RNA–Protein interactions for RNA: ENST00000599716.5

SHKBP1-220, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-220ENST00000599716 ZNF266Q14584 549 aa5.74□□□□□ -1.49
SHKBP1-220ENST00000599716 FAM159AQ6UWV7 190 aa5.74□□□□□ -1.49
SHKBP1-220ENST00000599716 STX12Q86Y82 276 aa5.74□□□□□ -1.49
SHKBP1-220ENST00000599716 IQCF2Q8IXL9 164 aa5.74□□□□□ -1.49
SHKBP1-220ENST00000599716 RASL10AQ92737 203 aa5.74□□□□□ -1.49
SHKBP1-220ENST00000599716 C2orf50Q96LR7 162 aa5.74□□□□□ -1.49
SHKBP1-220ENST00000599716 TXNDC17Q9BRA2 123 aa5.74□□□□□ -1.49
SHKBP1-220ENST00000599716 NUDT15Q9NV35 164 aa5.74□□□□□ -1.49
SHKBP1-220ENST00000599716 TRAV8-1A0A0A6YYK1 113 aa5.73□□□□□ -1.49
SHKBP1-220ENST00000599716 TRAV4A0A0B4J268 109 aa5.73□□□□□ -1.49
SHKBP1-220ENST00000599716 CENPXA8MT69 81 aa5.73□□□□□ -1.49
SHKBP1-220ENST00000599716 IBA57-AS1B1ANH7 110 aa5.73□□□□□ -1.49
SHKBP1-220ENST00000599716 LYRM1O43325 122 aa5.73□□□□□ -1.49
SHKBP1-220ENST00000599716 OR7C2O60412 319 aa5.73□□□□□ -1.49
SHKBP1-220ENST00000599716 ORM1P02763 201 aa5.73□□□□□ -1.49
SHKBP1-220ENST00000599716 TCRBP04435 133 aa5.73□□□□□ -1.49
SHKBP1-220ENST00000599716 TYMSP04818 313 aa5.73□□□□□ -1.49
SHKBP1-220ENST00000599716 NMBP08949 121 aa5.73□□□□□ -1.49
SHKBP1-220ENST00000599716 PVALBP20472 110 aaPredicted RBP5.73□□□□□ -1.49
SHKBP1-220ENST00000599716 IL15RAQ13261 267 aa5.73□□□□□ -1.49
SHKBP1-220ENST00000599716 OR10J3Q5JRS4 329 aa5.73□□□□□ -1.49
SHKBP1-220ENST00000599716 DPPA3Q6W0C5 159 aa5.73□□□□□ -1.49
SHKBP1-220ENST00000599716 OR5C1Q8NGR4 320 aa5.73□□□□□ -1.49
SHKBP1-220ENST00000599716 TVP23CQ96ET8 276 aa5.73□□□□□ -1.49
SHKBP1-220ENST00000599716 DNAJC30Q96LL9 226 aa5.73□□□□□ -1.49
SHKBP1-220ENST00000599716 SGK494Q96LW2 274 aa5.73□□□□□ -1.49
SHKBP1-220ENST00000599716 OR5AC2Q9NZP5 309 aa5.73□□□□□ -1.49
SHKBP1-220ENST00000599716 TRGV11A0A075B6L2 103 aa5.72□□□□□ -1.49
SHKBP1-220ENST00000599716 DIRC3C9JPN6 131 aa5.72□□□□□ -1.49
SHKBP1-220ENST00000599716 GATA1P15976 413 aaPredicted RBP5.72□□□□□ -1.49
SHKBP1-220ENST00000599716 GNG5P63218 68 aa5.72□□□□□ -1.49
SHKBP1-220ENST00000599716 UBE2L3P68036 154 aaKnown RBP5.72□□□□□ -1.49
SHKBP1-220ENST00000599716 HBG1P69891 147 aa5.72□□□□□ -1.49
SHKBP1-220ENST00000599716 HBG2P69892 147 aa5.72□□□□□ -1.49
SHKBP1-220ENST00000599716 LRRC37A5PQ49AS3 106 aa5.72□□□□□ -1.49
SHKBP1-220ENST00000599716 LINC01556Q5JQF7 62 aa5.72□□□□□ -1.49
SHKBP1-220ENST00000599716 Q6AWC8 147 aa5.72□□□□□ -1.49
SHKBP1-220ENST00000599716 C10orf126Q8N4M7 172 aa5.72□□□□□ -1.49
SHKBP1-220ENST00000599716 SLC25A29Q8N8R3 303 aa5.72□□□□□ -1.49
SHKBP1-220ENST00000599716 TMEM75Q8N9X5 138 aa5.72□□□□□ -1.49
SHKBP1-220ENST00000599716 NTN5Q8WTR8 489 aaPredicted RBP5.72□□□□□ -1.49
SHKBP1-220ENST00000599716 CHAC2Q8WUX2 184 aa5.72□□□□□ -1.49
SHKBP1-220ENST00000599716 Q9UF83 564 aa5.72□□□□□ -1.49
SHKBP1-220ENST00000599716 H0YIZ8 118 aa5.71□□□□□ -1.5
SHKBP1-220ENST00000599716 M0R2P5 195 aa5.71□□□□□ -1.5
SHKBP1-220ENST00000599716 H2AFB2P0C5Z0 115 aa5.71□□□□□ -1.5
SHKBP1-220ENST00000599716 CSN1S1P47710 185 aa5.71□□□□□ -1.5
SHKBP1-220ENST00000599716 ATP6V1FQ16864 119 aa5.71□□□□□ -1.5
SHKBP1-220ENST00000599716 GOLT1AQ6ZVE7 132 aa5.71□□□□□ -1.5
SHKBP1-220ENST00000599716 SCXQ7RTU7 201 aa5.71□□□□□ -1.5
SHKBP1-220ENST00000599716 BAALCQ8WXS3 180 aa5.71□□□□□ -1.5
SHKBP1-220ENST00000599716 SPXQ9BT56 116 aa5.71□□□□□ -1.5
SHKBP1-220ENST00000599716 C11orf21Q9P2W6 132 aa5.71□□□□□ -1.5
SHKBP1-220ENST00000599716 TRAV8-6A0A0B4J262 113 aa5.7□□□□□ -1.5
SHKBP1-220ENST00000599716 RBAKDNA6NC62 111 aa5.7□□□□□ -1.5
SHKBP1-220ENST00000599716 K7EP13 123 aa5.7□□□□□ -1.5
SHKBP1-220ENST00000599716 HMGB3O15347 200 aaKnown RBP5.7□□□□□ -1.5
SHKBP1-220ENST00000599716 PLA2G1BP04054 148 aaKnown RBP5.7□□□□□ -1.5
SHKBP1-220ENST00000599716 ZNF80P51504 273 aaPredicted RBP5.7□□□□□ -1.5
SHKBP1-220ENST00000599716 FFAR4Q5NUL3 377 aa5.7□□□□□ -1.5
SHKBP1-220ENST00000599716 Q6ZSA8 131 aa5.7□□□□□ -1.5
SHKBP1-220ENST00000599716 DAZ4Q86SG3 579 aaKnown RBP5.7□□□□□ -1.5
SHKBP1-220ENST00000599716 SMIM3Q9BZL3 60 aa5.7□□□□□ -1.5
SHKBP1-220ENST00000599716 WDR61Q9GZS3 305 aaKnown RBP5.7□□□□□ -1.5
SHKBP1-220ENST00000599716 DAZ3Q9NR90 486 aaKnown RBP5.7□□□□□ -1.5
SHKBP1-220ENST00000599716 TRBV7-9A0A0J9YWB2 115 aa5.69□□□□□ -1.5
SHKBP1-220ENST00000599716 PGPA6NDG6 321 aa5.69□□□□□ -1.5
SHKBP1-220ENST00000599716 FBLL1A6NHQ2 334 aaKnown RBP5.69□□□□□ -1.5
SHKBP1-220ENST00000599716 KRTAP10-4P60372 401 aaPredicted RBP5.69□□□□□ -1.5
SHKBP1-220ENST00000599716 TDRG1Q3Y452 100 aa5.69□□□□□ -1.5
SHKBP1-220ENST00000599716 ZNF876PQ49A33 203 aa5.69□□□□□ -1.5
SHKBP1-220ENST00000599716 CFAP126Q5VTH2 177 aa5.69□□□□□ -1.5
SHKBP1-220ENST00000599716 TRAV21A0A0B4J279 112 aa5.68□□□□□ -1.5
SHKBP1-220ENST00000599716 GAGE12JA6NER3 117 aa5.68□□□□□ -1.5
SHKBP1-220ENST00000599716 PGPEP1LA6NFU8 196 aa5.68□□□□□ -1.5
SHKBP1-220ENST00000599716 RS1O15537 224 aa5.68□□□□□ -1.5
SHKBP1-220ENST00000599716 TIRAPP58753 221 aa5.68□□□□□ -1.5
SHKBP1-220ENST00000599716 GAGE1Q13065 139 aa5.68□□□□□ -1.5
SHKBP1-220ENST00000599716 GAGE4Q13068 117 aa5.68□□□□□ -1.5
SHKBP1-220ENST00000599716 GAGE5Q13069 117 aa5.68□□□□□ -1.5
SHKBP1-220ENST00000599716 GAGE13Q4V321 117 aa5.68□□□□□ -1.5
SHKBP1-220ENST00000599716 LELP1Q5T871 98 aa5.68□□□□□ -1.5
SHKBP1-220ENST00000599716 ATP6V0E2Q8NHE4 81 aa5.68□□□□□ -1.5
SHKBP1-220ENST00000599716 DEFB104AQ8WTQ1 72 aa5.68□□□□□ -1.5
SHKBP1-220ENST00000599716 ASB13Q8WXK3 278 aa5.68□□□□□ -1.5
SHKBP1-220ENST00000599716 NMES1Q9C002 83 aa5.68□□□□□ -1.5
SHKBP1-220ENST00000599716 SDF2L1Q9HCN8 221 aa5.68□□□□□ -1.5
SHKBP1-220ENST00000599716 TREM1Q9NP99 234 aa5.68□□□□□ -1.5
SHKBP1-220ENST00000599716 MBD2Q9UBB5 411 aa5.68□□□□□ -1.5
SHKBP1-220ENST00000599716 IGLV2-8P01709 118 aa5.67□□□□□ -1.5
SHKBP1-220ENST00000599716 PFN1P07737 140 aaKnown RBP5.67□□□□□ -1.5
SHKBP1-220ENST00000599716 ASIPP42127 132 aa5.67□□□□□ -1.5
SHKBP1-220ENST00000599716 RHOHQ15669 191 aa5.67□□□□□ -1.5
SHKBP1-220ENST00000599716 CNPY1Q3B7I2 92 aa5.67□□□□□ -1.5
SHKBP1-220ENST00000599716 ZNF506Q5JVG8 444 aa5.67□□□□□ -1.5
SHKBP1-220ENST00000599716 OR2T35Q8NGX2 323 aa5.67□□□□□ -1.5
SHKBP1-220ENST00000599716 CMTM2Q8TAZ6 248 aa5.67□□□□□ -1.5
SHKBP1-220ENST00000599716 PRADC1Q9BSG0 188 aa5.67□□□□□ -1.5
SHKBP1-220ENST00000599716 SAMD10Q9BYL1 202 aa5.67□□□□□ -1.5
SHKBP1-220ENST00000599716 GTSF1LQ9H1H1 148 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms