RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 MGST1P10620 155 aaKnown RBP8.55□□□□□ -1.04
CD44-203ENST00000278386 S100A4P26447 101 aaKnown RBP8.55□□□□□ -1.04
CD44-203ENST00000278386 ATP6V0CP27449 155 aa8.55□□□□□ -1.04
CD44-203ENST00000278386 SUMO1P63165 101 aaKnown RBP8.55□□□□□ -1.04
CD44-203ENST00000278386 Q5BKY6 102 aa8.55□□□□□ -1.04
CD44-203ENST00000278386 Q8N814 137 aa8.55□□□□□ -1.04
CD44-203ENST00000278386 ATP6V0E2Q8NHE4 81 aa8.55□□□□□ -1.04
CD44-203ENST00000278386 PSMG3Q9BT73 122 aaPredicted RBP8.55□□□□□ -1.04
CD44-203ENST00000278386 GTSF1LQ9H1H1 148 aa8.55□□□□□ -1.04
CD44-203ENST00000278386 TMEM167BQ9NRX6 74 aa8.55□□□□□ -1.04
CD44-203ENST00000278386 FAM229AH3BQW9 127 aa8.54□□□□□ -1.04
CD44-203ENST00000278386 CXorf1O96002 111 aa8.54□□□□□ -1.04
CD44-203ENST00000278386 AQP10Q96PS8 301 aa8.54□□□□□ -1.04
CD44-203ENST00000278386 TMEM70Q9BUB7 260 aa8.54□□□□□ -1.04
CD44-203ENST00000278386 ACTR3CQ9C0K3 210 aaPredicted RBP8.54□□□□□ -1.04
CD44-203ENST00000278386 SH3BGRL3Q9H299 93 aa8.54□□□□□ -1.04
CD44-203ENST00000278386 EPDR1Q9UM22 224 aa8.54□□□□□ -1.04
CD44-203ENST00000278386 DMBT1Q9UGM3 2413 aaPredicted RBP8.53□□□□□ -1.04
CD44-203ENST00000278386 DNAH8Q96JB1 4490 aa8.53□□□□□ -1.04
CD44-203ENST00000278386 GAGE12JA6NER3 117 aa8.53□□□□□ -1.04
CD44-203ENST00000278386 IGLV2-11P01706 119 aa8.53□□□□□ -1.04
CD44-203ENST00000278386 RNASE3P12724 160 aaKnown RBP8.53□□□□□ -1.04
CD44-203ENST00000278386 GAGE1Q13065 139 aa8.53□□□□□ -1.04
CD44-203ENST00000278386 GAGE4Q13068 117 aa8.53□□□□□ -1.04
CD44-203ENST00000278386 GAGE5Q13069 117 aa8.53□□□□□ -1.04
CD44-203ENST00000278386 LAGE3Q14657 143 aa8.53□□□□□ -1.04
CD44-203ENST00000278386 LGALSLQ3ZCW2 172 aaPredicted RBP8.53□□□□□ -1.04
CD44-203ENST00000278386 GAGE13Q4V321 117 aa8.53□□□□□ -1.04
CD44-203ENST00000278386 Q6ZSN1 163 aa8.53□□□□□ -1.04
CD44-203ENST00000278386 SUN5Q8TC36 379 aa8.53□□□□□ -1.04
CD44-203ENST00000278386 MED28Q9H204 178 aa8.53□□□□□ -1.04
CD44-203ENST00000278386 PARLQ9H300 379 aa8.53□□□□□ -1.04
CD44-203ENST00000278386 MYCBP2O75592 4640 aa8.52□□□□□ -1.04
CD44-203ENST00000278386 TRAV34A0A0B4J273 112 aa8.52□□□□□ -1.05
CD44-203ENST00000278386 IFNA7P01567 189 aa8.52□□□□□ -1.05
CD44-203ENST00000278386 ASIPP42127 132 aa8.52□□□□□ -1.05
CD44-203ENST00000278386 SERF2P84101 59 aa8.52□□□□□ -1.05
CD44-203ENST00000278386 SAPCD1Q5SSQ6 148 aa8.52□□□□□ -1.05
CD44-203ENST00000278386 PTH2Q96A98 100 aa8.52□□□□□ -1.05
CD44-203ENST00000278386 TM2D2Q9BX73 214 aa8.52□□□□□ -1.05
CD44-203ENST00000278386 ARL2-SNX15V9GYD0 113 aa8.52□□□□□ -1.05
CD44-203ENST00000278386 A8MWV9 139 aa8.51□□□□□ -1.05
CD44-203ENST00000278386 UBE2G2P60604 165 aa8.51□□□□□ -1.05
CD44-203ENST00000278386 Q8N3U1 123 aa8.51□□□□□ -1.05
CD44-203ENST00000278386 TNFSF18Q9UNG2 199 aa8.51□□□□□ -1.05
CD44-203ENST00000278386 FLG2Q5D862 2391 aaPredicted RBP8.5□□□□□ -1.05
CD44-203ENST00000278386 IGKV3D-20A0A0C4DH25 116 aa8.5□□□□□ -1.05
CD44-203ENST00000278386 A0A1W2PRE2 83 aa8.5□□□□□ -1.05
CD44-203ENST00000278386 G3V3Q6 166 aa8.5□□□□□ -1.05
CD44-203ENST00000278386 H3BVH4 76 aa8.5□□□□□ -1.05
CD44-203ENST00000278386 RGS21Q2M5E4 152 aa8.5□□□□□ -1.05
CD44-203ENST00000278386 ZFP2Q6ZN57 461 aa8.5□□□□□ -1.05
CD44-203ENST00000278386 Q86TA4 180 aa8.5□□□□□ -1.05
CD44-203ENST00000278386 INO80EQ8NBZ0 244 aaPredicted RBP8.5□□□□□ -1.05
CD44-203ENST00000278386 OR2T35Q8NGX2 323 aa8.5□□□□□ -1.05
CD44-203ENST00000278386 LINC00479Q96M42 142 aa8.5□□□□□ -1.05
CD44-203ENST00000278386 FXYD6-FXYD2A0A087WZ82 144 aa8.49□□□□□ -1.05
CD44-203ENST00000278386 TRAV8-3A0A0A6YYJ7 113 aa8.49□□□□□ -1.05
CD44-203ENST00000278386 BORCS7-ASMTA0A0B4J1R7 106 aa8.49□□□□□ -1.05
CD44-203ENST00000278386 CTXND1A0A1B0GTU2 59 aa8.49□□□□□ -1.05
CD44-203ENST00000278386 B4DEV8 164 aa8.49□□□□□ -1.05
CD44-203ENST00000278386 PEX7O00628 323 aa8.49□□□□□ -1.05
CD44-203ENST00000278386 LECT2O14960 151 aa8.49□□□□□ -1.05
CD44-203ENST00000278386 GIPP09681 153 aaPredicted RBP8.49□□□□□ -1.05
CD44-203ENST00000278386 LINC00694P0DN24 101 aa8.49□□□□□ -1.05
CD44-203ENST00000278386 WFDC2Q14508 124 aa8.49□□□□□ -1.05
CD44-203ENST00000278386 TOR2AQ5JU69 321 aa8.49□□□□□ -1.05
CD44-203ENST00000278386 FAM74A4Q5TZK3 123 aa8.49□□□□□ -1.05
CD44-203ENST00000278386 RPL7L1Q6DKI1 246 aaKnown RBP8.49□□□□□ -1.05
CD44-203ENST00000278386 SYT8Q8NBV8 401 aa8.49□□□□□ -1.05
CD44-203ENST00000278386 JPT2Q9H910 190 aa8.49□□□□□ -1.05
CD44-203ENST00000278386 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.48□□□□□ -1.05
CD44-203ENST00000278386 FABP5P3A8MUU1 101 aa8.48□□□□□ -1.05
CD44-203ENST00000278386 M0R036 132 aa8.48□□□□□ -1.05
CD44-203ENST00000278386 FGF8P55075 233 aaPredicted RBP8.48□□□□□ -1.05
CD44-203ENST00000278386 DAZ4Q86SG3 579 aaKnown RBP8.48□□□□□ -1.05
CD44-203ENST00000278386 C14orf178Q8N769 122 aaPredicted RBP8.48□□□□□ -1.05
CD44-203ENST00000278386 DAZ3Q9NR90 486 aaKnown RBP8.48□□□□□ -1.05
CD44-203ENST00000278386 URGCP-MRPS24S4R325 110 aa8.48□□□□□ -1.05
CD44-203ENST00000278386 RNF222A6NCQ9 220 aa8.47□□□□□ -1.05
CD44-203ENST00000278386 RHODO00212 210 aa8.47□□□□□ -1.05
CD44-203ENST00000278386 ZNF726P1Q15940 193 aa8.47□□□□□ -1.05
CD44-203ENST00000278386 PIK3CD-AS1Q5SR53 167 aa8.47□□□□□ -1.05
CD44-203ENST00000278386 AKR1C8PQ5T2L2 129 aa8.47□□□□□ -1.05
CD44-203ENST00000278386 OR11H4Q8NGC9 324 aa8.47□□□□□ -1.05
CD44-203ENST00000278386 SAMD10Q9BYL1 202 aa8.47□□□□□ -1.05
CD44-203ENST00000278386 IL36BQ9NZH7 164 aa8.47□□□□□ -1.05
CD44-203ENST00000278386 FAM30AQ9NZY2 134 aa8.47□□□□□ -1.05
CD44-203ENST00000278386 A0A087WWC5 75 aa8.46□□□□□ -1.06
CD44-203ENST00000278386 GRIFINA4D1Z8 144 aa8.46□□□□□ -1.06
CD44-203ENST00000278386 FAM74A7A6NL05 159 aa8.46□□□□□ -1.06
CD44-203ENST00000278386 SH2D1AO60880 128 aa8.46□□□□□ -1.06
CD44-203ENST00000278386 UBE2G1P62253 170 aa8.46□□□□□ -1.06
CD44-203ENST00000278386 DMRTA1Q5VZB9 504 aa8.46□□□□□ -1.06
CD44-203ENST00000278386 HIST1H2BAQ96A08 127 aa8.46□□□□□ -1.06
CD44-203ENST00000278386 RMI2Q96E14 147 aa8.46□□□□□ -1.06
CD44-203ENST00000278386 ZC2HC1AQ96GY0 325 aa8.46□□□□□ -1.06
CD44-203ENST00000278386 A0A087WWL8 130 aa8.45□□□□□ -1.06
CD44-203ENST00000278386 TMSB15BA0A087X1C1 80 aa8.45□□□□□ -1.06
CD44-203ENST00000278386 M0R381 172 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms