RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 GFRA4Q9GZZ7 299 aa5.92□□□□□ -1.46
RIF1-201ENST00000243326 C20orf78Q9BR46 151 aa5.92□□□□□ -1.46
RIF1-201ENST00000243326 BPESC1Q9GZL8 116 aa5.92□□□□□ -1.46
RIF1-201ENST00000243326 F8W1H4 67 aa5.91□□□□□ -1.46
RIF1-201ENST00000243326 XCL1P47992 114 aa5.91□□□□□ -1.46
RIF1-201ENST00000243326 GTSF1Q8WW33 167 aa5.91□□□□□ -1.46
RIF1-201ENST00000243326 C22orf46C9J442 243 aa5.91□□□□□ -1.46
RIF1-201ENST00000243326 LOXP28300 417 aaPredicted RBP5.91□□□□□ -1.46
RIF1-201ENST00000243326 C9orf139Q6ZV77 190 aa5.91□□□□□ -1.46
RIF1-201ENST00000243326 OBSL1O75147 1896 aa5.91□□□□□ -1.46
RIF1-201ENST00000243326 PROP1O75360 226 aa5.91□□□□□ -1.46
RIF1-201ENST00000243326 APRG1Q8IVJ8 170 aa5.91□□□□□ -1.46
RIF1-201ENST00000243326 LYPD6BQ8NI32 183 aa5.91□□□□□ -1.46
RIF1-201ENST00000243326 Q6ZS49 121 aa5.91□□□□□ -1.46
RIF1-201ENST00000243326 COL4A3Q01955 1670 aa5.91□□□□□ -1.46
RIF1-201ENST00000243326 H3BRN7 92 aa5.91□□□□□ -1.46
RIF1-201ENST00000243326 PATE2Q6UY27 113 aa5.91□□□□□ -1.46
RIF1-201ENST00000243326 FOXL2NBQ6ZUU3 175 aa5.91□□□□□ -1.46
RIF1-201ENST00000243326 RNF223E7ERA6 249 aa5.91□□□□□ -1.46
RIF1-201ENST00000243326 SMIM2Q9BVW6 85 aa5.91□□□□□ -1.46
RIF1-201ENST00000243326 AGPAT4-IT1Q9H0P7 198 aa5.91□□□□□ -1.46
RIF1-201ENST00000243326 ANAPC1Q9H1A4 1944 aa5.91□□□□□ -1.46
RIF1-201ENST00000243326 C5orf38Q86SI9 138 aa5.91□□□□□ -1.46
RIF1-201ENST00000243326 CR1LQ2VPA4 569 aa5.91□□□□□ -1.46
RIF1-201ENST00000243326 MRPL36Q9P0J6 103 aaKnown RBP5.91□□□□□ -1.46
RIF1-201ENST00000243326 TRBV7-1A0A0A6YYK4 115 aa5.9□□□□□ -1.46
RIF1-201ENST00000243326 LYPD6Q86Y78 171 aa5.9□□□□□ -1.46
RIF1-201ENST00000243326 hADV29S1A0JD25 119 aa5.9□□□□□ -1.46
RIF1-201ENST00000243326 SOCS3O14543 225 aa5.9□□□□□ -1.46
RIF1-201ENST00000243326 CEMP1Q6PRD7 247 aaPredicted RBP5.9□□□□□ -1.46
RIF1-201ENST00000243326 K7EM74 188 aa5.9□□□□□ -1.46
RIF1-201ENST00000243326 CHD8Q9HCK8 2581 aa5.9□□□□□ -1.46
RIF1-201ENST00000243326 FAM236AA0A1B0GUQ0 79 aa5.9□□□□□ -1.46
RIF1-201ENST00000243326 FAM236BA0A1B0GV22 79 aa5.9□□□□□ -1.46
RIF1-201ENST00000243326 Q8TCH9 128 aa5.9□□□□□ -1.46
RIF1-201ENST00000243326 IGF2BP2-AS1Q96M15 143 aa5.9□□□□□ -1.46
RIF1-201ENST00000243326 SPATA12Q7Z6I5 190 aa5.9□□□□□ -1.46
RIF1-201ENST00000243326 TANC1Q9C0D5 1861 aa5.9□□□□□ -1.47
RIF1-201ENST00000243326 NCR3O14931 201 aa5.9□□□□□ -1.47
RIF1-201ENST00000243326 A4D1N5 150 aa5.9□□□□□ -1.47
RIF1-201ENST00000243326 KLF5Q13887 457 aaPredicted RBP5.9□□□□□ -1.47
RIF1-201ENST00000243326 PRSS33Q8NF86 280 aa5.9□□□□□ -1.47
RIF1-201ENST00000243326 IGLV3-9A0A075B6K5 115 aa5.9□□□□□ -1.47
RIF1-201ENST00000243326 CFC1BP0CG36 223 aa5.9□□□□□ -1.47
RIF1-201ENST00000243326 CFC1P0CG37 223 aa5.9□□□□□ -1.47
RIF1-201ENST00000243326 A0A0J9YXV3 536 aa5.9□□□□□ -1.47
RIF1-201ENST00000243326 FAM231DQ6ZW35 169 aa5.9□□□□□ -1.47
RIF1-201ENST00000243326 A0A1B0GX51 115 aa5.89□□□□□ -1.47
RIF1-201ENST00000243326 A0A0U1RQV1 116 aa5.89□□□□□ -1.47
RIF1-201ENST00000243326 ZNF493Q6ZR52 646 aa5.89□□□□□ -1.47
RIF1-201ENST00000243326 DEFB121Q5J5C9 76 aa5.89□□□□□ -1.47
RIF1-201ENST00000243326 C17orf82Q86X59 251 aaPredicted RBP5.89□□□□□ -1.47
RIF1-201ENST00000243326 SS18Q15532 418 aa5.89□□□□□ -1.47
RIF1-201ENST00000243326 Q9HAA7 133 aa5.89□□□□□ -1.47
RIF1-201ENST00000243326 E7EUB6 86 aa5.89□□□□□ -1.47
RIF1-201ENST00000243326 C11orf53Q8IXP5 236 aa5.89□□□□□ -1.47
RIF1-201ENST00000243326 KIAA1549LQ6ZVL6 1849 aa5.89□□□□□ -1.47
RIF1-201ENST00000243326 F5H768 121 aa5.89□□□□□ -1.47
RIF1-201ENST00000243326 COX7B2Q8TF08 81 aa5.89□□□□□ -1.47
RIF1-201ENST00000243326 FNDC10F2Z333 226 aa5.89□□□□□ -1.47
RIF1-201ENST00000243326 LY6G6EA0A0G2JKS1 128 aa5.89□□□□□ -1.47
RIF1-201ENST00000243326 Q9H8V8 135 aa5.89□□□□□ -1.47
RIF1-201ENST00000243326 U3KQA8 63 aa5.89□□□□□ -1.47
RIF1-201ENST00000243326 C11orf52Q96A22 123 aa5.88□□□□□ -1.47
RIF1-201ENST00000243326 F8VRH5 84 aa5.88□□□□□ -1.47
RIF1-201ENST00000243326 G3V4G9 280 aa5.88□□□□□ -1.47
RIF1-201ENST00000243326 P0DMU3 169 aa5.88□□□□□ -1.47
RIF1-201ENST00000243326 FAM231AP0DMU4 169 aa5.88□□□□□ -1.47
RIF1-201ENST00000243326 FAM231CP0DMU5 169 aa5.88□□□□□ -1.47
RIF1-201ENST00000243326 PRR20EP86478 221 aa5.88□□□□□ -1.47
RIF1-201ENST00000243326 PRR20CP86479 221 aa5.88□□□□□ -1.47
RIF1-201ENST00000243326 PRR20DP86480 221 aa5.88□□□□□ -1.47
RIF1-201ENST00000243326 PRR20BP86481 221 aa5.88□□□□□ -1.47
RIF1-201ENST00000243326 PRR20AP86496 221 aa5.88□□□□□ -1.47
RIF1-201ENST00000243326 UBE2DNLQ8IWF7 75 aa5.88□□□□□ -1.47
RIF1-201ENST00000243326 BAHCC1Q9P281 2608 aa5.88□□□□□ -1.47
RIF1-201ENST00000243326 HERV-K104P63124 156 aa5.88□□□□□ -1.47
RIF1-201ENST00000243326 ZFP2Q6ZN57 461 aa5.88□□□□□ -1.47
RIF1-201ENST00000243326 FOXI2Q6ZQN5 318 aa5.88□□□□□ -1.47
RIF1-201ENST00000243326 CTSZQ9UBR2 303 aa5.88□□□□□ -1.47
RIF1-201ENST00000243326 IGHG3P01860 377 aa5.88□□□□□ -1.47
RIF1-201ENST00000243326 IGLV2-14P01704 120 aa5.87□□□□□ -1.47
RIF1-201ENST00000243326 IGHV1OR15-1A0A075B7D0 117 aa5.87□□□□□ -1.47
RIF1-201ENST00000243326 LYPD1Q8N2G4 141 aa5.87□□□□□ -1.47
RIF1-201ENST00000243326 NDUFS5O43920 106 aa5.87□□□□□ -1.47
RIF1-201ENST00000243326 ODF3L1Q8IXM7 274 aa5.87□□□□□ -1.47
RIF1-201ENST00000243326 TMEM141Q96I45 108 aa5.87□□□□□ -1.47
RIF1-201ENST00000243326 TCTEX1D4Q5JR98 221 aa5.87□□□□□ -1.47
RIF1-201ENST00000243326 THAP8Q8NA92 274 aa5.87□□□□□ -1.47
RIF1-201ENST00000243326 NUP210Q8TEM1 1887 aaPredicted RBP5.87□□□□□ -1.47
RIF1-201ENST00000243326 LINC00322Q6ZN03 302 aaPredicted RBP5.87□□□□□ -1.47
RIF1-201ENST00000243326 ZNF491Q8N8L2 437 aa5.87□□□□□ -1.47
RIF1-201ENST00000243326 MAST4O15021 2626 aa5.87□□□□□ -1.47
RIF1-201ENST00000243326 NBL1P41271 181 aa5.86□□□□□ -1.47
RIF1-201ENST00000243326 TP53TG3Q9ULZ0 132 aa5.86□□□□□ -1.47
RIF1-201ENST00000243326 MLST8Q9BVC4 326 aa5.86□□□□□ -1.47
RIF1-201ENST00000243326 U3KQE9 123 aa5.86□□□□□ -1.47
RIF1-201ENST00000243326 DEFB4AO15263 64 aa5.86□□□□□ -1.47
RIF1-201ENST00000243326 TMEM243Q9BU79 118 aa5.86□□□□□ -1.47
RIF1-201ENST00000243326 ATRQ13535 2644 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms