RNA–Protein interactions for RNA: ENST00000533628.5

RPUSD4-208, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene RPUSD4, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-208ENST00000533628 A0A1W2PPV4 95 aa9.4□□□□□ -0.9
RPUSD4-208ENST00000533628 FRMD6-AS1P0C7T7 363 aa9.4□□□□□ -0.9
RPUSD4-208ENST00000533628 PYYP10082 97 aa9.4□□□□□ -0.9
RPUSD4-208ENST00000533628 PMCHL1Q16048 86 aa9.4□□□□□ -0.9
RPUSD4-208ENST00000533628 PSG3Q16557 428 aa9.4□□□□□ -0.9
RPUSD4-208ENST00000533628 SAMD13Q5VXD3 122 aa9.4□□□□□ -0.9
RPUSD4-208ENST00000533628 HIST1H1EP10412 219 aaKnown RBP9.4□□□□□ -0.91
RPUSD4-208ENST00000533628 TAS2R45P59539 299 aa9.4□□□□□ -0.91
RPUSD4-208ENST00000533628 PSMG4Q5JS54 123 aa9.4□□□□□ -0.91
RPUSD4-208ENST00000533628 IGFL4Q6B9Z1 124 aa9.4□□□□□ -0.91
RPUSD4-208ENST00000533628 FXYD5Q96DB9 178 aa9.4□□□□□ -0.91
RPUSD4-208ENST00000533628 C16orf92Q96LL3 132 aa9.4□□□□□ -0.91
RPUSD4-208ENST00000533628 ZNF331Q9NQX6 463 aaPredicted RBP9.4□□□□□ -0.91
RPUSD4-208ENST00000533628 H3BTX0 84 aa9.39□□□□□ -0.91
RPUSD4-208ENST00000533628 SLC17A3O00476 420 aa9.39□□□□□ -0.91
RPUSD4-208ENST00000533628 NDUFB4O95168 129 aa9.39□□□□□ -0.91
RPUSD4-208ENST00000533628 ID1P41134 155 aa9.39□□□□□ -0.91
RPUSD4-208ENST00000533628 SNRPD3P62318 126 aaKnown RBP9.39□□□□□ -0.91
RPUSD4-208ENST00000533628 KCNS1Q96KK3 526 aa9.39□□□□□ -0.91
RPUSD4-208ENST00000533628 MRPL18Q9H0U6 180 aaKnown RBP9.39□□□□□ -0.91
RPUSD4-208ENST00000533628 TRBV19A0A075B6N1 114 aa9.38□□□□□ -0.91
RPUSD4-208ENST00000533628 A0A1B0GV72 72 aa9.38□□□□□ -0.91
RPUSD4-208ENST00000533628 HLA-DMBP28068 263 aa9.38□□□□□ -0.91
RPUSD4-208ENST00000533628 PAXXQ9BUH6 204 aa9.38□□□□□ -0.91
RPUSD4-208ENST00000533628 DNAH9Q9NYC9 4486 aa9.38□□□□□ -0.91
RPUSD4-208ENST00000533628 KNCNA6PVL3 124 aa9.38□□□□□ -0.91
RPUSD4-208ENST00000533628 F2Z2F3 143 aa9.38□□□□□ -0.91
RPUSD4-208ENST00000533628 OR7C2O60412 319 aa9.38□□□□□ -0.91
RPUSD4-208ENST00000533628 DEFB1P60022 68 aa9.38□□□□□ -0.91
RPUSD4-208ENST00000533628 OR10J3Q5JRS4 329 aa9.38□□□□□ -0.91
RPUSD4-208ENST00000533628 RNF182Q8N6D2 247 aa9.38□□□□□ -0.91
RPUSD4-208ENST00000533628 B9D2Q9BPU9 175 aa9.38□□□□□ -0.91
RPUSD4-208ENST00000533628 TRAV9-2A0A087WT02 112 aa9.37□□□□□ -0.91
RPUSD4-208ENST00000533628 LOC102724200A0A096LPH7 203 aaPredicted RBP9.37□□□□□ -0.91
RPUSD4-208ENST00000533628 CTXND1A0A1B0GTU2 59 aa9.37□□□□□ -0.91
RPUSD4-208ENST00000533628 C3orf79P0CE67 100 aa9.37□□□□□ -0.91
RPUSD4-208ENST00000533628 STAG3L2P0CL84 134 aa9.37□□□□□ -0.91
RPUSD4-208ENST00000533628 STAG3L3P0CL85 134 aa9.37□□□□□ -0.91
RPUSD4-208ENST00000533628 AMTP48728 403 aa9.37□□□□□ -0.91
RPUSD4-208ENST00000533628 WDR73Q6P4I2 378 aa9.37□□□□□ -0.91
RPUSD4-208ENST00000533628 SBSPONQ8IVN8 264 aa9.37□□□□□ -0.91
RPUSD4-208ENST00000533628 SFRP2Q96HF1 295 aa9.37□□□□□ -0.91
RPUSD4-208ENST00000533628 SLC50A1Q9BRV3 221 aa9.37□□□□□ -0.91
RPUSD4-208ENST00000533628 HMGB3O15347 200 aaKnown RBP9.36□□□□□ -0.91
RPUSD4-208ENST00000533628 OR10J4P0C629 311 aa9.36□□□□□ -0.91
RPUSD4-208ENST00000533628 GDF5OSQ5U4N7 250 aa9.36□□□□□ -0.91
RPUSD4-208ENST00000533628 AMMECR1LQ6DCA0 310 aa9.36□□□□□ -0.91
RPUSD4-208ENST00000533628 PQLC2Q6ZP29 291 aa9.36□□□□□ -0.91
RPUSD4-208ENST00000533628 TRPT1Q86TN4 253 aaKnown RBP9.36□□□□□ -0.91
RPUSD4-208ENST00000533628 ZNF324O75467 553 aaPredicted RBP9.36□□□□□ -0.91
RPUSD4-208ENST00000533628 PDE6HQ13956 83 aa9.36□□□□□ -0.91
RPUSD4-208ENST00000533628 FER1L6-AS1Q8NA97 138 aa9.36□□□□□ -0.91
RPUSD4-208ENST00000533628 H3BMM0 161 aa9.35□□□□□ -0.91
RPUSD4-208ENST00000533628 FOXI2Q6ZQN5 318 aa9.35□□□□□ -0.91
RPUSD4-208ENST00000533628 AGRNO00468 2067 aa9.35□□□□□ -0.91
RPUSD4-208ENST00000533628 A0A0J9YX75 114 aa9.35□□□□□ -0.91
RPUSD4-208ENST00000533628 A8MTW9 85 aa9.35□□□□□ -0.91
RPUSD4-208ENST00000533628 F6UB75 175 aa9.35□□□□□ -0.91
RPUSD4-208ENST00000533628 PDE6DO43924 150 aa9.35□□□□□ -0.91
RPUSD4-208ENST00000533628 CXorf1O96002 111 aa9.35□□□□□ -0.91
RPUSD4-208ENST00000533628 ARL14EPLP0DKL9 152 aa9.35□□□□□ -0.91
RPUSD4-208ENST00000533628 HLA-DRB4P13762 266 aa9.35□□□□□ -0.91
RPUSD4-208ENST00000533628 UBE2L3P68036 154 aaKnown RBP9.35□□□□□ -0.91
RPUSD4-208ENST00000533628 PSG9Q00887 426 aa9.35□□□□□ -0.91
RPUSD4-208ENST00000533628 BLNKQ8WV28 456 aa9.35□□□□□ -0.91
RPUSD4-208ENST00000533628 ASCL2Q99929 193 aa9.35□□□□□ -0.91
RPUSD4-208ENST00000533628 HLA-DRB4X5D2U9 266 aa9.35□□□□□ -0.91
RPUSD4-208ENST00000533628 RPL35AP18077 110 aaKnown RBP9.34□□□□□ -0.91
RPUSD4-208ENST00000533628 BVES-AS1Q5T3Y7 98 aa9.34□□□□□ -0.91
RPUSD4-208ENST00000533628 ERASQ7Z444 233 aa9.34□□□□□ -0.91
RPUSD4-208ENST00000533628 CLEC5AQ9NY25 188 aa9.34□□□□□ -0.91
RPUSD4-208ENST00000533628 MT-ND6P03923 174 aa9.33□□□□□ -0.92
RPUSD4-208ENST00000533628 GIG44P09565 113 aaPredicted RBP9.33□□□□□ -0.92
RPUSD4-208ENST00000533628 GCHFRP30047 84 aa9.33□□□□□ -0.92
RPUSD4-208ENST00000533628 MPV17L2Q567V2 206 aa9.33□□□□□ -0.92
RPUSD4-208ENST00000533628 STHQ8IWL8 128 aa9.33□□□□□ -0.92
RPUSD4-208ENST00000533628 EXOC3-AS1Q8N2X6 119 aa9.33□□□□□ -0.92
RPUSD4-208ENST00000533628 KIR2DL5BQ8NHK3 375 aa9.33□□□□□ -0.92
RPUSD4-208ENST00000533628 GNB1LQ9BYB4 327 aa9.33□□□□□ -0.92
RPUSD4-208ENST00000533628 C11orf94C9JXX5 98 aa9.33□□□□□ -0.92
RPUSD4-208ENST00000533628 PRAC2D3DTV9 90 aa9.33□□□□□ -0.92
RPUSD4-208ENST00000533628 PMCHP20382 165 aa9.33□□□□□ -0.92
RPUSD4-208ENST00000533628 UFSP1Q6NVU6 142 aa9.33□□□□□ -0.92
RPUSD4-208ENST00000533628 MRPL53Q96EL3 112 aaKnown RBP9.33□□□□□ -0.92
RPUSD4-208ENST00000533628 TM2D3Q9BRN9 247 aa9.33□□□□□ -0.92
RPUSD4-208ENST00000533628 TMEM167BQ9NRX6 74 aa9.33□□□□□ -0.92
RPUSD4-208ENST00000533628 IL36BQ9NZH7 164 aa9.33□□□□□ -0.92
RPUSD4-208ENST00000533628 M0R3E3 92 aa9.32□□□□□ -0.92
RPUSD4-208ENST00000533628 PAGE4O60829 102 aa9.32□□□□□ -0.92
RPUSD4-208ENST00000533628 PRB4P10163 310 aaPredicted RBP9.32□□□□□ -0.92
RPUSD4-208ENST00000533628 LYPD1Q8N2G4 141 aa9.32□□□□□ -0.92
RPUSD4-208ENST00000533628 OR10G8Q8NGN5 311 aa9.32□□□□□ -0.92
RPUSD4-208ENST00000533628 BORCS7Q96B45 105 aa9.32□□□□□ -0.92
RPUSD4-208ENST00000533628 HUWE1Q7Z6Z7 4374 aaKnown RBP9.32□□□□□ -0.92
RPUSD4-208ENST00000533628 SNURFLB1AK76 121 aa9.32□□□□□ -0.92
RPUSD4-208ENST00000533628 SMIM17P0DL12 118 aa9.32□□□□□ -0.92
RPUSD4-208ENST00000533628 AMTNQ6UX39 209 aa9.32□□□□□ -0.92
RPUSD4-208ENST00000533628 NEGR1Q7Z3B1 354 aa9.32□□□□□ -0.92
RPUSD4-208ENST00000533628 C5orf17Q8NAS9 161 aa9.32□□□□□ -0.92
RPUSD4-208ENST00000533628 OR8A1Q8NGG7 326 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms