RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 SPANXA1Q9NS26 97 aa2.4□□□□□ -2.03
CSDE1-216ENST00000534389 KLRF1Q9NZS2 232 aa2.4□□□□□ -2.03
CSDE1-216ENST00000534389 PRNDQ9UKY0 176 aa2.4□□□□□ -2.03
CSDE1-216ENST00000534389 CHCHD2Q9Y6H1 151 aaPredicted RBP2.4□□□□□ -2.03
CSDE1-216ENST00000534389 CEP192Q8TEP8 1941 aa2.4□□□□□ -2.03
CSDE1-216ENST00000534389 CABIN1Q9Y6J0 2220 aa2.4□□□□□ -2.03
CSDE1-216ENST00000534389 FER1L5A0AVI2 2057 aa2.39□□□□□ -2.03
CSDE1-216ENST00000534389 TEX49A0A1B0GTD5 131 aa2.39□□□□□ -2.03
CSDE1-216ENST00000534389 OOEPA6NGQ2 149 aa2.39□□□□□ -2.03
CSDE1-216ENST00000534389 CDX4O14627 284 aaPredicted RBP2.39□□□□□ -2.03
CSDE1-216ENST00000534389 CRYGBP07316 175 aa2.39□□□□□ -2.03
CSDE1-216ENST00000534389 CRYGDP07320 174 aa2.39□□□□□ -2.03
CSDE1-216ENST00000534389 SCGB1C2P0DMR2 95 aa2.39□□□□□ -2.03
CSDE1-216ENST00000534389 CGB3P0DN86 165 aa2.39□□□□□ -2.03
CSDE1-216ENST00000534389 CGB7P0DN87 165 aa2.39□□□□□ -2.03
CSDE1-216ENST00000534389 CCL3P10147 92 aa2.39□□□□□ -2.03
CSDE1-216ENST00000534389 ZNF22P17026 224 aaPredicted RBP2.39□□□□□ -2.03
CSDE1-216ENST00000534389 HLA-DMBP28068 263 aa2.39□□□□□ -2.03
CSDE1-216ENST00000534389 UCNP55089 124 aa2.39□□□□□ -2.03
CSDE1-216ENST00000534389 ATP5IP56385 69 aaPredicted RBP2.39□□□□□ -2.03
CSDE1-216ENST00000534389 TSPEAR-AS2P59090 65 aa2.39□□□□□ -2.03
CSDE1-216ENST00000534389 ERVK-16P61578 105 aa2.39□□□□□ -2.03
CSDE1-216ENST00000534389 PRCDQ00LT1 54 aa2.39□□□□□ -2.03
CSDE1-216ENST00000534389 ZNF56Q15929 161 aa2.39□□□□□ -2.03
CSDE1-216ENST00000534389 LINC01620Q4KN68 170 aa2.39□□□□□ -2.03
CSDE1-216ENST00000534389 LCE1AQ5T7P2 110 aa2.39□□□□□ -2.03
CSDE1-216ENST00000534389 MDP1Q86V88 176 aa2.39□□□□□ -2.03
CSDE1-216ENST00000534389 CD177Q8N6Q3 437 aa2.39□□□□□ -2.03
CSDE1-216ENST00000534389 KLHL30-AS1Q8NEE0 82 aa2.39□□□□□ -2.03
CSDE1-216ENST00000534389 OR4C13Q8NGP0 309 aa2.39□□□□□ -2.03
CSDE1-216ENST00000534389 OR13C6PQ8NH95 151 aa2.39□□□□□ -2.03
CSDE1-216ENST00000534389 MYOZ3Q8TDC0 251 aa2.39□□□□□ -2.03
CSDE1-216ENST00000534389 TMEM263Q8WUH6 116 aaKnown RBP2.39□□□□□ -2.03
CSDE1-216ENST00000534389 LEAP2Q969E1 77 aa2.39□□□□□ -2.03
CSDE1-216ENST00000534389 DPH3Q96FX2 82 aa2.39□□□□□ -2.03
CSDE1-216ENST00000534389 AMELXQ99217 191 aa2.39□□□□□ -2.03
CSDE1-216ENST00000534389 FAM173AQ9BQD7 235 aa2.39□□□□□ -2.03
CSDE1-216ENST00000534389 UPK3BQ9BT76 320 aa2.39□□□□□ -2.03
CSDE1-216ENST00000534389 RTL8AQ9BWD3 113 aa2.39□□□□□ -2.03
CSDE1-216ENST00000534389 MRPL20Q9BYC9 149 aaKnown RBP2.39□□□□□ -2.03
CSDE1-216ENST00000534389 ENY2Q9NPA8 101 aa2.39□□□□□ -2.03
CSDE1-216ENST00000534389 OTORQ9NRC9 128 aa2.39□□□□□ -2.03
CSDE1-216ENST00000534389 SEC16AO15027 2179 aa2.39□□□□□ -2.03
CSDE1-216ENST00000534389 BRWD1Q9NSI6 2320 aa2.39□□□□□ -2.03
CSDE1-216ENST00000534389 IGLV3-12A0A075B6K2 115 aa2.38□□□□□ -2.03
CSDE1-216ENST00000534389 IGHV4-61A0A0C4DH41 118 aa2.38□□□□□ -2.03
CSDE1-216ENST00000534389 A0A0J9YY99 117 aa2.38□□□□□ -2.03
CSDE1-216ENST00000534389 TRBV10-2A0A0K0K1G8 114 aa2.38□□□□□ -2.03
CSDE1-216ENST00000534389 hADV29S1A0JD25 119 aa2.38□□□□□ -2.03
CSDE1-216ENST00000534389 LY6LH3BQJ8 138 aa2.38□□□□□ -2.03
CSDE1-216ENST00000534389 K7ENP7 123 aa2.38□□□□□ -2.03
CSDE1-216ENST00000534389 UQCRQO14949 82 aa2.38□□□□□ -2.03
CSDE1-216ENST00000534389 CXCL13O43927 109 aa2.38□□□□□ -2.03
CSDE1-216ENST00000534389 SH2D1AO60880 128 aa2.38□□□□□ -2.03
CSDE1-216ENST00000534389 ZFAND5O76080 213 aa2.38□□□□□ -2.03
CSDE1-216ENST00000534389 TSHBP01222 138 aa2.38□□□□□ -2.03
CSDE1-216ENST00000534389 IGHV3-30P01768 117 aa2.38□□□□□ -2.03
CSDE1-216ENST00000534389 IGHV4-59P01825 116 aa2.38□□□□□ -2.03
CSDE1-216ENST00000534389 IGHV4-34P06331 123 aa2.38□□□□□ -2.03
CSDE1-216ENST00000534389 P0DMU3 169 aa2.38□□□□□ -2.03
CSDE1-216ENST00000534389 FAM231AP0DMU4 169 aa2.38□□□□□ -2.03
CSDE1-216ENST00000534389 FAM231CP0DMU5 169 aa2.38□□□□□ -2.03
CSDE1-216ENST00000534389 IGHV3-30-5P0DP03 117 aa2.38□□□□□ -2.03
CSDE1-216ENST00000534389 CKS2P33552 79 aa2.38□□□□□ -2.03
CSDE1-216ENST00000534389 ZNF80P51504 273 aaPredicted RBP2.38□□□□□ -2.03
CSDE1-216ENST00000534389 CCL11P51671 97 aa2.38□□□□□ -2.03
CSDE1-216ENST00000534389 PMVKQ15126 192 aa2.38□□□□□ -2.03
CSDE1-216ENST00000534389 C17orf58Q2M2W7 97 aa2.38□□□□□ -2.03
CSDE1-216ENST00000534389 MRGPRG-AS1Q2M3A8 158 aa2.38□□□□□ -2.03
CSDE1-216ENST00000534389 C10orf55Q5SWW7 151 aa2.38□□□□□ -2.03
CSDE1-216ENST00000534389 PVRIGQ6DKI7 326 aa2.38□□□□□ -2.03
CSDE1-216ENST00000534389 LINC00305Q7Z4B0 112 aa2.38□□□□□ -2.03
CSDE1-216ENST00000534389 C5orf38Q86SI9 138 aa2.38□□□□□ -2.03
CSDE1-216ENST00000534389 TDHQ8IZJ6 230 aa2.38□□□□□ -2.03
CSDE1-216ENST00000534389 ZCCHC24Q8N2G6 241 aaKnown RBP2.38□□□□□ -2.03
CSDE1-216ENST00000534389 C10orf126Q8N4M7 172 aa2.38□□□□□ -2.03
CSDE1-216ENST00000534389 S1PR3Q99500 378 aa2.38□□□□□ -2.03
CSDE1-216ENST00000534389 SLC25A39Q9BZJ4 359 aaPredicted RBP2.38□□□□□ -2.03
CSDE1-216ENST00000534389 ARRDC1-AS1Q9H2J1 176 aa2.38□□□□□ -2.03
CSDE1-216ENST00000534389 NDUFA4L2Q9NRX3 87 aa2.38□□□□□ -2.03
CSDE1-216ENST00000534389 RNF186Q9NXI6 227 aa2.38□□□□□ -2.03
CSDE1-216ENST00000534389 ZNRD1Q9P1U0 126 aa2.38□□□□□ -2.03
CSDE1-216ENST00000534389 RPUSD1Q9UJJ7 312 aaKnown RBP2.38□□□□□ -2.03
CSDE1-216ENST00000534389 MYO7AQ13402 2215 aa2.38□□□□□ -2.03
CSDE1-216ENST00000534389 ZNF815PA8K554 130 aa2.37□□□□□ -2.03
CSDE1-216ENST00000534389 KRTAP29-1A8MX34 341 aaPredicted RBP2.37□□□□□ -2.03
CSDE1-216ENST00000534389 F8VRH5 84 aa2.37□□□□□ -2.03
CSDE1-216ENST00000534389 H3BMM0 161 aa2.37□□□□□ -2.03
CSDE1-216ENST00000534389 H7C1H1 209 aa2.37□□□□□ -2.03
CSDE1-216ENST00000534389 H7C423 109 aa2.37□□□□□ -2.03
CSDE1-216ENST00000534389 OVOL1O14753 267 aa2.37□□□□□ -2.03
CSDE1-216ENST00000534389 CRYGAP11844 174 aa2.37□□□□□ -2.03
CSDE1-216ENST00000534389 COX7CP15954 63 aa2.37□□□□□ -2.03
CSDE1-216ENST00000534389 EMP1P54849 157 aa2.37□□□□□ -2.03
CSDE1-216ENST00000534389 HIST1H4AP62805 103 aaKnown RBP2.37□□□□□ -2.03
CSDE1-216ENST00000534389 PLGLB1Q02325 96 aa2.37□□□□□ -2.03
CSDE1-216ENST00000534389 WT1-ASQ06250 92 aa2.37□□□□□ -2.03
CSDE1-216ENST00000534389 ERCC8Q13216 396 aa2.37□□□□□ -2.03
CSDE1-216ENST00000534389 HES1Q14469 280 aa2.37□□□□□ -2.03
CSDE1-216ENST00000534389 NSUN5P1Q3KNT7 163 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms