RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 ZDBF2Q9HCK1 2354 aa6.83□□□□□ -1.32
CTDSPL-201ENST00000273179 A0A1B0GUT8 65 aa6.83□□□□□ -1.32
CTDSPL-201ENST00000273179 EBI3Q14213 229 aa6.83□□□□□ -1.32
CTDSPL-201ENST00000273179 TRAV13-2A0A0B4J235 113 aa6.83□□□□□ -1.32
CTDSPL-201ENST00000273179 PIK3CD-AS1Q5SR53 167 aa6.83□□□□□ -1.32
CTDSPL-201ENST00000273179 POM121L12Q8N7R1 296 aa6.83□□□□□ -1.32
CTDSPL-201ENST00000273179 OVOL2Q9BRP0 275 aa6.83□□□□□ -1.32
CTDSPL-201ENST00000273179 SMIM27A0A1W2PRY6 76 aa6.83□□□□□ -1.32
CTDSPL-201ENST00000273179 CD24P25063 80 aa6.83□□□□□ -1.32
CTDSPL-201ENST00000273179 NDUFA11Q86Y39 141 aa6.83□□□□□ -1.32
CTDSPL-201ENST00000273179 ESPL1Q14674 2120 aa6.83□□□□□ -1.32
CTDSPL-201ENST00000273179 PCDH15Q96QU1 1955 aa6.82□□□□□ -1.32
CTDSPL-201ENST00000273179 C7orf65Q6ZTY9 151 aa6.82□□□□□ -1.32
CTDSPL-201ENST00000273179 RPP21Q9H633 154 aaKnown RBP6.82□□□□□ -1.32
CTDSPL-201ENST00000273179 DNAJC13O75165 2243 aa6.82□□□□□ -1.32
CTDSPL-201ENST00000273179 KNTC1P50748 2209 aa6.82□□□□□ -1.32
CTDSPL-201ENST00000273179 FHL2Q14192 279 aa6.82□□□□□ -1.32
CTDSPL-201ENST00000273179 C18orf12Q96KH6 178 aa6.82□□□□□ -1.32
CTDSPL-201ENST00000273179 RP1L1Q8IWN7 2480 aaPredicted RBP6.82□□□□□ -1.32
CTDSPL-201ENST00000273179 IGHV3-15A0A0B4J1V0 119 aa6.82□□□□□ -1.32
CTDSPL-201ENST00000273179 EGR2P11161 476 aaPredicted RBP6.82□□□□□ -1.32
CTDSPL-201ENST00000273179 ZFHX4Q86UP3 3567 aa6.82□□□□□ -1.32
CTDSPL-201ENST00000273179 IGKV1D-8A0A087WSZ0 117 aa6.82□□□□□ -1.32
CTDSPL-201ENST00000273179 TRAV3A0A0B4J244 114 aa6.82□□□□□ -1.32
CTDSPL-201ENST00000273179 TRBV12-3P01733 135 aa6.82□□□□□ -1.32
CTDSPL-201ENST00000273179 ZNF80P51504 273 aaPredicted RBP6.82□□□□□ -1.32
CTDSPL-201ENST00000273179 BSPH1Q075Z2 132 aa6.82□□□□□ -1.32
CTDSPL-201ENST00000273179 C6orf223Q8N319 242 aa6.82□□□□□ -1.32
CTDSPL-201ENST00000273179 FAM120AOSQ5T036 256 aa6.81□□□□□ -1.32
CTDSPL-201ENST00000273179 PIFOQ8TCI5 191 aa6.81□□□□□ -1.32
CTDSPL-201ENST00000273179 C17orf82Q86X59 251 aaPredicted RBP6.81□□□□□ -1.32
CTDSPL-201ENST00000273179 LINC01356Q8N9X3 169 aa6.81□□□□□ -1.32
CTDSPL-201ENST00000273179 ZNF32P17041 273 aa6.81□□□□□ -1.32
CTDSPL-201ENST00000273179 NPPCP23582 126 aa6.81□□□□□ -1.32
CTDSPL-201ENST00000273179 UNQ9165/PRO28630Q6UXU0 137 aa6.81□□□□□ -1.32
CTDSPL-201ENST00000273179 ZFAND3Q9H8U3 227 aa6.81□□□□□ -1.32
CTDSPL-201ENST00000273179 RP1P56715 2156 aa6.81□□□□□ -1.32
CTDSPL-201ENST00000273179 NCOR1O75376 2440 aa6.8□□□□□ -1.32
CTDSPL-201ENST00000273179 IGLV3-12A0A075B6K2 115 aa6.8□□□□□ -1.32
CTDSPL-201ENST00000273179 PRM2P04554 102 aa6.8□□□□□ -1.32
CTDSPL-201ENST00000273179 PVRIGQ6DKI7 326 aa6.8□□□□□ -1.32
CTDSPL-201ENST00000273179 SCXQ7RTU7 201 aa6.8□□□□□ -1.32
CTDSPL-201ENST00000273179 CYYR1Q96J86 154 aa6.8□□□□□ -1.32
CTDSPL-201ENST00000273179 PHLDA3Q9Y5J5 127 aa6.8□□□□□ -1.32
CTDSPL-201ENST00000273179 LINC01548A6NM66 108 aa6.8□□□□□ -1.32
CTDSPL-201ENST00000273179 FAM27BQ5VT28 67 aa6.8□□□□□ -1.32
CTDSPL-201ENST00000273179 FAM30AQ9NZY2 134 aa6.8□□□□□ -1.32
CTDSPL-201ENST00000273179 PLCE1Q9P212 2302 aa6.8□□□□□ -1.32
CTDSPL-201ENST00000273179 UBE2D3P61077 147 aa6.8□□□□□ -1.32
CTDSPL-201ENST00000273179 UBE2D2P62837 147 aa6.8□□□□□ -1.32
CTDSPL-201ENST00000273179 A0A0G2JNJ9 132 aa6.8□□□□□ -1.32
CTDSPL-201ENST00000273179 DEFA4P12838 97 aa6.8□□□□□ -1.32
CTDSPL-201ENST00000273179 Q8IYB0 196 aa6.8□□□□□ -1.32
CTDSPL-201ENST00000273179 TIMM21Q9BVV7 248 aa6.8□□□□□ -1.32
CTDSPL-201ENST00000273179 ZNF492Q9P255 531 aa6.8□□□□□ -1.32
CTDSPL-201ENST00000273179 Q9UFV3 132 aa6.8□□□□□ -1.32
CTDSPL-201ENST00000273179 PHF3Q92576 2039 aaKnown RBP6.79□□□□□ -1.32
CTDSPL-201ENST00000273179 LINC00269Q8N2A0 174 aa6.79□□□□□ -1.32
CTDSPL-201ENST00000273179 PI4KAP42356 2102 aa6.79□□□□□ -1.32
CTDSPL-201ENST00000273179 FAM223BA6NKX1 122 aa6.79□□□□□ -1.32
CTDSPL-201ENST00000273179 SOCS3O14543 225 aa6.79□□□□□ -1.32
CTDSPL-201ENST00000273179 CCL3P10147 92 aa6.79□□□□□ -1.32
CTDSPL-201ENST00000273179 ZNF843Q8N446 348 aa6.79□□□□□ -1.32
CTDSPL-201ENST00000273179 Q8N8P6 123 aa6.79□□□□□ -1.32
CTDSPL-201ENST00000273179 NRACQ8N912 160 aa6.79□□□□□ -1.32
CTDSPL-201ENST00000273179 CNEP1R1Q8N9A8 125 aa6.79□□□□□ -1.32
CTDSPL-201ENST00000273179 FDCSPQ8NFU4 85 aa6.79□□□□□ -1.32
CTDSPL-201ENST00000273179 TM2D3Q9BRN9 247 aa6.79□□□□□ -1.32
CTDSPL-201ENST00000273179 LRCOL1A6NCL2 159 aa6.79□□□□□ -1.32
CTDSPL-201ENST00000273179 IGHV3-9P01782 118 aa6.79□□□□□ -1.32
CTDSPL-201ENST00000273179 TFF3Q07654 80 aa6.79□□□□□ -1.32
CTDSPL-201ENST00000273179 C2orf83Q53S99 150 aa6.79□□□□□ -1.32
CTDSPL-201ENST00000273179 HOXA4Q00056 320 aaPredicted RBP6.78□□□□□ -1.32
CTDSPL-201ENST00000273179 MRPL51Q4U2R6 128 aaKnown RBP6.78□□□□□ -1.32
CTDSPL-201ENST00000273179 ODF3L1Q8IXM7 274 aa6.78□□□□□ -1.32
CTDSPL-201ENST00000273179 ZNF295-AS1Q8N0V1 137 aa6.78□□□□□ -1.32
CTDSPL-201ENST00000273179 KLK15Q9H2R5 256 aa6.78□□□□□ -1.32
CTDSPL-201ENST00000273179 A0A087WVE0 104 aa6.78□□□□□ -1.32
CTDSPL-201ENST00000273179 UBL5Q9BZL1 73 aa6.78□□□□□ -1.32
CTDSPL-201ENST00000273179 PROK2Q9HC23 129 aa6.78□□□□□ -1.32
CTDSPL-201ENST00000273179 BOD1L1Q8NFC6 3051 aa6.78□□□□□ -1.32
CTDSPL-201ENST00000273179 LHFPL6Q9Y693 200 aa6.78□□□□□ -1.32
CTDSPL-201ENST00000273179 GPR179Q6PRD1 2367 aa6.78□□□□□ -1.32
CTDSPL-201ENST00000273179 IGKV2D-26A0A0A0MRZ7 120 aa6.78□□□□□ -1.32
CTDSPL-201ENST00000273179 IGLV3-32A0A0A0MS00 114 aa6.78□□□□□ -1.32
CTDSPL-201ENST00000273179 IGKV1D-43A0A0B4J1Z2 117 aa6.78□□□□□ -1.32
CTDSPL-201ENST00000273179 CCL4P13236 92 aa6.78□□□□□ -1.32
CTDSPL-201ENST00000273179 C19orf54Q5BKX5 351 aa6.78□□□□□ -1.32
CTDSPL-201ENST00000273179 ITLN1Q8WWA0 313 aa6.78□□□□□ -1.32
CTDSPL-201ENST00000273179 ITLN2Q8WWU7 325 aaPredicted RBP6.78□□□□□ -1.32
CTDSPL-201ENST00000273179 Q96M66 194 aa6.78□□□□□ -1.32
CTDSPL-201ENST00000273179 MRPL35Q9NZE8 188 aaKnown RBP6.78□□□□□ -1.32
CTDSPL-201ENST00000273179 TMEM223A0PJW6 202 aa6.77□□□□□ -1.33
CTDSPL-201ENST00000273179 TMEM14DPA8MWL7 114 aa6.77□□□□□ -1.33
CTDSPL-201ENST00000273179 BUB1B-PAK6H3BSN5 160 aa6.77□□□□□ -1.33
CTDSPL-201ENST00000273179 GDF5OSQ5U4N7 250 aa6.77□□□□□ -1.33
CTDSPL-201ENST00000273179 DEFB123Q8N688 67 aa6.77□□□□□ -1.33
CTDSPL-201ENST00000273179 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.77□□□□□ -1.33
CTDSPL-201ENST00000273179 ARRDC1-AS1Q9H2J1 176 aa6.77□□□□□ -1.33
CTDSPL-201ENST00000273179 PRB2P02812 416 aaPredicted RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms