RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 C16orf54Q6UWD8 224 aa9.8□□□□□ -0.84
DNMT3A-202ENST00000321117 RAI1Q7Z5J4 1906 aaPredicted RBP9.8□□□□□ -0.84
DNMT3A-202ENST00000321117 CSPG4Q6UVK1 2322 aa9.8□□□□□ -0.84
DNMT3A-202ENST00000321117 CENPVL3A0A0U1RRI6 287 aa9.8□□□□□ -0.84
DNMT3A-202ENST00000321117 J3QQQ9 107 aa9.8□□□□□ -0.84
DNMT3A-202ENST00000321117 SMAD5-AS1Q9Y6J3 95 aa9.8□□□□□ -0.84
DNMT3A-202ENST00000321117 IGHV3OR16-12A0A075B7B8 117 aa9.8□□□□□ -0.84
DNMT3A-202ENST00000321117 Q8NA96 180 aa9.8□□□□□ -0.84
DNMT3A-202ENST00000321117 TRAV8-4A0A0B4J246 113 aa9.79□□□□□ -0.84
DNMT3A-202ENST00000321117 GAS8-AS1O95177 125 aa9.79□□□□□ -0.84
DNMT3A-202ENST00000321117 MRPS12O15235 138 aaKnown RBP9.79□□□□□ -0.84
DNMT3A-202ENST00000321117 ATXN8Q156A1 80 aa9.79□□□□□ -0.84
DNMT3A-202ENST00000321117 MAPKAPK5-AS1Q8N8E1 139 aa9.79□□□□□ -0.84
DNMT3A-202ENST00000321117 SPXQ9BT56 116 aa9.79□□□□□ -0.84
DNMT3A-202ENST00000321117 MSRB2Q9Y3D2 182 aa9.79□□□□□ -0.84
DNMT3A-202ENST00000321117 TOMM6Q96B49 74 aa9.79□□□□□ -0.84
DNMT3A-202ENST00000321117 C1QTNF4Q9BXJ3 329 aa9.79□□□□□ -0.84
DNMT3A-202ENST00000321117 IGHV3-73A0A0B4J1V6 119 aa9.79□□□□□ -0.84
DNMT3A-202ENST00000321117 IGHV1-69DA0A0B4J2H0 117 aa9.79□□□□□ -0.84
DNMT3A-202ENST00000321117 ODF3BA8MYP8 253 aa9.79□□□□□ -0.84
DNMT3A-202ENST00000321117 TRPT1Q86TN4 253 aaKnown RBP9.79□□□□□ -0.84
DNMT3A-202ENST00000321117 BAALCQ8WXS3 180 aa9.79□□□□□ -0.84
DNMT3A-202ENST00000321117 MRGPRG-AS1Q2M3A8 158 aa9.78□□□□□ -0.84
DNMT3A-202ENST00000321117 COPS9Q8WXC6 57 aa9.78□□□□□ -0.84
DNMT3A-202ENST00000321117 MUC6Q6W4X9 2439 aa9.78□□□□□ -0.84
DNMT3A-202ENST00000321117 M0R2P5 195 aa9.78□□□□□ -0.84
DNMT3A-202ENST00000321117 LGALS1P09382 135 aaKnown RBP9.78□□□□□ -0.84
DNMT3A-202ENST00000321117 SPAG8Q99932 426 aaPredicted RBP9.78□□□□□ -0.84
DNMT3A-202ENST00000321117 TIMM21Q9BVV7 248 aa9.78□□□□□ -0.84
DNMT3A-202ENST00000321117 NPC2P61916 151 aa9.78□□□□□ -0.84
DNMT3A-202ENST00000321117 PTPRBP23467 1997 aa9.78□□□□□ -0.84
DNMT3A-202ENST00000321117 IGHV1-69P01742 117 aa9.77□□□□□ -0.84
DNMT3A-202ENST00000321117 C19orf54Q5BKX5 351 aa9.77□□□□□ -0.84
DNMT3A-202ENST00000321117 YAE1D1Q9NRH1 226 aa9.77□□□□□ -0.84
DNMT3A-202ENST00000321117 ZFP36P26651 326 aaKnown RBP9.77□□□□□ -0.85
DNMT3A-202ENST00000321117 DEFB1P60022 68 aa9.77□□□□□ -0.85
DNMT3A-202ENST00000321117 C2orf82Q6UX34 121 aa9.77□□□□□ -0.85
DNMT3A-202ENST00000321117 SPANXB1Q9NS25 103 aaPredicted RBP9.77□□□□□ -0.85
DNMT3A-202ENST00000321117 SLC25A20O43772 301 aa9.76□□□□□ -0.85
DNMT3A-202ENST00000321117 PIFOQ8TCI5 191 aa9.76□□□□□ -0.85
DNMT3A-202ENST00000321117 CCDC140Q96MF4 163 aa9.76□□□□□ -0.85
DNMT3A-202ENST00000321117 IGHV7-4-1A0A0J9YVY3 117 aa9.76□□□□□ -0.85
DNMT3A-202ENST00000321117 SPINK13Q1W4C9 94 aa9.76□□□□□ -0.85
DNMT3A-202ENST00000321117 CFAP54Q96N23 3096 aa9.76□□□□□ -0.85
DNMT3A-202ENST00000321117 FOXI1Q12951 378 aa9.76□□□□□ -0.85
DNMT3A-202ENST00000321117 LINC01587Q99440 93 aa9.76□□□□□ -0.85
DNMT3A-202ENST00000321117 HHLA3Q9XRX5 114 aa9.76□□□□□ -0.85
DNMT3A-202ENST00000321117 XIRP2A4UGR9 3374 aa9.76□□□□□ -0.85
DNMT3A-202ENST00000321117 CUL9Q8IWT3 2517 aa9.75□□□□□ -0.85
DNMT3A-202ENST00000321117 NOTCH2Q04721 2471 aa9.75□□□□□ -0.85
DNMT3A-202ENST00000321117 TRAV12-2A0A075B6T6 113 aa9.75□□□□□ -0.85
DNMT3A-202ENST00000321117 A0A0U1RRA0 63 aa9.75□□□□□ -0.85
DNMT3A-202ENST00000321117 C11orf86A6NJI1 115 aa9.75□□□□□ -0.85
DNMT3A-202ENST00000321117 ZFP2Q6ZN57 461 aa9.75□□□□□ -0.85
DNMT3A-202ENST00000321117 CNFNQ9BYD5 112 aa9.75□□□□□ -0.85
DNMT3A-202ENST00000321117 ZFAND3Q9H8U3 227 aa9.75□□□□□ -0.85
DNMT3A-202ENST00000321117 KLK9Q9UKQ9 250 aa9.75□□□□□ -0.85
DNMT3A-202ENST00000321117 TCF15Q12870 199 aa9.75□□□□□ -0.85
DNMT3A-202ENST00000321117 SORL1Q92673 2214 aa9.74□□□□□ -0.85
DNMT3A-202ENST00000321117 I3L3M4 83 aa9.74□□□□□ -0.85
DNMT3A-202ENST00000321117 RPL39P62891 51 aaKnown RBP9.74□□□□□ -0.85
DNMT3A-202ENST00000321117 TEN1Q86WV5 123 aa9.74□□□□□ -0.85
DNMT3A-202ENST00000321117 C11orf21Q9P2W6 132 aa9.74□□□□□ -0.85
DNMT3A-202ENST00000321117 TSPAN13O95857 204 aa9.74□□□□□ -0.85
DNMT3A-202ENST00000321117 LY6DQ14210 128 aa9.74□□□□□ -0.85
DNMT3A-202ENST00000321117 SUMO4Q6EEV6 95 aa9.74□□□□□ -0.85
DNMT3A-202ENST00000321117 C5orf56Q8N8D9 126 aa9.74□□□□□ -0.85
DNMT3A-202ENST00000321117 RASL10AQ92737 203 aa9.74□□□□□ -0.85
DNMT3A-202ENST00000321117 SIRPDQ9H106 197 aa9.74□□□□□ -0.85
DNMT3A-202ENST00000321117 LAMA1P25391 3075 aa9.74□□□□□ -0.85
DNMT3A-202ENST00000321117 IGHV1OR15-1A0A075B7D0 117 aa9.73□□□□□ -0.85
DNMT3A-202ENST00000321117 UBE2L6O14933 153 aa9.73□□□□□ -0.85
DNMT3A-202ENST00000321117 C10orf126Q8N4M7 172 aa9.73□□□□□ -0.85
DNMT3A-202ENST00000321117 ITLN2Q8WWU7 325 aaPredicted RBP9.73□□□□□ -0.85
DNMT3A-202ENST00000321117 LINC01548A6NM66 108 aa9.73□□□□□ -0.85
DNMT3A-202ENST00000321117 NRACQ8N912 160 aa9.73□□□□□ -0.85
DNMT3A-202ENST00000321117 CEP295Q9C0D2 2601 aa9.73□□□□□ -0.85
DNMT3A-202ENST00000321117 CFC1BP0CG36 223 aa9.73□□□□□ -0.85
DNMT3A-202ENST00000321117 CFC1P0CG37 223 aa9.73□□□□□ -0.85
DNMT3A-202ENST00000321117 EBI3Q14213 229 aa9.72□□□□□ -0.85
DNMT3A-202ENST00000321117 NEXN-AS1Q8NBZ9 246 aa9.72□□□□□ -0.85
DNMT3A-202ENST00000321117 PTH2Q96A98 100 aa9.72□□□□□ -0.85
DNMT3A-202ENST00000321117 DNAL4O96015 105 aa9.72□□□□□ -0.85
DNMT3A-202ENST00000321117 FBXL19-AS1Q494R0 122 aa9.72□□□□□ -0.85
DNMT3A-202ENST00000321117 IGF2RP11717 2491 aa9.72□□□□□ -0.85
DNMT3A-202ENST00000321117 AGRNO00468 2067 aa9.72□□□□□ -0.85
DNMT3A-202ENST00000321117 A4D1N5 150 aa9.72□□□□□ -0.85
DNMT3A-202ENST00000321117 IGF1P05019 195 aa9.72□□□□□ -0.85
DNMT3A-202ENST00000321117 MED14OSP0DP75 135 aa9.72□□□□□ -0.85
DNMT3A-202ENST00000321117 UNQ9165/PRO28630Q6UXU0 137 aa9.72□□□□□ -0.85
DNMT3A-202ENST00000321117 SYNJ2BPP57105 145 aa9.71□□□□□ -0.85
DNMT3A-202ENST00000321117 KNCNA6PVL3 124 aa9.71□□□□□ -0.85
DNMT3A-202ENST00000321117 NTN5Q8WTR8 489 aaPredicted RBP9.71□□□□□ -0.85
DNMT3A-202ENST00000321117 IGKV3OR2-268A0A0C4DH90 116 aa9.71□□□□□ -0.86
DNMT3A-202ENST00000321117 ADARB2-AS1A8MUL3 147 aa9.71□□□□□ -0.86
DNMT3A-202ENST00000321117 RHOHQ15669 191 aa9.71□□□□□ -0.86
DNMT3A-202ENST00000321117 COX8CQ7Z4L0 72 aa9.71□□□□□ -0.86
DNMT3A-202ENST00000321117 NDUFA12Q9UI09 145 aa9.7□□□□□ -0.86
DNMT3A-202ENST00000321117 ACACBO00763 2458 aa9.7□□□□□ -0.86
DNMT3A-202ENST00000321117 H3BMM0 161 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms