RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 C5orf38Q86SI9 138 aa14.74□□□□□ -0.05
SMPD3-201ENST00000219334 SLC25A29Q8N8R3 303 aa14.74□□□□□ -0.05
SMPD3-201ENST00000219334 ZNF503Q96F45 646 aa14.74□□□□□ -0.05
SMPD3-201ENST00000219334 K7EMI3 77 aa14.74□□□□□ -0.05
SMPD3-201ENST00000219334 FRMPD3Q5JV73 1810 aa14.74□□□□□ -0.05
SMPD3-201ENST00000219334 BOD1L2Q8IYS8 172 aa14.74□□□□□ -0.05
SMPD3-201ENST00000219334 PLXNA2O75051 1894 aa14.74□□□□□ -0.05
SMPD3-201ENST00000219334 SPANXA1Q9NS26 97 aa14.74□□□□□ -0.05
SMPD3-201ENST00000219334 FGF6P10767 208 aa14.73□□□□□ -0.05
SMPD3-201ENST00000219334 SONP18583 2426 aaKnown RBP14.73□□□□□ -0.05
SMPD3-201ENST00000219334 K7EMT4 169 aa14.73□□□□□ -0.05
SMPD3-201ENST00000219334 RITA1Q96K30 269 aa14.73□□□□□ -0.05
SMPD3-201ENST00000219334 ESM1Q9NQ30 184 aa14.73□□□□□ -0.05
SMPD3-201ENST00000219334 CRYGCP07315 174 aa14.73□□□□□ -0.05
SMPD3-201ENST00000219334 PLXND1Q9Y4D7 1925 aa14.73□□□□□ -0.05
SMPD3-201ENST00000219334 NLRC5Q86WI3 1866 aa14.73□□□□□ -0.05
SMPD3-201ENST00000219334 IGKV1-17P01599 117 aa14.72□□□□□ -0.05
SMPD3-201ENST00000219334 KRTAP27-1Q3LI81 207 aa14.72□□□□□ -0.05
SMPD3-201ENST00000219334 ZNF664Q8N3J9 261 aa14.72□□□□□ -0.05
SMPD3-201ENST00000219334 INSL3P51460 131 aa14.72□□□□□ -0.05
SMPD3-201ENST00000219334 ETDCA0A1B0GVM5 59 aa14.72□□□□□ -0.05
SMPD3-201ENST00000219334 MRPL52Q86TS9 123 aaKnown RBP14.72□□□□□ -0.05
SMPD3-201ENST00000219334 C4orf3Q8WVX3 66 aa14.72□□□□□ -0.05
SMPD3-201ENST00000219334 CITED2Q99967 270 aaPredicted RBP14.72□□□□□ -0.05
SMPD3-201ENST00000219334 TIRAPP58753 221 aa14.72□□□□□ -0.05
SMPD3-201ENST00000219334 DEFB135Q30KP9 77 aa14.72□□□□□ -0.05
SMPD3-201ENST00000219334 Q8NA96 180 aa14.72□□□□□ -0.05
SMPD3-201ENST00000219334 PRORYQ9H606 182 aa14.72□□□□□ -0.05
SMPD3-201ENST00000219334 PRO1854Q9UHT4 67 aa14.72□□□□□ -0.05
SMPD3-201ENST00000219334 TECTAO75443 2155 aa14.71□□□□□ -0.05
SMPD3-201ENST00000219334 ASPHD1Q5U4P2 390 aa14.71□□□□□ -0.05
SMPD3-201ENST00000219334 CACNA1AO00555 2505 aa14.71□□□□□ -0.05
SMPD3-201ENST00000219334 IGLV10-54A0A075B6I4 117 aa14.71□□□□□ -0.05
SMPD3-201ENST00000219334 LOXL1Q08397 574 aaPredicted RBP14.71□□□□□ -0.05
SMPD3-201ENST00000219334 DAZ2Q13117 558 aaKnown RBP14.71□□□□□ -0.05
SMPD3-201ENST00000219334 DAZ4Q86SG3 579 aaKnown RBP14.71□□□□□ -0.05
SMPD3-201ENST00000219334 DAZ3Q9NR90 486 aaKnown RBP14.71□□□□□ -0.05
SMPD3-201ENST00000219334 DOCK11Q5JSL3 2073 aa14.71□□□□□ -0.05
SMPD3-201ENST00000219334 TM2D2Q9BX73 214 aa14.71□□□□□ -0.05
SMPD3-201ENST00000219334 WIPF3A6NGB9 483 aa14.71□□□□□ -0.06
SMPD3-201ENST00000219334 IGHG2P01859 326 aa14.71□□□□□ -0.06
SMPD3-201ENST00000219334 GPHB5Q86YW7 130 aa14.71□□□□□ -0.06
SMPD3-201ENST00000219334 Q6ZWC4 215 aa14.7□□□□□ -0.06
SMPD3-201ENST00000219334 Q9H8V8 135 aa14.7□□□□□ -0.06
SMPD3-201ENST00000219334 ANAPC1Q9H1A4 1944 aa14.7□□□□□ -0.06
SMPD3-201ENST00000219334 Q8N7P7 452 aa14.7□□□□□ -0.06
SMPD3-201ENST00000219334 IL17DQ8TAD2 202 aa14.7□□□□□ -0.06
SMPD3-201ENST00000219334 AMTNQ6UX39 209 aa14.7□□□□□ -0.06
SMPD3-201ENST00000219334 SPRY2O43597 315 aa14.7□□□□□ -0.06
SMPD3-201ENST00000219334 COX7A2LO14548 114 aa14.69□□□□□ -0.06
SMPD3-201ENST00000219334 DYSFO75923 2080 aa14.69□□□□□ -0.06
SMPD3-201ENST00000219334 HERV-K104P63124 156 aa14.69□□□□□ -0.06
SMPD3-201ENST00000219334 LRRC75A-AS1Q8N1F1 130 aa14.69□□□□□ -0.06
SMPD3-201ENST00000219334 UBE2V1Q13404 147 aa14.69□□□□□ -0.06
SMPD3-201ENST00000219334 CSPG4Q6UVK1 2322 aa14.69□□□□□ -0.06
SMPD3-201ENST00000219334 DLEU1O43261 78 aa14.68□□□□□ -0.06
SMPD3-201ENST00000219334 SIRPDQ9H106 197 aa14.68□□□□□ -0.06
SMPD3-201ENST00000219334 IGLV1-47P01700 117 aa14.68□□□□□ -0.06
SMPD3-201ENST00000219334 UTF1Q5T230 341 aa14.68□□□□□ -0.06
SMPD3-201ENST00000219334 DEFB105AQ8NG35 78 aa14.68□□□□□ -0.06
SMPD3-201ENST00000219334 C20orf144Q9BQM9 153 aa14.68□□□□□ -0.06
SMPD3-201ENST00000219334 TNCP24821 2201 aa14.68□□□□□ -0.06
SMPD3-201ENST00000219334 POLR3KQ9Y2Y1 108 aaPredicted RBP14.68□□□□□ -0.06
SMPD3-201ENST00000219334 PTPN13Q12923 2485 aa14.68□□□□□ -0.06
SMPD3-201ENST00000219334 MYLKQ15746 1914 aa14.67□□□□□ -0.06
SMPD3-201ENST00000219334 TRAV4A0A0B4J268 109 aa14.67□□□□□ -0.06
SMPD3-201ENST00000219334 HHLA3Q9XRX5 114 aa14.67□□□□□ -0.06
SMPD3-201ENST00000219334 hADV29S1A0JD25 119 aa14.67□□□□□ -0.06
SMPD3-201ENST00000219334 DNAJC9-AS1A6NH13 148 aa14.67□□□□□ -0.06
SMPD3-201ENST00000219334 NUP210Q8TEM1 1887 aaPredicted RBP14.67□□□□□ -0.06
SMPD3-201ENST00000219334 COX8AP10176 69 aa14.67□□□□□ -0.06
SMPD3-201ENST00000219334 IGHG4P01861 327 aa14.66□□□□□ -0.06
SMPD3-201ENST00000219334 Q6ZSR3 168 aa14.65□□□□□ -0.06
SMPD3-201ENST00000219334 K7EN84 100 aa14.65□□□□□ -0.06
SMPD3-201ENST00000219334 DEFB4AO15263 64 aa14.64□□□□□ -0.07
SMPD3-201ENST00000219334 NDUFS5O43920 106 aa14.64□□□□□ -0.07
SMPD3-201ENST00000219334 EML6Q6ZMW3 1958 aa14.64□□□□□ -0.07
SMPD3-201ENST00000219334 DKK2Q9UBU2 259 aa14.64□□□□□ -0.07
SMPD3-201ENST00000219334 MRPL36Q9P0J6 103 aaKnown RBP14.64□□□□□ -0.07
SMPD3-201ENST00000219334 BVES-AS1Q5T3Y7 98 aa14.64□□□□□ -0.07
SMPD3-201ENST00000219334 A6NDX4 124 aa14.63□□□□□ -0.07
SMPD3-201ENST00000219334 IL15RAQ13261 267 aa14.63□□□□□ -0.07
SMPD3-201ENST00000219334 Q8N1Y9 231 aa14.63□□□□□ -0.07
SMPD3-201ENST00000219334 CARD19Q96LW7 228 aa14.63□□□□□ -0.07
SMPD3-201ENST00000219334 TNFRSF13BO14836 293 aaPredicted RBP14.63□□□□□ -0.07
SMPD3-201ENST00000219334 NDUFS6O75380 124 aaKnown RBP14.63□□□□□ -0.07
SMPD3-201ENST00000219334 COX11Q9Y6N1 276 aa14.63□□□□□ -0.07
SMPD3-201ENST00000219334 IGLL5B9A064 214 aa14.62□□□□□ -0.07
SMPD3-201ENST00000219334 GATA1P15976 413 aaPredicted RBP14.62□□□□□ -0.07
SMPD3-201ENST00000219334 RPL39LQ96EH5 51 aaKnown RBP14.62□□□□□ -0.07
SMPD3-201ENST00000219334 CEND1Q8N111 149 aa14.62□□□□□ -0.07
SMPD3-201ENST00000219334 GTSF1LQ9H1H1 148 aa14.62□□□□□ -0.07
SMPD3-201ENST00000219334 IGLL1P15814 213 aa14.62□□□□□ -0.07
SMPD3-201ENST00000219334 HIST2H2BCQ6DN03 193 aa14.62□□□□□ -0.07
SMPD3-201ENST00000219334 ANKHD1Q8IWZ3 2542 aaKnown RBP14.61□□□□□ -0.07
SMPD3-201ENST00000219334 TINCRA0A1B0GVN0 87 aa14.61□□□□□ -0.07
SMPD3-201ENST00000219334 WI2-2373I1.2A0A1W2PRP0 233 aa14.61□□□□□ -0.07
SMPD3-201ENST00000219334 TEX22C9J3V5 150 aa14.61□□□□□ -0.07
SMPD3-201ENST00000219334 IGLC2P0DOY2 106 aa14.61□□□□□ -0.07
SMPD3-201ENST00000219334 IGLC3P0DOY3 106 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms