RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 MEGF9Q9H1U4 602 aa6.28□□□□□ -1.4
CDC27-201ENST00000066544 A0A087WWL8 130 aa6.28□□□□□ -1.4
CDC27-201ENST00000066544 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.28□□□□□ -1.4
CDC27-201ENST00000066544 SRSF1Q07955 248 aaKnown RBP eCLIP6.28□□□□□ -1.4
CDC27-201ENST00000066544 FAM74A4Q5TZK3 123 aa6.28□□□□□ -1.4
CDC27-201ENST00000066544 SFTA2Q6UW10 78 aa6.28□□□□□ -1.4
CDC27-201ENST00000066544 CCL19Q99731 98 aa6.28□□□□□ -1.4
CDC27-201ENST00000066544 MUC4Q99102 2169 aa6.28□□□□□ -1.4
CDC27-201ENST00000066544 TRAV21A0A0B4J279 112 aa6.28□□□□□ -1.4
CDC27-201ENST00000066544 RPL24P83731 157 aaKnown RBP6.28□□□□□ -1.4
CDC27-201ENST00000066544 DUX5Q96PT3 197 aa6.28□□□□□ -1.4
CDC27-201ENST00000066544 ZNF688P0C7X2 276 aa6.27□□□□□ -1.41
CDC27-201ENST00000066544 SUMO2P61956 95 aaKnown RBP6.27□□□□□ -1.41
CDC27-201ENST00000066544 SPOCK3Q9BQ16 436 aa6.27□□□□□ -1.41
CDC27-201ENST00000066544 PIMREGQ9BSJ6 248 aa6.27□□□□□ -1.41
CDC27-201ENST00000066544 AVPP01185 164 aa6.27□□□□□ -1.41
CDC27-201ENST00000066544 CLEC2AQ6UVW9 174 aa6.27□□□□□ -1.41
CDC27-201ENST00000066544 SMIM13P0DJ93 91 aa6.27□□□□□ -1.41
CDC27-201ENST00000066544 SRSF2Q01130 221 aaKnown RBP6.27□□□□□ -1.41
CDC27-201ENST00000066544 MTORP42345 2549 aa6.27□□□□□ -1.41
CDC27-201ENST00000066544 TRAV12-3A0A0B4J271 114 aa6.27□□□□□ -1.41
CDC27-201ENST00000066544 FAM223BA6NKX1 122 aa6.27□□□□□ -1.41
CDC27-201ENST00000066544 HTN1P15515 57 aa6.27□□□□□ -1.41
CDC27-201ENST00000066544 CDKN1BP46527 198 aa6.27□□□□□ -1.41
CDC27-201ENST00000066544 SCGB2A2Q13296 93 aa6.27□□□□□ -1.41
CDC27-201ENST00000066544 FAM223AQ8IWN6 122 aa6.27□□□□□ -1.41
CDC27-201ENST00000066544 RASL10AQ92737 203 aa6.27□□□□□ -1.41
CDC27-201ENST00000066544 TRAV12-2A0A075B6T6 113 aa6.26□□□□□ -1.41
CDC27-201ENST00000066544 SAMD5Q5TGI4 173 aa6.26□□□□□ -1.41
CDC27-201ENST00000066544 HIST1H4GQ99525 98 aa6.26□□□□□ -1.41
CDC27-201ENST00000066544 FABP2P12104 132 aa6.26□□□□□ -1.41
CDC27-201ENST00000066544 K7ERU9 68 aa6.26□□□□□ -1.41
CDC27-201ENST00000066544 LINC00477Q96M19 166 aa6.26□□□□□ -1.41
CDC27-201ENST00000066544 CYSLTR1Q9Y271 337 aa6.26□□□□□ -1.41
CDC27-201ENST00000066544 A0A1W2PPM0 123 aa6.26□□□□□ -1.41
CDC27-201ENST00000066544 NDUFA4O00483 81 aa6.26□□□□□ -1.41
CDC27-201ENST00000066544 C2orf66Q6UXQ4 117 aa6.26□□□□□ -1.41
CDC27-201ENST00000066544 CSTL1Q9H114 145 aa6.26□□□□□ -1.41
CDC27-201ENST00000066544 DPH3P1Q9H4G8 78 aa6.26□□□□□ -1.41
CDC27-201ENST00000066544 PRRC2AP48634 2157 aaKnown RBP6.25□□□□□ -1.41
CDC27-201ENST00000066544 K7EP34 96 aa6.25□□□□□ -1.41
CDC27-201ENST00000066544 CD7P09564 240 aa6.25□□□□□ -1.41
CDC27-201ENST00000066544 AMTNQ6UX39 209 aa6.25□□□□□ -1.41
CDC27-201ENST00000066544 A0A087WX48 190 aa6.25□□□□□ -1.41
CDC27-201ENST00000066544 OVOL1O14753 267 aa6.25□□□□□ -1.41
CDC27-201ENST00000066544 MRPL53Q96EL3 112 aaKnown RBP6.25□□□□□ -1.41
CDC27-201ENST00000066544 MXRA5Q9NR99 2828 aa6.25□□□□□ -1.41
CDC27-201ENST00000066544 CHTOPQ9Y3Y2 248 aaKnown RBP6.25□□□□□ -1.41
CDC27-201ENST00000066544 OR11H12B2RN74 326 aa6.25□□□□□ -1.41
CDC27-201ENST00000066544 CD300EQ496F6 205 aaPredicted RBP6.25□□□□□ -1.41
CDC27-201ENST00000066544 OR11H1Q8NG94 326 aa6.25□□□□□ -1.41
CDC27-201ENST00000066544 OR11H2Q8NH07 326 aa6.25□□□□□ -1.41
CDC27-201ENST00000066544 ZMAT4Q9H898 229 aa6.25□□□□□ -1.41
CDC27-201ENST00000066544 TEX15Q9BXT5 2789 aa6.25□□□□□ -1.41
CDC27-201ENST00000066544 HIST2H2BDQ6DRA6 164 aa6.25□□□□□ -1.41
CDC27-201ENST00000066544 ACANP16112 2415 aa6.25□□□□□ -1.41
CDC27-201ENST00000066544 SIVA1O15304 175 aa6.24□□□□□ -1.41
CDC27-201ENST00000066544 IGHV4-59P01825 116 aa6.24□□□□□ -1.41
CDC27-201ENST00000066544 PSMG4Q5JS54 123 aa6.24□□□□□ -1.41
CDC27-201ENST00000066544 FAM159AQ6UWV7 190 aa6.24□□□□□ -1.41
CDC27-201ENST00000066544 C10orf105Q8TEF2 133 aa6.24□□□□□ -1.41
CDC27-201ENST00000066544 DUSP14O95147 198 aaKnown RBP6.24□□□□□ -1.41
CDC27-201ENST00000066544 IGHG2P01859 326 aa6.24□□□□□ -1.41
CDC27-201ENST00000066544 RNASE3P12724 160 aaKnown RBP6.24□□□□□ -1.41
CDC27-201ENST00000066544 UFSP1Q6NVU6 142 aa6.24□□□□□ -1.41
CDC27-201ENST00000066544 ZNF256Q9Y2P7 627 aaPredicted RBP6.24□□□□□ -1.41
CDC27-201ENST00000066544 DAZ1Q9NQZ3 744 aaKnown RBP6.24□□□□□ -1.41
CDC27-201ENST00000066544 F8VRH5 84 aa6.24□□□□□ -1.41
CDC27-201ENST00000066544 RPL39P62891 51 aaKnown RBP6.24□□□□□ -1.41
CDC27-201ENST00000066544 KLHL30-AS1Q8NEE0 82 aa6.24□□□□□ -1.41
CDC27-201ENST00000066544 KLK9Q9UKQ9 250 aa6.24□□□□□ -1.41
CDC27-201ENST00000066544 MSMBP08118 114 aa6.24□□□□□ -1.41
CDC27-201ENST00000066544 MRAP2Q96G30 205 aa6.24□□□□□ -1.41
CDC27-201ENST00000066544 PRSS29PA6NIE9 313 aa6.23□□□□□ -1.41
CDC27-201ENST00000066544 SOCS3O14543 225 aa6.23□□□□□ -1.41
CDC27-201ENST00000066544 C19orf54Q5BKX5 351 aa6.23□□□□□ -1.41
CDC27-201ENST00000066544 SCGB1D4Q6XE38 83 aa6.23□□□□□ -1.41
CDC27-201ENST00000066544 SMPXQ9UHP9 88 aa6.23□□□□□ -1.41
CDC27-201ENST00000066544 H7C1H1 209 aa6.23□□□□□ -1.41
CDC27-201ENST00000066544 A6NDX4 124 aa6.23□□□□□ -1.41
CDC27-201ENST00000066544 ORMDL2Q53FV1 153 aa6.23□□□□□ -1.41
CDC27-201ENST00000066544 CEND1Q8N111 149 aa6.23□□□□□ -1.41
CDC27-201ENST00000066544 FBN2P35556 2912 aa6.23□□□□□ -1.41
CDC27-201ENST00000066544 USMG5Q96IX5 58 aa6.23□□□□□ -1.41
CDC27-201ENST00000066544 SPINK13Q1W4C9 94 aa6.22□□□□□ -1.41
CDC27-201ENST00000066544 PRADC1Q9BSG0 188 aa6.22□□□□□ -1.41
CDC27-201ENST00000066544 NF1P21359 2839 aa6.22□□□□□ -1.41
CDC27-201ENST00000066544 IGHV4-4A0A075B6R2 117 aa6.22□□□□□ -1.41
CDC27-201ENST00000066544 SYNJ2BPP57105 145 aa6.22□□□□□ -1.41
CDC27-201ENST00000066544 ZNF479Q96JC4 524 aa6.22□□□□□ -1.41
CDC27-201ENST00000066544 TP53TG1Q9Y2A0 90 aa6.22□□□□□ -1.41
CDC27-201ENST00000066544 SLC25A16P16260 332 aa6.22□□□□□ -1.41
CDC27-201ENST00000066544 DEFB112Q30KQ8 113 aa6.22□□□□□ -1.41
CDC27-201ENST00000066544 BAALCQ8WXS3 180 aa6.22□□□□□ -1.41
CDC27-201ENST00000066544 MDFICQ9P1T7 246 aa6.22□□□□□ -1.41
CDC27-201ENST00000066544 PLNP26678 52 aa6.22□□□□□ -1.41
CDC27-201ENST00000066544 LENEPQ9Y5L5 61 aa6.22□□□□□ -1.41
CDC27-201ENST00000066544 LINC01546A6NGU7 62 aa6.21□□□□□ -1.41
CDC27-201ENST00000066544 ZNF815PA8K554 130 aa6.21□□□□□ -1.41
CDC27-201ENST00000066544 H3BMG7 143 aa6.21□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms