RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 CBY3A6NI87 242 aa12.52□□□□□ -0.41
TUBB3-211ENST00000556536 TMEM241Q24JQ0 296 aa12.52□□□□□ -0.41
TUBB3-211ENST00000556536 LY96Q9Y6Y9 160 aa12.52□□□□□ -0.41
TUBB3-211ENST00000556536 M0R036 132 aa12.51□□□□□ -0.41
TUBB3-211ENST00000556536 GNRH2O43555 120 aa12.51□□□□□ -0.41
TUBB3-211ENST00000556536 TDRG1Q3Y452 100 aa12.51□□□□□ -0.41
TUBB3-211ENST00000556536 LINC01551Q86U37 167 aa12.51□□□□□ -0.41
TUBB3-211ENST00000556536 A0A0J9YWU9 116 aa12.5□□□□□ -0.41
TUBB3-211ENST00000556536 PLAC8L1A1L4L8 177 aa12.5□□□□□ -0.41
TUBB3-211ENST00000556536 TMEM218A2RU14 115 aa12.5□□□□□ -0.41
TUBB3-211ENST00000556536 C19orf71A6NCJ1 209 aa12.5□□□□□ -0.41
TUBB3-211ENST00000556536 KRBOX1C9JBD0 128 aa12.5□□□□□ -0.41
TUBB3-211ENST00000556536 ORM1P02763 201 aa12.5□□□□□ -0.41
TUBB3-211ENST00000556536 ZNF575Q86XF7 245 aa12.5□□□□□ -0.41
TUBB3-211ENST00000556536 RNASE8Q8TDE3 154 aaKnown RBP12.5□□□□□ -0.41
TUBB3-211ENST00000556536 NAT8Q9UHE5 227 aa12.5□□□□□ -0.41
TUBB3-211ENST00000556536 U3KQK5 164 aa12.5□□□□□ -0.41
TUBB3-211ENST00000556536 TMSB15BA0A087X1C1 80 aa12.49□□□□□ -0.41
TUBB3-211ENST00000556536 B4DEV8 164 aa12.49□□□□□ -0.41
TUBB3-211ENST00000556536 TYMSP04818 313 aa12.49□□□□□ -0.41
TUBB3-211ENST00000556536 ADCYAP1P18509 176 aa12.49□□□□□ -0.41
TUBB3-211ENST00000556536 EMP1P54849 157 aa12.49□□□□□ -0.41
TUBB3-211ENST00000556536 RPL23P62829 140 aaKnown RBP12.49□□□□□ -0.41
TUBB3-211ENST00000556536 RPL19P84098 196 aaKnown RBP12.49□□□□□ -0.41
TUBB3-211ENST00000556536 LINC01559Q495D7 138 aa12.49□□□□□ -0.41
TUBB3-211ENST00000556536 C11orf72Q8NBR9 251 aa12.49□□□□□ -0.41
TUBB3-211ENST00000556536 TMEM263Q8WUH6 116 aaKnown RBP12.49□□□□□ -0.41
TUBB3-211ENST00000556536 C16orf74Q96GX8 76 aa12.49□□□□□ -0.41
TUBB3-211ENST00000556536 KCNS1Q96KK3 526 aa12.49□□□□□ -0.41
TUBB3-211ENST00000556536 RNASE7Q9H1E1 156 aaKnown RBP12.49□□□□□ -0.41
TUBB3-211ENST00000556536 SDF2L1Q9HCN8 221 aa12.49□□□□□ -0.41
TUBB3-211ENST00000556536 MDFICQ9P1T7 246 aa12.49□□□□□ -0.41
TUBB3-211ENST00000556536 ZNF493Q6ZR52 646 aa12.48□□□□□ -0.41
TUBB3-211ENST00000556536 NUDT10Q8NFP7 164 aa12.48□□□□□ -0.41
TUBB3-211ENST00000556536 DAZAP1Q96EP5 407 aaKnown RBP12.48□□□□□ -0.41
TUBB3-211ENST00000556536 NUDT11Q96G61 164 aa12.48□□□□□ -0.41
TUBB3-211ENST00000556536 C11orf68Q9H3H3 251 aaKnown RBP12.48□□□□□ -0.41
TUBB3-211ENST00000556536 BIN3Q9NQY0 253 aa12.48□□□□□ -0.41
TUBB3-211ENST00000556536 GSN-AS1Q9NRJ2 163 aa12.48□□□□□ -0.41
TUBB3-211ENST00000556536 TRGV11A0A075B6L2 103 aa12.47□□□□□ -0.41
TUBB3-211ENST00000556536 IGHV3-16A0A0C4DH30 117 aa12.47□□□□□ -0.41
TUBB3-211ENST00000556536 GRIFINA4D1Z8 144 aa12.47□□□□□ -0.41
TUBB3-211ENST00000556536 ADIRFQ15847 76 aa12.47□□□□□ -0.41
TUBB3-211ENST00000556536 SLC7A5P1Q8MH63 180 aa12.47□□□□□ -0.41
TUBB3-211ENST00000556536 TMEM189A5PLL7 270 aa12.46□□□□□ -0.41
TUBB3-211ENST00000556536 F8W036 122 aa12.46□□□□□ -0.41
TUBB3-211ENST00000556536 P01737 135 aa12.46□□□□□ -0.41
TUBB3-211ENST00000556536 IL17DQ8TAD2 202 aa12.46□□□□□ -0.41
TUBB3-211ENST00000556536 ISOC2Q96AB3 205 aa12.46□□□□□ -0.41
TUBB3-211ENST00000556536 ZNF415Q09FC8 603 aa12.45□□□□□ -0.42
TUBB3-211ENST00000556536 IBA57Q5T440 356 aaKnown RBP12.45□□□□□ -0.42
TUBB3-211ENST00000556536 FAM231DQ6ZW35 169 aa12.45□□□□□ -0.42
TUBB3-211ENST00000556536 OR2D3Q8NGH3 330 aa12.45□□□□□ -0.42
TUBB3-211ENST00000556536 NOP10Q9NPE3 64 aaKnown RBP12.45□□□□□ -0.42
TUBB3-211ENST00000556536 CELA1Q9UNI1 258 aa12.45□□□□□ -0.42
TUBB3-211ENST00000556536 STAB2Q8WWQ8 2551 aa12.44□□□□□ -0.42
TUBB3-211ENST00000556536 RYR2Q92736 4967 aa12.44□□□□□ -0.42
TUBB3-211ENST00000556536 EPPK1P58107 5090 aaKnown RBP12.44□□□□□ -0.42
TUBB3-211ENST00000556536 TCL1AP56279 114 aa12.44□□□□□ -0.42
TUBB3-211ENST00000556536 ERVFC1-1P60608 527 aa12.44□□□□□ -0.42
TUBB3-211ENST00000556536 EDA2RQ9HAV5 297 aa12.44□□□□□ -0.42
TUBB3-211ENST00000556536 SNURFLB1AK76 121 aa12.43□□□□□ -0.42
TUBB3-211ENST00000556536 GZMBP10144 247 aa12.43□□□□□ -0.42
TUBB3-211ENST00000556536 RNASE3P12724 160 aaKnown RBP12.43□□□□□ -0.42
TUBB3-211ENST00000556536 ASIPP42127 132 aa12.43□□□□□ -0.42
TUBB3-211ENST00000556536 FAM222AQ5U5X8 452 aa12.43□□□□□ -0.42
TUBB3-211ENST00000556536 SEC11CQ9BY50 192 aa12.43□□□□□ -0.42
TUBB3-211ENST00000556536 RPP21Q9H633 154 aaKnown RBP12.43□□□□□ -0.42
TUBB3-211ENST00000556536 DKK2Q9UBU2 259 aa12.43□□□□□ -0.42
TUBB3-211ENST00000556536 TIMM8BQ9Y5J9 83 aaPredicted RBP12.43□□□□□ -0.42
TUBB3-211ENST00000556536 GATCO43716 136 aaKnown RBP12.42□□□□□ -0.42
TUBB3-211ENST00000556536 S100A4P26447 101 aaKnown RBP12.42□□□□□ -0.42
TUBB3-211ENST00000556536 DAZ2Q13117 558 aaKnown RBP12.42□□□□□ -0.42
TUBB3-211ENST00000556536 DNLZQ5SXM8 178 aa12.42□□□□□ -0.42
TUBB3-211ENST00000556536 C10orf91Q5T1B1 145 aa12.42□□□□□ -0.42
TUBB3-211ENST00000556536 SFRP2Q96HF1 295 aa12.42□□□□□ -0.42
TUBB3-211ENST00000556536 C9orf85Q96MD7 179 aa12.42□□□□□ -0.42
TUBB3-211ENST00000556536 OSTCQ9NRP0 149 aa12.42□□□□□ -0.42
TUBB3-211ENST00000556536 BIRC6Q9NR09 4857 aa12.42□□□□□ -0.42
TUBB3-211ENST00000556536 H3BVH4 76 aa12.41□□□□□ -0.42
TUBB3-211ENST00000556536 ARMS2P0C7Q2 107 aa12.41□□□□□ -0.42
TUBB3-211ENST00000556536 SPART-AS1P0CW21 52 aa12.41□□□□□ -0.42
TUBB3-211ENST00000556536 CXorf65A6NEN9 183 aa12.4□□□□□ -0.42
TUBB3-211ENST00000556536 LYRM9A8MSI8 78 aa12.4□□□□□ -0.42
TUBB3-211ENST00000556536 SPINK4O60575 86 aa12.4□□□□□ -0.42
TUBB3-211ENST00000556536 CXCL1P09341 107 aa12.4□□□□□ -0.42
TUBB3-211ENST00000556536 RPS20P60866 119 aaKnown RBP12.4□□□□□ -0.42
TUBB3-211ENST00000556536 PNRC1Q12796 327 aaPredicted RBP12.4□□□□□ -0.42
TUBB3-211ENST00000556536 NDUFA5Q16718 116 aa12.4□□□□□ -0.42
TUBB3-211ENST00000556536 Q6ZTI0 123 aa12.4□□□□□ -0.42
TUBB3-211ENST00000556536 OR10G8Q8NGN5 311 aa12.4□□□□□ -0.42
TUBB3-211ENST00000556536 SPXQ9BT56 116 aa12.4□□□□□ -0.42
TUBB3-211ENST00000556536 MRPL16Q9NX20 251 aaKnown RBP12.4□□□□□ -0.42
TUBB3-211ENST00000556536 C3orf84H3BNL1 204 aa12.39□□□□□ -0.43
TUBB3-211ENST00000556536 NANOS2P60321 138 aaKnown RBP12.39□□□□□ -0.43
TUBB3-211ENST00000556536 C15orf54Q8N8G6 183 aa12.39□□□□□ -0.43
TUBB3-211ENST00000556536 SCRT2Q9NQ03 307 aa12.39□□□□□ -0.43
TUBB3-211ENST00000556536 IL36BQ9NZH7 164 aa12.39□□□□□ -0.43
TUBB3-211ENST00000556536 CARHSP1Q9Y2V2 147 aaKnown RBP12.39□□□□□ -0.43
TUBB3-211ENST00000556536 V9GYV3 84 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms