RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 CBY3A6NI87 242 aa16.97■□□□□ 0.31
TMEM260-202ENST00000538838 AZU1P20160 251 aa16.97■□□□□ 0.31
TMEM260-202ENST00000538838 RPL19P84098 196 aaKnown RBP16.97■□□□□ 0.31
TMEM260-202ENST00000538838 ISOC2Q96AB3 205 aa16.97■□□□□ 0.31
TMEM260-202ENST00000538838 DAZAP1Q96EP5 407 aaKnown RBP16.97■□□□□ 0.31
TMEM260-202ENST00000538838 DNAH9Q9NYC9 4486 aa16.97■□□□□ 0.31
TMEM260-202ENST00000538838 RRN3P1Q2M238 152 aa16.96■□□□□ 0.31
TMEM260-202ENST00000538838 TDRG1Q3Y452 100 aa16.96■□□□□ 0.31
TMEM260-202ENST00000538838 NEU1Q99519 415 aa16.96■□□□□ 0.31
TMEM260-202ENST00000538838 LINC00467Q9BRT7 94 aa16.96■□□□□ 0.31
TMEM260-202ENST00000538838 ZMAT4Q9H898 229 aa16.96■□□□□ 0.31
TMEM260-202ENST00000538838 TMSB15BA0A087X1C1 80 aa16.96■□□□□ 0.3
TMEM260-202ENST00000538838 B4DEV8 164 aa16.96■□□□□ 0.3
TMEM260-202ENST00000538838 LINC01559Q495D7 138 aa16.96■□□□□ 0.3
TMEM260-202ENST00000538838 NUDT10Q8NFP7 164 aa16.96■□□□□ 0.3
TMEM260-202ENST00000538838 NUDT11Q96G61 164 aa16.96■□□□□ 0.3
TMEM260-202ENST00000538838 P01737 135 aa16.95■□□□□ 0.3
TMEM260-202ENST00000538838 TYMSP04818 313 aa16.95■□□□□ 0.3
TMEM260-202ENST00000538838 C10orf91Q5T1B1 145 aa16.95■□□□□ 0.3
TMEM260-202ENST00000538838 IBA57Q5T440 356 aaKnown RBP16.95■□□□□ 0.3
TMEM260-202ENST00000538838 KRBOX1C9JBD0 128 aa16.94■□□□□ 0.3
TMEM260-202ENST00000538838 GNRH2O43555 120 aa16.94■□□□□ 0.3
TMEM260-202ENST00000538838 ERVFC1-1P60608 527 aa16.94■□□□□ 0.3
TMEM260-202ENST00000538838 KCNS1Q96KK3 526 aa16.94■□□□□ 0.3
TMEM260-202ENST00000538838 IGHV4-28A0A0C4DH34 117 aa16.93■□□□□ 0.3
TMEM260-202ENST00000538838 SMIM9A6NGZ8 99 aa16.93■□□□□ 0.3
TMEM260-202ENST00000538838 PNRC1Q12796 327 aaPredicted RBP16.93■□□□□ 0.3
TMEM260-202ENST00000538838 FAM231DQ6ZW35 169 aa16.93■□□□□ 0.3
TMEM260-202ENST00000538838 Q8NAQ8 132 aa16.93■□□□□ 0.3
TMEM260-202ENST00000538838 CARHSP1Q9Y2V2 147 aaKnown RBP16.93■□□□□ 0.3
TMEM260-202ENST00000538838 TMEM189A5PLL7 270 aa16.92■□□□□ 0.3
TMEM260-202ENST00000538838 MIFP14174 115 aa16.92■□□□□ 0.3
TMEM260-202ENST00000538838 OR2D3Q8NGH3 330 aa16.92■□□□□ 0.3
TMEM260-202ENST00000538838 RNASE8Q8TDE3 154 aaKnown RBP16.92■□□□□ 0.3
TMEM260-202ENST00000538838 HUWE1Q7Z6Z7 4374 aaKnown RBP16.92■□□□□ 0.3
TMEM260-202ENST00000538838 GRIFINA4D1Z8 144 aa16.92■□□□□ 0.3
TMEM260-202ENST00000538838 DEFB4AO15263 64 aa16.92■□□□□ 0.3
TMEM260-202ENST00000538838 ZNF575Q86XF7 245 aa16.92■□□□□ 0.3
TMEM260-202ENST00000538838 TMEM263Q8WUH6 116 aaKnown RBP16.92■□□□□ 0.3
TMEM260-202ENST00000538838 SFRP2Q96HF1 295 aa16.92■□□□□ 0.3
TMEM260-202ENST00000538838 TRGV11A0A075B6L2 103 aa16.91■□□□□ 0.3
TMEM260-202ENST00000538838 C16orf74Q96GX8 76 aa16.91■□□□□ 0.3
TMEM260-202ENST00000538838 RPP21Q9H633 154 aaKnown RBP16.91■□□□□ 0.3
TMEM260-202ENST00000538838 MDFICQ9P1T7 246 aa16.91■□□□□ 0.3
TMEM260-202ENST00000538838 GATCO43716 136 aaKnown RBP16.9■□□□□ 0.3
TMEM260-202ENST00000538838 NHLRC4P0CG21 123 aaPredicted RBP16.9■□□□□ 0.3
TMEM260-202ENST00000538838 C11orf72Q8NBR9 251 aa16.9■□□□□ 0.3
TMEM260-202ENST00000538838 OSTCQ9NRP0 149 aa16.9■□□□□ 0.3
TMEM260-202ENST00000538838 IGHV3-16A0A0C4DH30 117 aa16.89■□□□□ 0.29
TMEM260-202ENST00000538838 PLAC8L1A1L4L8 177 aa16.89■□□□□ 0.29
TMEM260-202ENST00000538838 GZMBP10144 247 aa16.88■□□□□ 0.29
TMEM260-202ENST00000538838 EMP1P54849 157 aa16.88■□□□□ 0.29
TMEM260-202ENST00000538838 C15orf54Q8N8G6 183 aa16.88■□□□□ 0.29
TMEM260-202ENST00000538838 GSN-AS1Q9NRJ2 163 aa16.88■□□□□ 0.29
TMEM260-202ENST00000538838 ASIPP42127 132 aa16.88■□□□□ 0.29
TMEM260-202ENST00000538838 ZNF415Q09FC8 603 aa16.88■□□□□ 0.29
TMEM260-202ENST00000538838 ZNF493Q6ZR52 646 aa16.88■□□□□ 0.29
TMEM260-202ENST00000538838 OR10G8Q8NGN5 311 aa16.88■□□□□ 0.29
TMEM260-202ENST00000538838 APOC3P02656 99 aa16.87■□□□□ 0.29
TMEM260-202ENST00000538838 V9GYV3 84 aa16.87■□□□□ 0.29
TMEM260-202ENST00000538838 S100A4P26447 101 aaKnown RBP16.86■□□□□ 0.29
TMEM260-202ENST00000538838 IL17DQ8TAD2 202 aa16.86■□□□□ 0.29
TMEM260-202ENST00000538838 TIMM8BQ9Y5J9 83 aaPredicted RBP16.86■□□□□ 0.29
TMEM260-202ENST00000538838 SNURFLB1AK76 121 aa16.85■□□□□ 0.29
TMEM260-202ENST00000538838 H3BVH4 76 aa16.85■□□□□ 0.29
TMEM260-202ENST00000538838 CXCL1P09341 107 aa16.85■□□□□ 0.29
TMEM260-202ENST00000538838 RNASE3P12724 160 aaKnown RBP16.85■□□□□ 0.29
TMEM260-202ENST00000538838 TCL1AP56279 114 aa16.85■□□□□ 0.29
TMEM260-202ENST00000538838 RPS20P60866 119 aaKnown RBP16.85■□□□□ 0.29
TMEM260-202ENST00000538838 RNF212Q495C1 297 aa16.85■□□□□ 0.29
TMEM260-202ENST00000538838 A0A0J9YWU9 116 aa16.85■□□□□ 0.29
TMEM260-202ENST00000538838 DNLZQ5SXM8 178 aa16.85■□□□□ 0.29
TMEM260-202ENST00000538838 C11orf68Q9H3H3 251 aaKnown RBP16.85■□□□□ 0.29
TMEM260-202ENST00000538838 XKRY2A2RUG3 117 aa16.84■□□□□ 0.29
TMEM260-202ENST00000538838 CT83Q5H943 113 aa16.84■□□□□ 0.29
TMEM260-202ENST00000538838 C9orf85Q96MD7 179 aa16.84■□□□□ 0.29
TMEM260-202ENST00000538838 ARMS2P0C7Q2 107 aa16.83■□□□□ 0.28
TMEM260-202ENST00000538838 CLRN3Q8NCR9 226 aa16.83■□□□□ 0.28
TMEM260-202ENST00000538838 NOP10Q9NPE3 64 aaKnown RBP16.83■□□□□ 0.28
TMEM260-202ENST00000538838 MUC4Q99102 2169 aa16.83■□□□□ 0.28
TMEM260-202ENST00000538838 IL36BQ9NZH7 164 aa16.82■□□□□ 0.28
TMEM260-202ENST00000538838 A8MWL6 223 aa16.81■□□□□ 0.28
TMEM260-202ENST00000538838 MT-ND4LP03901 98 aa16.81■□□□□ 0.28
TMEM260-202ENST00000538838 TPPP3Q9BW30 176 aa16.81■□□□□ 0.28
TMEM260-202ENST00000538838 CELA1Q9UNI1 258 aa16.81■□□□□ 0.28
TMEM260-202ENST00000538838 IGLC6P0CF74 106 aa16.81■□□□□ 0.28
TMEM260-202ENST00000538838 FAM222AQ5U5X8 452 aa16.81■□□□□ 0.28
TMEM260-202ENST00000538838 SVBPQ8N300 66 aa16.81■□□□□ 0.28
TMEM260-202ENST00000538838 GTSF1Q8WW33 167 aa16.81■□□□□ 0.28
TMEM260-202ENST00000538838 U3KQK5 164 aa16.81■□□□□ 0.28
TMEM260-202ENST00000538838 STAB2Q8WWQ8 2551 aa16.8■□□□□ 0.28
TMEM260-202ENST00000538838 PPP1R2P9O14990 202 aa16.8■□□□□ 0.28
TMEM260-202ENST00000538838 DAZ2Q13117 558 aaKnown RBP16.8■□□□□ 0.28
TMEM260-202ENST00000538838 FER1L6-AS1Q8NA97 138 aa16.8■□□□□ 0.28
TMEM260-202ENST00000538838 TSKUQ8WUA8 353 aa16.8■□□□□ 0.28
TMEM260-202ENST00000538838 MRPL16Q9NX20 251 aaKnown RBP16.8■□□□□ 0.28
TMEM260-202ENST00000538838 ANAPC16Q96DE5 110 aa16.79■□□□□ 0.28
TMEM260-202ENST00000538838 SPXQ9BT56 116 aa16.79■□□□□ 0.28
TMEM260-202ENST00000538838 SCRT2Q9NQ03 307 aa16.79■□□□□ 0.28
TMEM260-202ENST00000538838 DKK2Q9UBU2 259 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms