RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 LINC00479Q96M42 142 aa2.9□□□□□ -1.95
SNCA-213ENST00000618500 ARL6Q9H0F7 186 aa2.9□□□□□ -1.95
SNCA-213ENST00000618500 MGAT4CQ9UBM8 478 aa2.9□□□□□ -1.95
SNCA-213ENST00000618500 ANKRD20A5PA0PJZ0 165 aa2.89□□□□□ -1.95
SNCA-213ENST00000618500 IGHV3-30P01768 117 aa2.89□□□□□ -1.95
SNCA-213ENST00000618500 IGHV3-33P01772 117 aa2.89□□□□□ -1.95
SNCA-213ENST00000618500 IGHV3-30-3P0DP02 117 aa2.89□□□□□ -1.95
SNCA-213ENST00000618500 IGHV3-30-5P0DP03 117 aa2.89□□□□□ -1.95
SNCA-213ENST00000618500 PRB4P10163 310 aaPredicted RBP2.89□□□□□ -1.95
SNCA-213ENST00000618500 SRSF9Q13242 221 aaKnown RBP eCLIP2.89□□□□□ -1.95
SNCA-213ENST00000618500 UFSP1Q6NVU6 142 aa2.89□□□□□ -1.95
SNCA-213ENST00000618500 CYB561D1Q8N8Q1 229 aa2.89□□□□□ -1.95
SNCA-213ENST00000618500 SLC25A29Q8N8R3 303 aa2.89□□□□□ -1.95
SNCA-213ENST00000618500 KCNS1Q96KK3 526 aa2.89□□□□□ -1.95
SNCA-213ENST00000618500 C9orf85Q96MD7 179 aa2.89□□□□□ -1.95
SNCA-213ENST00000618500 PARD6GQ9BYG4 376 aaPredicted RBP2.89□□□□□ -1.95
SNCA-213ENST00000618500 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.89□□□□□ -1.95
SNCA-213ENST00000618500 TRAV6A0A075B6T7 132 aa2.89□□□□□ -1.95
SNCA-213ENST00000618500 LOC100506127A0A0U1RQW1 187 aa2.89□□□□□ -1.95
SNCA-213ENST00000618500 C9orf118A6NHY6 69 aa2.89□□□□□ -1.95
SNCA-213ENST00000618500 RPL29P47914 159 aaKnown RBP2.89□□□□□ -1.95
SNCA-213ENST00000618500 DNLZQ5SXM8 178 aa2.89□□□□□ -1.95
SNCA-213ENST00000618500 CFAP126Q5VTH2 177 aa2.89□□□□□ -1.95
SNCA-213ENST00000618500 SNX29P2Q8IUI4 249 aa2.89□□□□□ -1.95
SNCA-213ENST00000618500 DYNC2LI1Q8TCX1 351 aa2.89□□□□□ -1.95
SNCA-213ENST00000618500 C7orf33Q8WU49 177 aa2.89□□□□□ -1.95
SNCA-213ENST00000618500 SCP2D1Q9UJQ7 156 aa2.89□□□□□ -1.95
SNCA-213ENST00000618500 LOC100131303A0A0U1RQF7 123 aa2.88□□□□□ -1.95
SNCA-213ENST00000618500 E5RGE8 158 aa2.88□□□□□ -1.95
SNCA-213ENST00000618500 AGPAT2O15120 278 aa2.88□□□□□ -1.95
SNCA-213ENST00000618500 IAPPP10997 89 aa2.88□□□□□ -1.95
SNCA-213ENST00000618500 PTTG1IPP53801 180 aa2.88□□□□□ -1.95
SNCA-213ENST00000618500 TMEM128Q5BJH2 165 aa2.88□□□□□ -1.95
SNCA-213ENST00000618500 MGST2Q99735 147 aa2.88□□□□□ -1.95
SNCA-213ENST00000618500 MED28Q9H204 178 aa2.88□□□□□ -1.95
SNCA-213ENST00000618500 AAMDCQ9H7C9 122 aa2.88□□□□□ -1.95
SNCA-213ENST00000618500 LYRM2Q9NU23 88 aaPredicted RBP2.88□□□□□ -1.95
SNCA-213ENST00000618500 SLC39A9Q9NUM3 307 aa2.88□□□□□ -1.95
SNCA-213ENST00000618500 IGHV3-64A0A075B6Q5 118 aa2.88□□□□□ -1.95
SNCA-213ENST00000618500 J3KRW8 73 aa2.88□□□□□ -1.95
SNCA-213ENST00000618500 HPGDSO60760 199 aa2.88□□□□□ -1.95
SNCA-213ENST00000618500 GZMBP10144 247 aa2.88□□□□□ -1.95
SNCA-213ENST00000618500 SCGB2B2Q4G0G5 96 aa2.88□□□□□ -1.95
SNCA-213ENST00000618500 KRTAP26-1Q6PEX3 210 aa2.88□□□□□ -1.95
SNCA-213ENST00000618500 ZNF664Q8N3J9 261 aa2.88□□□□□ -1.95
SNCA-213ENST00000618500 Q9H521 79 aa2.88□□□□□ -1.95
SNCA-213ENST00000618500 KIF25-AS1Q9Y6Z4 181 aa2.88□□□□□ -1.95
SNCA-213ENST00000618500 SFT2D2O95562 160 aa2.87□□□□□ -1.95
SNCA-213ENST00000618500 PRSS1P07477 247 aa2.87□□□□□ -1.95
SNCA-213ENST00000618500 ERCC8Q13216 396 aa2.87□□□□□ -1.95
SNCA-213ENST00000618500 MIAQ16674 131 aa2.87□□□□□ -1.95
SNCA-213ENST00000618500 FAM159AQ6UWV7 190 aa2.87□□□□□ -1.95
SNCA-213ENST00000618500 NHLRC2Q8NBF2 726 aa2.87□□□□□ -1.95
SNCA-213ENST00000618500 OR10G8Q8NGN5 311 aa2.87□□□□□ -1.95
SNCA-213ENST00000618500 Q8TAT8 98 aa2.87□□□□□ -1.95
SNCA-213ENST00000618500 CNBD2Q96M20 576 aa2.87□□□□□ -1.95
SNCA-213ENST00000618500 PARLQ9H300 379 aa2.87□□□□□ -1.95
SNCA-213ENST00000618500 DPH3P1Q9H4G8 78 aa2.87□□□□□ -1.95
SNCA-213ENST00000618500 SDF2L1Q9HCN8 221 aa2.87□□□□□ -1.95
SNCA-213ENST00000618500 PRR34Q9NV39 138 aa2.87□□□□□ -1.95
SNCA-213ENST00000618500 PSENENQ9NZ42 101 aa2.87□□□□□ -1.95
SNCA-213ENST00000618500 RSL24D1Q9UHA3 163 aaKnown RBP2.87□□□□□ -1.95
SNCA-213ENST00000618500 TRAV21A0A0B4J279 112 aa2.87□□□□□ -1.95
SNCA-213ENST00000618500 SERTM2A0A1B0GWG4 89 aa2.87□□□□□ -1.95
SNCA-213ENST00000618500 TAAR5O14804 337 aa2.87□□□□□ -1.95
SNCA-213ENST00000618500 SFTA3P0C7M3 94 aa2.87□□□□□ -1.95
SNCA-213ENST00000618500 CTAG1AP78358 180 aa2.87□□□□□ -1.95
SNCA-213ENST00000618500 TMEM97Q5BJF2 176 aa2.87□□□□□ -1.95
SNCA-213ENST00000618500 MIXL1Q9H2W2 232 aa2.87□□□□□ -1.95
SNCA-213ENST00000618500 PSORS1C2Q9UIG4 136 aa2.87□□□□□ -1.95
SNCA-213ENST00000618500 WDR83OSQ9Y284 106 aa2.87□□□□□ -1.95
SNCA-213ENST00000618500 TRBV10-1A0A0K0K1A3 114 aa2.87□□□□□ -1.95
SNCA-213ENST00000618500 A8MWV9 139 aa2.87□□□□□ -1.95
SNCA-213ENST00000618500 RHODO00212 210 aa2.87□□□□□ -1.95
SNCA-213ENST00000618500 TYMSP04818 313 aa2.87□□□□□ -1.95
SNCA-213ENST00000618500 CNPY1Q3B7I2 92 aa2.87□□□□□ -1.95
SNCA-213ENST00000618500 SPANXN5Q5MJ07 72 aa2.87□□□□□ -1.95
SNCA-213ENST00000618500 CLVS1Q8IUQ0 354 aaPredicted RBP2.87□□□□□ -1.95
SNCA-213ENST00000618500 SLC25A21Q9BQT8 299 aaPredicted RBP2.87□□□□□ -1.95
SNCA-213ENST00000618500 C20orf85Q9H1P6 137 aa2.87□□□□□ -1.95
SNCA-213ENST00000618500 C11orf1Q9H5F2 150 aa2.87□□□□□ -1.95
SNCA-213ENST00000618500 TIMM9Q9Y5J7 89 aa2.87□□□□□ -1.95
SNCA-213ENST00000618500 USP17L23D6RBM5 183 aa2.86□□□□□ -1.95
SNCA-213ENST00000618500 GOSR2O14653 212 aa2.86□□□□□ -1.95
SNCA-213ENST00000618500 IZUMO2Q6UXV1 221 aa2.86□□□□□ -1.95
SNCA-213ENST00000618500 Q6ZRG5 221 aa2.86□□□□□ -1.95
SNCA-213ENST00000618500 SLC25A2Q9BXI2 301 aa2.86□□□□□ -1.95
SNCA-213ENST00000618500 COMMD3Q9UBI1 195 aa2.86□□□□□ -1.95
SNCA-213ENST00000618500 EXTL2Q9UBQ6 330 aa2.86□□□□□ -1.95
SNCA-213ENST00000618500 IGLV10-54A0A075B6I4 117 aa2.86□□□□□ -1.95
SNCA-213ENST00000618500 LINC00310P59036 64 aa2.86□□□□□ -1.95
SNCA-213ENST00000618500 SLC38A11Q08AI6 406 aa2.86□□□□□ -1.95
SNCA-213ENST00000618500 ATP6V1FQ16864 119 aa2.86□□□□□ -1.95
SNCA-213ENST00000618500 DAZ4Q86SG3 579 aaKnown RBP2.86□□□□□ -1.95
SNCA-213ENST00000618500 FAM167A-AS1Q96KT0 104 aa2.86□□□□□ -1.95
SNCA-213ENST00000618500 SOSTQ9BQB4 213 aa2.86□□□□□ -1.95
SNCA-213ENST00000618500 DAZ3Q9NR90 486 aaKnown RBP2.86□□□□□ -1.95
SNCA-213ENST00000618500 KCNIP2Q9NS61 270 aa2.86□□□□□ -1.95
SNCA-213ENST00000618500 CCDC59Q9P031 241 aaKnown RBP2.86□□□□□ -1.95
SNCA-213ENST00000618500 IGKV2D-24A0A075B6R9 120 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms