RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 SPATA12Q7Z6I5 190 aa14.88□□□□□ -0.03
PCDHB11-202ENST00000624887 RNF152Q8N8N0 203 aa14.88□□□□□ -0.03
PCDHB11-202ENST00000624887 DCANP1Q8TF63 244 aa14.88□□□□□ -0.03
PCDHB11-202ENST00000624887 HSPB8Q9UJY1 196 aa14.88□□□□□ -0.03
PCDHB11-202ENST00000624887 PPBPP02775 128 aa14.87□□□□□ -0.03
PCDHB11-202ENST00000624887 SRD5A1P18405 259 aa14.87□□□□□ -0.03
PCDHB11-202ENST00000624887 KLHDC1Q8N7A1 406 aa14.87□□□□□ -0.03
PCDHB11-202ENST00000624887 UBE2E2Q96LR5 201 aa14.87□□□□□ -0.03
PCDHB11-202ENST00000624887 TRAV21A0A0B4J279 112 aa14.87□□□□□ -0.03
PCDHB11-202ENST00000624887 F6UB75 175 aa14.87□□□□□ -0.03
PCDHB11-202ENST00000624887 SNAI2O43623 268 aa14.87□□□□□ -0.03
PCDHB11-202ENST00000624887 ID1P41134 155 aa14.87□□□□□ -0.03
PCDHB11-202ENST00000624887 APRG1Q8IVJ8 170 aa14.87□□□□□ -0.03
PCDHB11-202ENST00000624887 ATOH7Q8N100 152 aa14.87□□□□□ -0.03
PCDHB11-202ENST00000624887 SELENOKQ9Y6D0 94 aa14.87□□□□□ -0.03
PCDHB11-202ENST00000624887 IGHV4-4A0A075B6R2 117 aa14.86□□□□□ -0.03
PCDHB11-202ENST00000624887 LOC389332A0A1B0GUA5 103 aa14.86□□□□□ -0.03
PCDHB11-202ENST00000624887 SMKR1H3BMG3 65 aa14.86□□□□□ -0.03
PCDHB11-202ENST00000624887 NPYP01303 97 aa14.86□□□□□ -0.03
PCDHB11-202ENST00000624887 Q8N2B8 174 aa14.86□□□□□ -0.03
PCDHB11-202ENST00000624887 OR10AG1Q8NH19 301 aa14.86□□□□□ -0.03
PCDHB11-202ENST00000624887 ORAOV1Q8WV07 137 aa14.86□□□□□ -0.03
PCDHB11-202ENST00000624887 C20orf202A1L168 122 aa14.85□□□□□ -0.03
PCDHB11-202ENST00000624887 FOXC2Q99958 501 aa14.85□□□□□ -0.03
PCDHB11-202ENST00000624887 MAP1LC3CQ9BXW4 147 aa14.85□□□□□ -0.03
PCDHB11-202ENST00000624887 J3KRW8 73 aa14.85□□□□□ -0.03
PCDHB11-202ENST00000624887 LGALS9O00182 355 aa14.85□□□□□ -0.03
PCDHB11-202ENST00000624887 NCR2O95944 276 aa14.85□□□□□ -0.03
PCDHB11-202ENST00000624887 LAMTOR2Q9Y2Q5 125 aa14.85□□□□□ -0.03
PCDHB11-202ENST00000624887 MRPS16Q9Y3D3 137 aaKnown RBP14.85□□□□□ -0.03
PCDHB11-202ENST00000624887 TRAV9-2A0A087WT02 112 aa14.84□□□□□ -0.03
PCDHB11-202ENST00000624887 CACNG7P62955 275 aa14.84□□□□□ -0.03
PCDHB11-202ENST00000624887 BATFQ16520 125 aa14.84□□□□□ -0.03
PCDHB11-202ENST00000624887 IGHV4OR15-8A0A075B7B6 117 aa14.84□□□□□ -0.03
PCDHB11-202ENST00000624887 A0A087WW49 117 aa14.84□□□□□ -0.03
PCDHB11-202ENST00000624887 TCF21O43680 179 aa14.84□□□□□ -0.03
PCDHB11-202ENST00000624887 HNRNPA3P51991 378 aaKnown RBP14.84□□□□□ -0.03
PCDHB11-202ENST00000624887 SYNJ2BPP57105 145 aa14.83□□□□□ -0.04
PCDHB11-202ENST00000624887 PET117Q6UWS5 81 aa14.83□□□□□ -0.04
PCDHB11-202ENST00000624887 ZNF747Q9BV97 191 aa14.83□□□□□ -0.04
PCDHB11-202ENST00000624887 MS4A6AQ9H2W1 248 aa14.83□□□□□ -0.04
PCDHB11-202ENST00000624887 A0A096LNJ9 63 aa14.82□□□□□ -0.04
PCDHB11-202ENST00000624887 H3BVH4 76 aa14.82□□□□□ -0.04
PCDHB11-202ENST00000624887 MAJINQ3KP22 176 aa14.82□□□□□ -0.04
PCDHB11-202ENST00000624887 SMIM15Q7Z3B0 74 aa14.82□□□□□ -0.04
PCDHB11-202ENST00000624887 WFDC3Q8IUB2 231 aa14.82□□□□□ -0.04
PCDHB11-202ENST00000624887 STPG4Q8N801 248 aa14.82□□□□□ -0.04
PCDHB11-202ENST00000624887 DUX5Q96PT3 197 aa14.82□□□□□ -0.04
PCDHB11-202ENST00000624887 OR4C46A6NHA9 309 aa14.82□□□□□ -0.04
PCDHB11-202ENST00000624887 EVI2AP22794 236 aa14.82□□□□□ -0.04
PCDHB11-202ENST00000624887 HOXD3P31249 432 aaPredicted RBP14.82□□□□□ -0.04
PCDHB11-202ENST00000624887 RNASE4P34096 147 aaKnown RBP14.82□□□□□ -0.04
PCDHB11-202ENST00000624887 SPANXN1Q5VSR9 72 aa14.82□□□□□ -0.04
PCDHB11-202ENST00000624887 Q6ZN92 141 aa14.82□□□□□ -0.04
PCDHB11-202ENST00000624887 TFPI2P48307 235 aa14.81□□□□□ -0.04
PCDHB11-202ENST00000624887 TEX29Q8N6K0 151 aa14.81□□□□□ -0.04
PCDHB11-202ENST00000624887 MAP1LC3AQ9H492 121 aa14.81□□□□□ -0.04
PCDHB11-202ENST00000624887 TIMM8BQ9Y5J9 83 aaPredicted RBP14.81□□□□□ -0.04
PCDHB11-202ENST00000624887 ZNF469Q96JG9 3925 aaPredicted RBP14.81□□□□□ -0.04
PCDHB11-202ENST00000624887 GAS8-AS1O95177 125 aa14.8□□□□□ -0.04
PCDHB11-202ENST00000624887 KLLNB2CW77 178 aa14.8□□□□□ -0.04
PCDHB11-202ENST00000624887 TNFRSF6BO95407 300 aa14.8□□□□□ -0.04
PCDHB11-202ENST00000624887 KIR3DS1Q14943 382 aa14.8□□□□□ -0.04
PCDHB11-202ENST00000624887 TMEM86BQ8N661 226 aa14.8□□□□□ -0.04
PCDHB11-202ENST00000624887 ITPR3Q14573 2671 aa14.79□□□□□ -0.04
PCDHB11-202ENST00000624887 LINC01546A6NGU7 62 aa14.79□□□□□ -0.04
PCDHB11-202ENST00000624887 ANXA2RQ3ZCQ2 193 aa14.79□□□□□ -0.04
PCDHB11-202ENST00000624887 PDZD2O15018 2839 aa14.79□□□□□ -0.04
PCDHB11-202ENST00000624887 K7EQG2 157 aa14.78□□□□□ -0.04
PCDHB11-202ENST00000624887 MED14OSP0DP75 135 aa14.78□□□□□ -0.04
PCDHB11-202ENST00000624887 IGLL1P15814 213 aa14.78□□□□□ -0.04
PCDHB11-202ENST00000624887 TSPOP30536 169 aa14.78□□□□□ -0.04
PCDHB11-202ENST00000624887 ASIPP42127 132 aa14.78□□□□□ -0.04
PCDHB11-202ENST00000624887 HBDP02042 147 aa14.78□□□□□ -0.04
PCDHB11-202ENST00000624887 SNRPD3P62318 126 aaKnown RBP14.78□□□□□ -0.04
PCDHB11-202ENST00000624887 LINC01545Q5VT33 79 aa14.78□□□□□ -0.04
PCDHB11-202ENST00000624887 ZNF688P0C7X2 276 aa14.77□□□□□ -0.04
PCDHB11-202ENST00000624887 S100A4P26447 101 aaKnown RBP14.77□□□□□ -0.04
PCDHB11-202ENST00000624887 NXT2Q9NPJ8 142 aaKnown RBP14.77□□□□□ -0.04
PCDHB11-202ENST00000624887 GCN1Q92616 2671 aaKnown RBP14.77□□□□□ -0.05
PCDHB11-202ENST00000624887 GATA1P15976 413 aaPredicted RBP14.76□□□□□ -0.05
PCDHB11-202ENST00000624887 PSMG4Q5JS54 123 aa14.76□□□□□ -0.05
PCDHB11-202ENST00000624887 SCRT2Q9NQ03 307 aa14.76□□□□□ -0.05
PCDHB11-202ENST00000624887 ODF3Q96PU9 254 aa14.76□□□□□ -0.05
PCDHB11-202ENST00000624887 H0Y8G0 127 aa14.75□□□□□ -0.05
PCDHB11-202ENST00000624887 OR2K2Q8NGT1 345 aa14.75□□□□□ -0.05
PCDHB11-202ENST00000624887 A0A0J9YX75 114 aa14.74□□□□□ -0.05
PCDHB11-202ENST00000624887 K7EP13 123 aa14.74□□□□□ -0.05
PCDHB11-202ENST00000624887 C18orf65Q6ZTR6 163 aa14.74□□□□□ -0.05
PCDHB11-202ENST00000624887 DEFB125Q8N687 156 aa14.74□□□□□ -0.05
PCDHB11-202ENST00000624887 MCRIP2Q9BUT9 160 aaKnown RBP14.74□□□□□ -0.05
PCDHB11-202ENST00000624887 COX11Q9Y6N1 276 aa14.74□□□□□ -0.05
PCDHB11-202ENST00000624887 PRSS47A8MTI9 375 aa14.74□□□□□ -0.05
PCDHB11-202ENST00000624887 GNRH2O43555 120 aa14.74□□□□□ -0.05
PCDHB11-202ENST00000624887 FXYD7P58549 80 aa14.74□□□□□ -0.05
PCDHB11-202ENST00000624887 NRACQ8N912 160 aa14.74□□□□□ -0.05
PCDHB11-202ENST00000624887 ST20Q9HBF5 79 aa14.74□□□□□ -0.05
PCDHB11-202ENST00000624887 PHLDA3Q9Y5J5 127 aa14.74□□□□□ -0.05
PCDHB11-202ENST00000624887 M0R381 172 aa14.73□□□□□ -0.05
PCDHB11-202ENST00000624887 RNASE3P12724 160 aaKnown RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms