RNA–Protein interactions for RNA: ENST00000577598.5

BRIP1-202, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRIP1, Length 3,969 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-202ENST00000577598 A0A1B0GUV1 79 aa3.41□□□□□ -1.86
BRIP1-202ENST00000577598 ATOX1O00244 68 aa3.41□□□□□ -1.86
BRIP1-202ENST00000577598 SAA1P0DJI8 122 aaPredicted RBP3.41□□□□□ -1.86
BRIP1-202ENST00000577598 DEFB134Q4QY38 66 aa3.41□□□□□ -1.86
BRIP1-202ENST00000577598 FAM104AQ969W3 186 aa3.41□□□□□ -1.86
BRIP1-202ENST00000577598 TRBV6-8A0A0A6YYG3 113 aa3.41□□□□□ -1.86
BRIP1-202ENST00000577598 Q0VG73 95 aa3.41□□□□□ -1.86
BRIP1-202ENST00000577598 CSAG1Q6PB30 78 aa3.41□□□□□ -1.86
BRIP1-202ENST00000577598 LYPD5Q6UWN5 251 aa3.41□□□□□ -1.86
BRIP1-202ENST00000577598 FAM223AQ8IWN6 122 aa3.41□□□□□ -1.86
BRIP1-202ENST00000577598 CTTNBP2Q8WZ74 1663 aa3.41□□□□□ -1.86
BRIP1-202ENST00000577598 PPYP01298 95 aa3.41□□□□□ -1.86
BRIP1-202ENST00000577598 APCDD1LQ8NCL9 501 aa3.41□□□□□ -1.86
BRIP1-202ENST00000577598 C1orf147Q96MC9 270 aaPredicted RBP3.41□□□□□ -1.86
BRIP1-202ENST00000577598 FAM103A1Q9BTL3 118 aaKnown RBP3.41□□□□□ -1.86
BRIP1-202ENST00000577598 XAGE1AQ9HD64 81 aa3.41□□□□□ -1.86
BRIP1-202ENST00000577598 PLXNB3Q9ULL4 1909 aa3.41□□□□□ -1.86
BRIP1-202ENST00000577598 ABCA2Q9BZC7 2435 aa3.4□□□□□ -1.86
BRIP1-202ENST00000577598 SCAPERQ9BY12 1400 aa3.4□□□□□ -1.86
BRIP1-202ENST00000577598 TMEM141Q96I45 108 aa3.4□□□□□ -1.86
BRIP1-202ENST00000577598 Q96M85 177 aa3.4□□□□□ -1.86
BRIP1-202ENST00000577598 C20orf166-AS1Q96NR2 134 aa3.4□□□□□ -1.87
BRIP1-202ENST00000577598 GRIN2AQ12879 1464 aa3.4□□□□□ -1.87
BRIP1-202ENST00000577598 ZNF815PA8K554 130 aa3.4□□□□□ -1.87
BRIP1-202ENST00000577598 SLC48A1Q6P1K1 146 aa3.4□□□□□ -1.87
BRIP1-202ENST00000577598 SMDT1Q9H4I9 107 aa3.4□□□□□ -1.87
BRIP1-202ENST00000577598 KLK9Q9UKQ9 250 aa3.4□□□□□ -1.87
BRIP1-202ENST00000577598 ANKRD36BQ8N2N9 1353 aa3.4□□□□□ -1.87
BRIP1-202ENST00000577598 TRAV12-3A0A0B4J271 114 aa3.39□□□□□ -1.87
BRIP1-202ENST00000577598 C9orf116Q5BN46 136 aaPredicted RBP3.39□□□□□ -1.87
BRIP1-202ENST00000577598 Q8N2B8 174 aa3.39□□□□□ -1.87
BRIP1-202ENST00000577598 TOPBP1Q92547 1522 aa3.39□□□□□ -1.87
BRIP1-202ENST00000577598 NAV1Q8NEY1 1877 aa3.39□□□□□ -1.87
BRIP1-202ENST00000577598 MPV17LQ2QL34 196 aa3.39□□□□□ -1.87
BRIP1-202ENST00000577598 Q86TA4 180 aa3.39□□□□□ -1.87
BRIP1-202ENST00000577598 FAM215AQ9Y5M1 114 aa3.39□□□□□ -1.87
BRIP1-202ENST00000577598 SHROOM2Q13796 1616 aa3.39□□□□□ -1.87
BRIP1-202ENST00000577598 ABCA12Q86UK0 2595 aa3.39□□□□□ -1.87
BRIP1-202ENST00000577598 RIMBP3CA6NJZ7 1639 aa3.39□□□□□ -1.87
BRIP1-202ENST00000577598 RIMBP3BA6NNM3 1639 aa3.39□□□□□ -1.87
BRIP1-202ENST00000577598 RIMBP3Q9UFD9 1639 aa3.39□□□□□ -1.87
BRIP1-202ENST00000577598 IGLV3-16A0A075B6K0 115 aa3.39□□□□□ -1.87
BRIP1-202ENST00000577598 SPANXN1Q5VSR9 72 aa3.39□□□□□ -1.87
BRIP1-202ENST00000577598 Q8N8P6 123 aa3.39□□□□□ -1.87
BRIP1-202ENST00000577598 BPESC1Q9GZL8 116 aa3.39□□□□□ -1.87
BRIP1-202ENST00000577598 IGLC7A0M8Q6 106 aa3.38□□□□□ -1.87
BRIP1-202ENST00000577598 GYPAP02724 150 aa3.38□□□□□ -1.87
BRIP1-202ENST00000577598 KLK12Q9UKR0 248 aa3.38□□□□□ -1.87
BRIP1-202ENST00000577598 CUX1P39880 1505 aa3.38□□□□□ -1.87
BRIP1-202ENST00000577598 IGLV3-12A0A075B6K2 115 aa3.38□□□□□ -1.87
BRIP1-202ENST00000577598 C16orf90A8MZG2 172 aa3.38□□□□□ -1.87
BRIP1-202ENST00000577598 SBF1O95248 1867 aa3.38□□□□□ -1.87
BRIP1-202ENST00000577598 CXCL8P10145 99 aa3.38□□□□□ -1.87
BRIP1-202ENST00000577598 TIAM1Q13009 1591 aa3.38□□□□□ -1.87
BRIP1-202ENST00000577598 C5orf38Q86SI9 138 aa3.38□□□□□ -1.87
BRIP1-202ENST00000577598 RBBP6Q7Z6E9 1792 aaKnown RBP3.38□□□□□ -1.87
BRIP1-202ENST00000577598 LHBP01229 141 aa3.38□□□□□ -1.87
BRIP1-202ENST00000577598 EIF4EBP1Q13541 118 aaPredicted RBP3.38□□□□□ -1.87
BRIP1-202ENST00000577598 ARPINQ7Z6K5 226 aa3.38□□□□□ -1.87
BRIP1-202ENST00000577598 ADCY10Q96PN6 1610 aa3.37□□□□□ -1.87
BRIP1-202ENST00000577598 TMEM30CPA0ZSE6 113 aa3.37□□□□□ -1.87
BRIP1-202ENST00000577598 C17orf112F2Z3M2 114 aa3.37□□□□□ -1.87
BRIP1-202ENST00000577598 GAS8-AS1O95177 125 aa3.37□□□□□ -1.87
BRIP1-202ENST00000577598 ZNF791Q3KP31 576 aaPredicted RBP3.37□□□□□ -1.87
BRIP1-202ENST00000577598 POLR1AO95602 1720 aaPredicted RBP3.37□□□□□ -1.87
BRIP1-202ENST00000577598 KDM5CP41229 1560 aa3.37□□□□□ -1.87
BRIP1-202ENST00000577598 TARBP1Q13395 1621 aaKnown RBP3.37□□□□□ -1.87
BRIP1-202ENST00000577598 ARHGAP35Q9NRY4 1499 aa3.37□□□□□ -1.87
BRIP1-202ENST00000577598 A0A1W2PPM0 123 aa3.37□□□□□ -1.87
BRIP1-202ENST00000577598 UMAD1C9J7I0 102 aa3.37□□□□□ -1.87
BRIP1-202ENST00000577598 G3V3Q6 166 aa3.37□□□□□ -1.87
BRIP1-202ENST00000577598 PPP1R17O96001 155 aa3.37□□□□□ -1.87
BRIP1-202ENST00000577598 IGHV3-30-3P0DP02 117 aa3.37□□□□□ -1.87
BRIP1-202ENST00000577598 UBE2SQ16763 222 aa3.37□□□□□ -1.87
BRIP1-202ENST00000577598 MED9Q9NWA0 146 aa3.37□□□□□ -1.87
BRIP1-202ENST00000577598 COL18A1P39060 1754 aa3.37□□□□□ -1.87
BRIP1-202ENST00000577598 ADAMTS12P58397 1594 aa3.37□□□□□ -1.87
BRIP1-202ENST00000577598 LRRIQ1Q96JM4 1722 aa3.37□□□□□ -1.87
BRIP1-202ENST00000577598 YPEL1O60688 119 aa3.37□□□□□ -1.87
BRIP1-202ENST00000577598 ERC2-IT1O76042 136 aa3.37□□□□□ -1.87
BRIP1-202ENST00000577598 IGLV1-47P01700 117 aa3.37□□□□□ -1.87
BRIP1-202ENST00000577598 LCTP09848 1927 aa3.37□□□□□ -1.87
BRIP1-202ENST00000577598 PKDREJQ9NTG1 2253 aa3.37□□□□□ -1.87
BRIP1-202ENST00000577598 TCF20Q9UGU0 1960 aaKnown RBP3.37□□□□□ -1.87
BRIP1-202ENST00000577598 MYH7BA7E2Y1 1941 aa3.37□□□□□ -1.87
BRIP1-202ENST00000577598 C2orf70A6NJV1 201 aa3.36□□□□□ -1.87
BRIP1-202ENST00000577598 IGLV1-51P01701 117 aa3.36□□□□□ -1.87
BRIP1-202ENST00000577598 ZNF518AQ6AHZ1 1483 aa3.36□□□□□ -1.87
BRIP1-202ENST00000577598 PRB1P04280 392 aa3.36□□□□□ -1.87
BRIP1-202ENST00000577598 MDKP21741 143 aaPredicted RBP3.36□□□□□ -1.87
BRIP1-202ENST00000577598 LYPD1Q8N2G4 141 aa3.36□□□□□ -1.87
BRIP1-202ENST00000577598 MRPL36Q9P0J6 103 aaKnown RBP3.36□□□□□ -1.87
BRIP1-202ENST00000577598 CNOT1A5YKK6 2376 aaKnown RBP3.36□□□□□ -1.87
BRIP1-202ENST00000577598 CCL8P80075 99 aa3.36□□□□□ -1.87
BRIP1-202ENST00000577598 HIGD2AQ9BW72 106 aa3.36□□□□□ -1.87
BRIP1-202ENST00000577598 V9GYH0 126 aa3.36□□□□□ -1.87
BRIP1-202ENST00000577598 PTPRZ1P23471 2315 aaPredicted RBP3.36□□□□□ -1.87
BRIP1-202ENST00000577598 ABCC5O15440 1437 aa3.36□□□□□ -1.87
BRIP1-202ENST00000577598 OTOGLQ3ZCN5 2332 aa3.36□□□□□ -1.87
BRIP1-202ENST00000577598 RNASE3P12724 160 aaKnown RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms