NCJ1 209 aa12.83□□□□□ -0.36
SFXN1-201ENST00000321442 KNCNA6PVL3 124 aa12.83□□□□□ -0.36
SFXN1-201ENST00000321442 F6UB75 175 aa12.83□□□□□ -0.36
SFXN1-201ENST00000321442 SIVA1O15304 175 aa12.83□□□□□ -0.36
SFXN1-201ENST00000321442 USP34Q70CQ2 3546 aa12.83□□□□□ -0.36
SFXN1-201ENST00000321442 ZNF625Q96I27 306 aaPredicted RBP12.83□□□□□ -0.36
SFXN1-201ENST00000321442 M0R2P5 195 aa12.82□□□□□ -0.36
SFXN1-201ENST00000321442 MBD6Q96DN6 1003 aa12.82□□□□□ -0.36
SFXN1-201ENST00000321442 KAAG1Q9UBP8 84 aa12.82□□□□□ -0.36
SFXN1-201ENST00000321442 C2orf82Q6UX34 121 aa12.82□□□□□ -0.36
SFXN1-201ENST00000321442 DMXL2Q8TDJ6 3036 aa12.81□□□□□ -0.36
SFXN1-201ENST00000321442 IGLV2-23P01705 113 aa12.81□□□□□ -0.36
SFXN1-201ENST00000321442 CR1LQ2VPA4 569 aa12.81□□□□□ -0.36
SFXN1-201ENST00000321442 SDHAF1A6NFY7 115 aa12.81□□□□□ -0.36
SFXN1-201ENST00000321442 C19orf84I3L1E1 186 aa12.81□□□□□ -0.36
SFXN1-201ENST00000321442 RBX1P62877 108 aa12.81□□□□□ -0.36
SFXN1-201ENST00000321442 PRAC2D3DTV9 90 aa12.8□□□□□ -0.36
SFXN1-201ENST00000321442 HIST2H2BCQ6DN03 193 aa12.8□□□□□ -0.36
SFXN1-201ENST00000321442 BOD1L2Q8IYS8 172 aa12.8□□□□□ -0.36
SFXN1-201ENST00000321442 TRBV7-9A0A0J9YWB2 115 aa12.8□□□□□ -0.36
SFXN1-201ENST00000321442 PRSS29PA6NIE9 313 aa12.8□□□□□ -0.36
SFXN1-201ENST00000321442 KLHL30-AS1Q8NEE0 82 aa12.8□□□□□ -0.36
SFXN1-201ENST00000321442 PRSS22Q9GZN4 317 aa12.8□□□□□ -0.36
SFXN1-201ENST00000321442 A0A087WX48 190 aa12.8□□□□□ -0.36
SFXN1-201ENST00000321442 FAM110DQ8TAY7 271 aaPredicted RBP12.79□□□□□ -0.36
SFXN1-201ENST00000321442 MLST8Q9BVC4 326 aa12.79□□□□□ -0.36
SFXN1-201ENST00000321442 TRAV8-3A0A0A6YYJ7 113 aa12.79□□□□□ -0.36
SFXN1-201ENST00000321442 IGLL5B9A064 214 aa12.79□□□□□ -0.36
SFXN1-201ENST00000321442 PHLDA1Q8WV24 401 aaPredicted RBP12.79□□□□□ -0.36
SFXN1-201ENST00000321442 TRAV12-2A0A075B6T6 113 aa12.78□□□□□ -0.36
SFXN1-201ENST00000321442 B4DSR2 109 aa12.78□□□□□ -0.36
SFXN1-201ENST00000321442 ADARB2-AS1A8MUL3 147 aa12.78□□□□□ -0.36
SFXN1-201ENST00000321442 GNRH2O43555 120 aa12.78□□□□□ -0.36
SFXN1-201ENST00000321442 TEX22C9J3V5 150 aa12.78□□□□□ -0.36
SFXN1-201ENST00000321442 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.77□□□□□ -0.36
SFXN1-201ENST00000321442 SPINK13Q1W4C9 94 aa12.77□□□□□ -0.36
SFXN1-201ENST00000321442 C1orf159Q96HA4 380 aa12.77□□□□□ -0.36
SFXN1-201ENST00000321442 ATP6V0BQ99437 205 aa12.77□□□□□ -0.36
SFXN1-201ENST00000321442 PMVKQ15126 192 aa12.77□□□□□ -0.36
SFXN1-201ENST00000321442 RPL39LQ96EH5 51 aaKnown RBP12.77□□□□□ -0.36
SFXN1-201ENST00000321442 KLK9Q9UKQ9 250 aa12.77□□□□□ -0.36
SFXN1-201ENST00000321442 IGHV4-61A0A0C4DH41 118 aa12.77□□□□□ -0.37
SFXN1-201ENST00000321442 CTSGP08311 255 aa12.77□□□□□ -0.37
SFXN1-201ENST00000321442 DEFB1P60022 68 aa12.77□□□□□ -0.37
SFXN1-201ENST00000321442 PLEKHB2Q96CS7 222 aa12.77□□□□□ -0.37
SFXN1-201ENST00000321442 CFAP47Q6ZTR5 3102 aa12.76□□□□□ -0.37
SFXN1-201ENST00000321442 FGF6P10767 208 aa12.76□□□□□ -0.37
SFXN1-201ENST00000321442 PPDPFLQ8WWR9 84 aa12.76□□□□□ -0.37
SFXN1-201ENST00000321442 CFAP46Q8IYW2 2715 aa12.76□□□□□ -0.37
SFXN1-201ENST00000321442 VWC2LB2RUY7 222 aa12.76□□□□□ -0.37
SFXN1-201ENST00000321442 ZZEF1O43149 2961 aa12.76□□□□□ -0.37
SFXN1-201ENST00000321442 TIMM21Q9BVV7 248 aa12.76□□□□□ -0.37
SFXN1-201ENST00000321442 CRYGCP07315 174 aa12.75□□□□□ -0.37
SFXN1-201ENST00000321442 FOXI2Q6ZQN5 318 aa12.75□□□□□ -0.37
SFXN1-201ENST00000321442 COPS9Q8WXC6 57 aa12.75□□□□□ -0.37
SFXN1-201ENST00000321442 Q96MF0 132 aa12.75□□□□□ -0.37
SFXN1-201ENST00000321442 IGLV1-47P01700 117 aa12.75□□□□□ -0.37
SFXN1-201ENST00000321442 TRGV2A0A075B6R0 118 aa12.74□□□□□ -0.37
SFXN1-201ENST00000321442 IGHV4-30-2A0A087WSY4 118 aa12.74□□□□□ -0.37
SFXN1-201ENST00000321442 DUSP14O95147 198 aaKnown RBP12.74□□□□□ -0.37
SFXN1-201ENST00000321442 MSMBP08118 114 aa12.74□□□□□ -0.37
SFXN1-201ENST00000321442 DAZ1Q9NQZ3 744 aaKnown RBP12.74□□□□□ -0.37
SFXN1-201ENST00000321442 PRO1854Q9UHT4 67 aa12.74□□□□□ -0.37
SFXN1-201ENST00000321442 RNASE13Q5GAN3 156 aaKnown RBP12.74□□□□□ -0.37
SFXN1-201ENST00000321442 DMXL1Q9Y485 3027 aa12.74□□□□□ -0.37
SFXN1-201ENST00000321442 IGHV3-53P01767 116 aa12.74□□□□□ -0.37
SFXN1-201ENST00000321442 ATXN8Q156A1 80 aa12.74□□□□□ -0.37
SFXN1-201ENST00000321442 ODF1Q14990 250 aa12.73□□□□□ -0.37
SFXN1-201ENST00000321442 C8orf31Q8N9H6 132 aa12.73□□□□□ -0.37
SFXN1-201ENST00000321442 OR11H6Q8NGC7 330 aa12.73□□□□□ -0.37
SFXN1-201ENST00000321442 TRAV13-1A0A0B4J241 112 aa12.73□□□□□ -0.37
SFXN1-201ENST00000321442 ZNF80P51504 273 aaPredicted RBP12.73□□□□□ -0.37
SFXN1-201ENST00000321442 UBE2E1P51965 193 aa12.73□□□□□ -0.37
SFXN1-201ENST00000321442 SYNJ2BPP57105 145 aa12.73□□□□□ -0.37
SFXN1-201ENST00000321442 TMEM101Q96IK0 257 aa12.73□□□□□ -0.37
SFXN1-201ENST00000321442 IGLV11-55A0A075B6I3 123 aa12.72□□□□□ -0.37
SFXN1-201ENST00000321442 TRBV20-1A0A075B6N2 111 aa12.72□□□□□ -0.37
SFXN1-201ENST00000321442 J3QQQ9 107 aa12.72□□□□□ -0.37
SFXN1-201ENST00000321442 TAL2Q16559 108 aa12.72□□□□□ -0.37
SFXN1-201ENST00000321442 Q8N976 141 aa12.72□□□□□ -0.37
SFXN1-201ENST00000321442 LOC400499M0QZD8 3231 aa12.72□□□□□ -0.37
SFXN1-201ENST00000321442 TRGV11A0A075B6L2 103 aa12.72□□□□□ -0.37
SFXN1-201ENST00000321442 INS-IGF2F8WCM5 200 aa12.72□□□□□ -0.37
SFXN1-201ENST00000321442 ZFP36P26651 326 aaKnown RBP12.71□□□□□ -0.37
SFXN1-201ENST00000321442 G3V4G9 280 aa12.71□□□□□ -0.37
SFXN1-201ENST00000321442 IGHV7-81A0A0B4J1V7 117 aa12.71□□□□□ -0.38
SFXN1-201ENST00000321442 SLC25A20O43772 301 aa12.71□□□□□ -0.38
SFXN1-201ENST00000321442 LY6G5BQ8NDX9 201 aa12.71□□□□□ -0.38
SFXN1-201ENST00000321442 BUB3O43684 328 aa12.7□□□□□ -0.38
SFXN1-201ENST00000321442 IGHV3-16A0A0C4DH30 117 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms