RNA–Protein interactions for RNA: ENST00000223129.8

RPA3-201, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA3, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-201ENST00000223129 ZNF575Q86XF7 245 aa10.7□□□□□ -0.7
RPA3-201ENST00000223129 GRIFINA4D1Z8 144 aa10.69□□□□□ -0.7
RPA3-201ENST00000223129 TCL1AP56279 114 aa10.69□□□□□ -0.7
RPA3-201ENST00000223129 ZNF415Q09FC8 603 aa10.69□□□□□ -0.7
RPA3-201ENST00000223129 C12orf74Q32Q52 190 aa10.69□□□□□ -0.7
RPA3-201ENST00000223129 URGCP-MRPS24S4R325 110 aa10.69□□□□□ -0.7
RPA3-201ENST00000223129 IFITM10A6NMD0 228 aa10.68□□□□□ -0.7
RPA3-201ENST00000223129 DEFB130BP0DP73 79 aa10.68□□□□□ -0.7
RPA3-201ENST00000223129 DEFB130AP0DP74 79 aa10.68□□□□□ -0.7
RPA3-201ENST00000223129 CTDSP1Q9GZU7 261 aa10.68□□□□□ -0.7
RPA3-201ENST00000223129 LYRM9A8MSI8 78 aa10.68□□□□□ -0.7
RPA3-201ENST00000223129 HIST1H2BKO60814 126 aa10.68□□□□□ -0.7
RPA3-201ENST00000223129 HIST1H2BJP06899 126 aa10.68□□□□□ -0.7
RPA3-201ENST00000223129 HIST1H2BOP23527 126 aa10.68□□□□□ -0.7
RPA3-201ENST00000223129 HIST1H2BBP33778 126 aa10.68□□□□□ -0.7
RPA3-201ENST00000223129 HIST1H2BDP58876 126 aa10.68□□□□□ -0.7
RPA3-201ENST00000223129 HIST1H2BCP62807 126 aa10.68□□□□□ -0.7
RPA3-201ENST00000223129 DAZ2Q13117 558 aaKnown RBP10.68□□□□□ -0.7
RPA3-201ENST00000223129 HIST2H2BEQ16778 126 aa10.68□□□□□ -0.7
RPA3-201ENST00000223129 LINC01559Q495D7 138 aa10.68□□□□□ -0.7
RPA3-201ENST00000223129 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.68□□□□□ -0.7
RPA3-201ENST00000223129 HIST1H2BHQ93079 126 aa10.68□□□□□ -0.7
RPA3-201ENST00000223129 FAM210BQ96KR6 192 aa10.68□□□□□ -0.7
RPA3-201ENST00000223129 HIST1H2BNQ99877 126 aa10.68□□□□□ -0.7
RPA3-201ENST00000223129 HIST1H2BMQ99879 126 aa10.68□□□□□ -0.7
RPA3-201ENST00000223129 C19orf71A6NCJ1 209 aa10.67□□□□□ -0.7
RPA3-201ENST00000223129 Q6ZTC4 211 aa10.67□□□□□ -0.7
RPA3-201ENST00000223129 Q6ZTI0 123 aa10.67□□□□□ -0.7
RPA3-201ENST00000223129 DAZAP1Q96EP5 407 aaKnown RBP10.67□□□□□ -0.7
RPA3-201ENST00000223129 GAGE12BA1L429 117 aa10.67□□□□□ -0.7
RPA3-201ENST00000223129 PPP1R2P9O14990 202 aa10.67□□□□□ -0.7
RPA3-201ENST00000223129 GAGE7O76087 117 aa10.67□□□□□ -0.7
RPA3-201ENST00000223129 TRGC2P03986 189 aa10.67□□□□□ -0.7
RPA3-201ENST00000223129 GAGE12FP0CL80 117 aa10.67□□□□□ -0.7
RPA3-201ENST00000223129 GAGE12GP0CL81 117 aa10.67□□□□□ -0.7
RPA3-201ENST00000223129 GAGE12IP0CL82 117 aa10.67□□□□□ -0.7
RPA3-201ENST00000223129 RNASE3P12724 160 aaKnown RBP10.67□□□□□ -0.7
RPA3-201ENST00000223129 PYY3Q5JQD4 70 aa10.67□□□□□ -0.7
RPA3-201ENST00000223129 DNLZQ5SXM8 178 aa10.67□□□□□ -0.7
RPA3-201ENST00000223129 LINC01551Q86U37 167 aa10.67□□□□□ -0.7
RPA3-201ENST00000223129 NUDT10Q8NFP7 164 aa10.67□□□□□ -0.7
RPA3-201ENST00000223129 NUDT11Q96G61 164 aa10.67□□□□□ -0.7
RPA3-201ENST00000223129 RNASE7Q9H1E1 156 aaKnown RBP10.67□□□□□ -0.7
RPA3-201ENST00000223129 MRPL16Q9NX20 251 aaKnown RBP10.67□□□□□ -0.7
RPA3-201ENST00000223129 TRBV24-1A0A075B6N3 115 aa10.66□□□□□ -0.7
RPA3-201ENST00000223129 TRGV1A0A0A0MS02 117 aa10.66□□□□□ -0.7
RPA3-201ENST00000223129 GATCO43716 136 aaKnown RBP10.66□□□□□ -0.7
RPA3-201ENST00000223129 DAD1P61803 113 aa10.66□□□□□ -0.7
RPA3-201ENST00000223129 TMEM241Q24JQ0 296 aa10.66□□□□□ -0.7
RPA3-201ENST00000223129 MUC7Q8TAX7 377 aa10.66□□□□□ -0.7
RPA3-201ENST00000223129 LY96Q9Y6Y9 160 aa10.66□□□□□ -0.7
RPA3-201ENST00000223129 CSMD3Q7Z407 3707 aa10.66□□□□□ -0.7
RPA3-201ENST00000223129 SPINK4O60575 86 aa10.65□□□□□ -0.7
RPA3-201ENST00000223129 S100A4P26447 101 aaKnown RBP10.65□□□□□ -0.7
RPA3-201ENST00000223129 ASIPP42127 132 aa10.65□□□□□ -0.7
RPA3-201ENST00000223129 HIST3H2BBQ8N257 126 aa10.65□□□□□ -0.7
RPA3-201ENST00000223129 TEX48A0A1B0GUV7 120 aa10.65□□□□□ -0.71
RPA3-201ENST00000223129 P01737 135 aa10.65□□□□□ -0.71
RPA3-201ENST00000223129 TRGC1P0CF51 173 aa10.65□□□□□ -0.71
RPA3-201ENST00000223129 ZFAND6Q6FIF0 208 aa10.65□□□□□ -0.71
RPA3-201ENST00000223129 OR2D3Q8NGH3 330 aa10.65□□□□□ -0.71
RPA3-201ENST00000223129 C9orf85Q96MD7 179 aa10.65□□□□□ -0.71
RPA3-201ENST00000223129 SPXQ9BT56 116 aa10.65□□□□□ -0.71
RPA3-201ENST00000223129 NAT8Q9UHE5 227 aa10.65□□□□□ -0.71
RPA3-201ENST00000223129 STARD9Q9P2P6 4700 aa10.65□□□□□ -0.71
RPA3-201ENST00000223129 MUC4Q99102 2169 aa10.64□□□□□ -0.71
RPA3-201ENST00000223129 H3BVH4 76 aa10.64□□□□□ -0.71
RPA3-201ENST00000223129 ARMS2P0C7Q2 107 aa10.64□□□□□ -0.71
RPA3-201ENST00000223129 GZMBP10144 247 aa10.64□□□□□ -0.71
RPA3-201ENST00000223129 RPL23P62829 140 aaKnown RBP10.64□□□□□ -0.71
RPA3-201ENST00000223129 LINC00612Q8N6U2 182 aa10.64□□□□□ -0.71
RPA3-201ENST00000223129 OR10D4PQ8NGN7 298 aa10.64□□□□□ -0.71
RPA3-201ENST00000223129 PHLDA1Q8WV24 401 aaPredicted RBP10.63□□□□□ -0.71
RPA3-201ENST00000223129 FRZBQ92765 325 aa10.63□□□□□ -0.71
RPA3-201ENST00000223129 ADIRFQ15847 76 aa10.63□□□□□ -0.71
RPA3-201ENST00000223129 IL36BQ9NZH7 164 aa10.63□□□□□ -0.71
RPA3-201ENST00000223129 M0R2P5 195 aa10.62□□□□□ -0.71
RPA3-201ENST00000223129 PHOX2AO14813 284 aa10.62□□□□□ -0.71
RPA3-201ENST00000223129 HTN3P15516 51 aa10.62□□□□□ -0.71
RPA3-201ENST00000223129 ERVFC1-1P60608 527 aa10.62□□□□□ -0.71
RPA3-201ENST00000223129 LGALS9BQ3B8N2 356 aa10.62□□□□□ -0.71
RPA3-201ENST00000223129 TRGV2A0A075B6R0 118 aa10.62□□□□□ -0.71
RPA3-201ENST00000223129 ZNF876PQ49A33 203 aa10.62□□□□□ -0.71
RPA3-201ENST00000223129 RASL10AQ92737 203 aa10.62□□□□□ -0.71
RPA3-201ENST00000223129 FAM231DQ6ZW35 169 aa10.61□□□□□ -0.71
RPA3-201ENST00000223129 LINC00469Q8N7U9 141 aa10.61□□□□□ -0.71
RPA3-201ENST00000223129 RPP21Q9H633 154 aaKnown RBP10.61□□□□□ -0.71
RPA3-201ENST00000223129 DEFB131BA0A096LNP1 70 aa10.6□□□□□ -0.71
RPA3-201ENST00000223129 MUC21A0A0G2JKD1 596 aa10.6□□□□□ -0.71
RPA3-201ENST00000223129 MUC21A0A140T8X8 626 aa10.6□□□□□ -0.71
RPA3-201ENST00000223129 TRAV10A0A0B4J240 114 aa10.6□□□□□ -0.71
RPA3-201ENST00000223129 IGHV3-53P01767 116 aa10.6□□□□□ -0.71
RPA3-201ENST00000223129 SSTP61278 116 aa10.6□□□□□ -0.71
RPA3-201ENST00000223129 DMRTA1Q5VZB9 504 aa10.6□□□□□ -0.71
RPA3-201ENST00000223129 SCRT2Q9NQ03 307 aa10.6□□□□□ -0.71
RPA3-201ENST00000223129 PHLDA3Q9Y5J5 127 aa10.6□□□□□ -0.71
RPA3-201ENST00000223129 ATP5G1P05496 136 aa10.59□□□□□ -0.71
RPA3-201ENST00000223129 RPS20P60866 119 aaKnown RBP10.59□□□□□ -0.71
RPA3-201ENST00000223129 POM121L12Q8N7R1 296 aa10.59□□□□□ -0.71
RPA3-201ENST00000223129 TPPP3Q9BW30 176 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms