RNA–Protein interactions for RNA: ENST00000553128.5

VPS29-211, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 449 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-211ENST00000553128 NBEAP1P0C6P0 100 aa8.29□□□□□ -1.08
VPS29-211ENST00000553128 SMIM18P0DKX4 95 aa8.29□□□□□ -1.08
VPS29-211ENST00000553128 MIR17HGQ75NE6 70 aa8.29□□□□□ -1.08
VPS29-211ENST00000553128 KRTAP9-2Q9BYQ4 174 aa8.29□□□□□ -1.08
VPS29-211ENST00000553128 UQCC1Q9NVA1 299 aa8.29□□□□□ -1.08
VPS29-211ENST00000553128 FLVCR2Q9UPI3 526 aa8.29□□□□□ -1.08
VPS29-211ENST00000553128 GAGE12JA6NER3 117 aa8.28□□□□□ -1.08
VPS29-211ENST00000553128 OR10J4P0C629 311 aa8.28□□□□□ -1.08
VPS29-211ENST00000553128 LINC00694P0DN24 101 aa8.28□□□□□ -1.08
VPS29-211ENST00000553128 BAXQ07812 192 aa8.28□□□□□ -1.08
VPS29-211ENST00000553128 GAGE1Q13065 139 aa8.28□□□□□ -1.08
VPS29-211ENST00000553128 GAGE4Q13068 117 aa8.28□□□□□ -1.08
VPS29-211ENST00000553128 GAGE5Q13069 117 aa8.28□□□□□ -1.08
VPS29-211ENST00000553128 GAGE13Q4V321 117 aa8.28□□□□□ -1.08
VPS29-211ENST00000553128 DYNC2LI1Q8TCX1 351 aa8.28□□□□□ -1.08
VPS29-211ENST00000553128 FXYD5Q96DB9 178 aa8.28□□□□□ -1.08
VPS29-211ENST00000553128 KLK12Q9UKR0 248 aa8.28□□□□□ -1.08
VPS29-211ENST00000553128 TRAV8-1A0A0A6YYK1 113 aa8.27□□□□□ -1.09
VPS29-211ENST00000553128 RBAKDNA6NC62 111 aa8.27□□□□□ -1.09
VPS29-211ENST00000553128 FAM24AA6NFZ4 105 aa8.27□□□□□ -1.09
VPS29-211ENST00000553128 ZNF876PQ49A33 203 aa8.27□□□□□ -1.09
VPS29-211ENST00000553128 RMI2Q96E14 147 aa8.27□□□□□ -1.09
VPS29-211ENST00000553128 C20orf85Q9H1P6 137 aa8.27□□□□□ -1.09
VPS29-211ENST00000553128 F6UZH7 168 aa8.26□□□□□ -1.09
VPS29-211ENST00000553128 FGF7P21781 194 aa8.26□□□□□ -1.09
VPS29-211ENST00000553128 BCAP31P51572 246 aa8.26□□□□□ -1.09
VPS29-211ENST00000553128 AP3S2P59780 193 aa8.26□□□□□ -1.09
VPS29-211ENST00000553128 RANP62826 216 aaKnown RBP8.26□□□□□ -1.09
VPS29-211ENST00000553128 PYDC2Q56P42 97 aa8.26□□□□□ -1.09
VPS29-211ENST00000553128 UBE2WQ96B02 151 aa8.26□□□□□ -1.09
VPS29-211ENST00000553128 OR51M1Q9H341 326 aa8.26□□□□□ -1.09
VPS29-211ENST00000553128 C11orf1Q9H5F2 150 aa8.26□□□□□ -1.09
VPS29-211ENST00000553128 DIRC3C9JPN6 131 aa8.25□□□□□ -1.09
VPS29-211ENST00000553128 L7N2F9 121 aa8.25□□□□□ -1.09
VPS29-211ENST00000553128 CCSO14618 274 aa8.25□□□□□ -1.09
VPS29-211ENST00000553128 INPP1P49441 399 aa8.25□□□□□ -1.09
VPS29-211ENST00000553128 VAMP2P63027 116 aa8.25□□□□□ -1.09
VPS29-211ENST00000553128 NIT1Q86X76 327 aa8.25□□□□□ -1.09
VPS29-211ENST00000553128 CHAC2Q8WUX2 184 aa8.25□□□□□ -1.09
VPS29-211ENST00000553128 TVP23CQ96ET8 276 aa8.25□□□□□ -1.09
VPS29-211ENST00000553128 SAMD10Q9BYL1 202 aa8.25□□□□□ -1.09
VPS29-211ENST00000553128 SLIRPQ9GZT3 109 aaKnown RBP8.25□□□□□ -1.09
VPS29-211ENST00000553128 LSM5Q9Y4Y9 91 aaKnown RBP8.25□□□□□ -1.09
VPS29-211ENST00000553128 PGPEP1LA6NFU8 196 aa8.24□□□□□ -1.09
VPS29-211ENST00000553128 MGST1P10620 155 aaKnown RBP8.24□□□□□ -1.09
VPS29-211ENST00000553128 CSN1S1P47710 185 aa8.24□□□□□ -1.09
VPS29-211ENST00000553128 ZNF506Q5JVG8 444 aa8.24□□□□□ -1.09
VPS29-211ENST00000553128 ATRAIDQ6UW56 229 aa8.24□□□□□ -1.09
VPS29-211ENST00000553128 CYB561D1Q8N8Q1 229 aa8.24□□□□□ -1.09
VPS29-211ENST00000553128 SDF2L1Q9HCN8 221 aa8.24□□□□□ -1.09
VPS29-211ENST00000553128 C11orf21Q9P2W6 132 aa8.24□□□□□ -1.09
VPS29-211ENST00000553128 LENEPQ9Y5L5 61 aa8.24□□□□□ -1.09
VPS29-211ENST00000553128 V9GYH0 126 aa8.24□□□□□ -1.09
VPS29-211ENST00000553128 TRAV21A0A0B4J279 112 aa8.23□□□□□ -1.09
VPS29-211ENST00000553128 IGSF23A1L1A6 192 aa8.23□□□□□ -1.09
VPS29-211ENST00000553128 PRSS1P07477 247 aa8.23□□□□□ -1.09
VPS29-211ENST00000553128 ASB13Q8WXK3 278 aa8.23□□□□□ -1.09
VPS29-211ENST00000553128 NPCDR1Q9BY65 106 aa8.23□□□□□ -1.09
VPS29-211ENST00000553128 USP17L23D6RBM5 183 aa8.22□□□□□ -1.09
VPS29-211ENST00000553128 CIDEAO60543 219 aa8.22□□□□□ -1.09
VPS29-211ENST00000553128 NDUFB6O95139 128 aa8.22□□□□□ -1.09
VPS29-211ENST00000553128 C9orf163Q8N9P6 203 aa8.22□□□□□ -1.09
VPS29-211ENST00000553128 OR2T35Q8NGX2 323 aa8.22□□□□□ -1.09
VPS29-211ENST00000553128 C2orf50Q96LR7 162 aa8.22□□□□□ -1.09
VPS29-211ENST00000553128 HYLS1Q96M11 299 aa8.22□□□□□ -1.09
VPS29-211ENST00000553128 C9orf85Q96MD7 179 aa8.22□□□□□ -1.09
VPS29-211ENST00000553128 LINC01600Q96MT4 127 aa8.22□□□□□ -1.09
VPS29-211ENST00000553128 URGCP-MRPS24S4R325 110 aa8.22□□□□□ -1.09
VPS29-211ENST00000553128 A0A0D9SG52 128 aa8.21□□□□□ -1.1
VPS29-211ENST00000553128 S100A11P31949 105 aa8.21□□□□□ -1.1
VPS29-211ENST00000553128 SULT1A1P50225 295 aa8.21□□□□□ -1.1
VPS29-211ENST00000553128 C14orf177Q52M58 125 aa8.21□□□□□ -1.1
VPS29-211ENST00000553128 ENHOQ6UWT2 76 aa8.21□□□□□ -1.1
VPS29-211ENST00000553128 SDIM1Q6ZPB5 146 aa8.21□□□□□ -1.1
VPS29-211ENST00000553128 C14orf178Q8N769 122 aaPredicted RBP8.21□□□□□ -1.1
VPS29-211ENST00000553128 TMEM75Q8N9X5 138 aa8.21□□□□□ -1.1
VPS29-211ENST00000553128 TMED6Q8WW62 240 aa8.21□□□□□ -1.1
VPS29-211ENST00000553128 ATP5SQ99766 215 aa8.21□□□□□ -1.1
VPS29-211ENST00000553128 BCL7BQ9BQE9 202 aa8.21□□□□□ -1.1
VPS29-211ENST00000553128 FAT4Q6V0I7 4981 aa8.21□□□□□ -1.1
VPS29-211ENST00000553128 A0A087WWC5 75 aa8.2□□□□□ -1.1
VPS29-211ENST00000553128 OR7C2O60412 319 aa8.2□□□□□ -1.1
VPS29-211ENST00000553128 EIF3GO75821 320 aaKnown RBP eCLIP8.2□□□□□ -1.1
VPS29-211ENST00000553128 ZNF80P51504 273 aaPredicted RBP8.2□□□□□ -1.1
VPS29-211ENST00000553128 TMEM252Q8N6L7 170 aa8.2□□□□□ -1.1
VPS29-211ENST00000553128 THAP6Q8TBB0 222 aa8.2□□□□□ -1.1
VPS29-211ENST00000553128 MITD1Q8WV92 249 aa8.2□□□□□ -1.1
VPS29-211ENST00000553128 KCNS1Q96KK3 526 aa8.2□□□□□ -1.1
VPS29-211ENST00000553128 LINC00479Q96M42 142 aa8.2□□□□□ -1.1
VPS29-211ENST00000553128 PARLQ9H300 379 aa8.2□□□□□ -1.1
VPS29-211ENST00000553128 JPT2Q9H910 190 aa8.2□□□□□ -1.1
VPS29-211ENST00000553128 FAM25EA8MYX2 175 aa8.19□□□□□ -1.1
VPS29-211ENST00000553128 RNASE3P12724 160 aaKnown RBP8.19□□□□□ -1.1
VPS29-211ENST00000553128 SPANXN2Q5MJ10 180 aa8.19□□□□□ -1.1
VPS29-211ENST00000553128 FFAR4Q5NUL3 377 aa8.19□□□□□ -1.1
VPS29-211ENST00000553128 GOLT1AQ6ZVE7 132 aa8.19□□□□□ -1.1
VPS29-211ENST00000553128 DEDD2Q8WXF8 326 aa8.19□□□□□ -1.1
VPS29-211ENST00000553128 SGK494Q96LW2 274 aa8.19□□□□□ -1.1
VPS29-211ENST00000553128 C1orf43Q9BWL3 253 aa8.19□□□□□ -1.1
VPS29-211ENST00000553128 SH3BGRL3Q9H299 93 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 144.5 ms