RNA–Protein interactions for RNA: ENST00000524556.1

CSTF3-204, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3

Gene CSTF3, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-204ENST00000524556 C2orf50Q96LR7 162 aa9.72□□□□□ -0.85
CSTF3-204ENST00000524556 PLA2G2DQ9UNK4 145 aa9.72□□□□□ -0.85
CSTF3-204ENST00000524556 DIRC3C9JPN6 131 aa9.71□□□□□ -0.86
CSTF3-204ENST00000524556 S100A10P60903 97 aa9.71□□□□□ -0.86
CSTF3-204ENST00000524556 SCXQ7RTU7 201 aa9.71□□□□□ -0.86
CSTF3-204ENST00000524556 SDHCQ99643 169 aaPredicted RBP9.71□□□□□ -0.86
CSTF3-204ENST00000524556 FBLL1A6NHQ2 334 aaKnown RBP9.7□□□□□ -0.86
CSTF3-204ENST00000524556 LECT2O14960 151 aa9.7□□□□□ -0.86
CSTF3-204ENST00000524556 IL15RAQ13261 267 aa9.7□□□□□ -0.86
CSTF3-204ENST00000524556 THAP6Q8TBB0 222 aa9.7□□□□□ -0.86
CSTF3-204ENST00000524556 TMED6Q8WW62 240 aa9.7□□□□□ -0.86
CSTF3-204ENST00000524556 PRADC1Q9BSG0 188 aa9.7□□□□□ -0.86
CSTF3-204ENST00000524556 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.69□□□□□ -0.86
CSTF3-204ENST00000524556 TYMSP04818 313 aa9.69□□□□□ -0.86
CSTF3-204ENST00000524556 RAB32Q13637 225 aa9.69□□□□□ -0.86
CSTF3-204ENST00000524556 RHOHQ15669 191 aa9.69□□□□□ -0.86
CSTF3-204ENST00000524556 GTSF1LQ9H1H1 148 aa9.69□□□□□ -0.86
CSTF3-204ENST00000524556 TRAV8-3A0A0A6YYJ7 113 aa9.68□□□□□ -0.86
CSTF3-204ENST00000524556 TRBV6-4A0A1B0GX49 114 aa9.68□□□□□ -0.86
CSTF3-204ENST00000524556 OR7C2O60412 319 aa9.68□□□□□ -0.86
CSTF3-204ENST00000524556 CIDEAO60543 219 aa9.68□□□□□ -0.86
CSTF3-204ENST00000524556 LINC01620Q4KN68 170 aa9.68□□□□□ -0.86
CSTF3-204ENST00000524556 Q8N3U1 123 aa9.68□□□□□ -0.86
CSTF3-204ENST00000524556 SEC22CQ9BRL7 303 aa9.68□□□□□ -0.86
CSTF3-204ENST00000524556 TRAV21A0A0B4J279 112 aa9.67□□□□□ -0.86
CSTF3-204ENST00000524556 RS1O15537 224 aa9.67□□□□□ -0.86
CSTF3-204ENST00000524556 NHLH2Q02577 135 aa9.67□□□□□ -0.86
CSTF3-204ENST00000524556 ASAH1Q13510 395 aa9.67□□□□□ -0.86
CSTF3-204ENST00000524556 CFAP126Q5VTH2 177 aa9.67□□□□□ -0.86
CSTF3-204ENST00000524556 ATP6V0E2Q8NHE4 81 aa9.67□□□□□ -0.86
CSTF3-204ENST00000524556 ATP5SQ99766 215 aa9.67□□□□□ -0.86
CSTF3-204ENST00000524556 CHAC1Q9BUX1 264 aa9.67□□□□□ -0.86
CSTF3-204ENST00000524556 SDF2L1Q9HCN8 221 aa9.67□□□□□ -0.86
CSTF3-204ENST00000524556 IGHV3-73A0A0B4J1V6 119 aa9.66□□□□□ -0.86
CSTF3-204ENST00000524556 CCDC160A6NGH7 325 aa9.66□□□□□ -0.86
CSTF3-204ENST00000524556 IL7P13232 177 aa9.66□□□□□ -0.86
CSTF3-204ENST00000524556 UBE2L3P68036 154 aaKnown RBP9.66□□□□□ -0.86
CSTF3-204ENST00000524556 ZNF876PQ49A33 203 aa9.66□□□□□ -0.86
CSTF3-204ENST00000524556 DPPA3Q6W0C5 159 aa9.66□□□□□ -0.86
CSTF3-204ENST00000524556 OR5C1Q8NGR4 320 aa9.66□□□□□ -0.86
CSTF3-204ENST00000524556 BAALCQ8WXS3 180 aa9.66□□□□□ -0.86
CSTF3-204ENST00000524556 KCNS1Q96KK3 526 aa9.66□□□□□ -0.86
CSTF3-204ENST00000524556 KCNIP2Q9NS61 270 aa9.66□□□□□ -0.86
CSTF3-204ENST00000524556 TRAV6A0A075B6T7 132 aa9.65□□□□□ -0.86
CSTF3-204ENST00000524556 PLA2G10O15496 165 aa9.65□□□□□ -0.86
CSTF3-204ENST00000524556 TCRBP04435 133 aa9.65□□□□□ -0.86
CSTF3-204ENST00000524556 TOR2AQ5JU69 321 aa9.65□□□□□ -0.86
CSTF3-204ENST00000524556 CIRBP-AS1Q8TBR5 109 aa9.65□□□□□ -0.86
CSTF3-204ENST00000524556 ASB13Q8WXK3 278 aa9.65□□□□□ -0.86
CSTF3-204ENST00000524556 TVP23CQ96ET8 276 aa9.65□□□□□ -0.86
CSTF3-204ENST00000524556 HYLS1Q96M11 299 aa9.65□□□□□ -0.86
CSTF3-204ENST00000524556 WDR61Q9GZS3 305 aaKnown RBP9.65□□□□□ -0.86
CSTF3-204ENST00000524556 RBFOX3A6NFN3 312 aa9.64□□□□□ -0.87
CSTF3-204ENST00000524556 F6UZH7 168 aa9.64□□□□□ -0.87
CSTF3-204ENST00000524556 DAZ4Q86SG3 579 aaKnown RBP9.64□□□□□ -0.87
CSTF3-204ENST00000524556 Q8N976 141 aa9.64□□□□□ -0.87
CSTF3-204ENST00000524556 DAZ3Q9NR90 486 aaKnown RBP9.64□□□□□ -0.87
CSTF3-204ENST00000524556 OTORQ9NRC9 128 aa9.64□□□□□ -0.87
CSTF3-204ENST00000524556 COX11Q9Y6N1 276 aa9.64□□□□□ -0.87
CSTF3-204ENST00000524556 RNF222A6NCQ9 220 aa9.63□□□□□ -0.87
CSTF3-204ENST00000524556 PGPA6NDG6 321 aa9.63□□□□□ -0.87
CSTF3-204ENST00000524556 GGTLC3B5MD39 225 aa9.63□□□□□ -0.87
CSTF3-204ENST00000524556 LYRM1O43325 122 aa9.63□□□□□ -0.87
CSTF3-204ENST00000524556 MGST1P10620 155 aaKnown RBP9.63□□□□□ -0.87
CSTF3-204ENST00000524556 CMTM2Q8TAZ6 248 aa9.63□□□□□ -0.87
CSTF3-204ENST00000524556 NMES1Q9C002 83 aa9.63□□□□□ -0.87
CSTF3-204ENST00000524556 SH3BGRL3Q9H299 93 aa9.63□□□□□ -0.87
CSTF3-204ENST00000524556 TREM1Q9NP99 234 aa9.63□□□□□ -0.87
CSTF3-204ENST00000524556 RPH3ALQ9UNE2 315 aa9.63□□□□□ -0.87
CSTF3-204ENST00000524556 C17orf112F2Z3M2 114 aa9.62□□□□□ -0.87
CSTF3-204ENST00000524556 IGLV2-8P01709 118 aa9.62□□□□□ -0.87
CSTF3-204ENST00000524556 ACOT6Q3I5F7 207 aaPredicted RBP9.62□□□□□ -0.87
CSTF3-204ENST00000524556 KHDC3LQ587J8 217 aa9.62□□□□□ -0.87
CSTF3-204ENST00000524556 GOLT1AQ6ZVE7 132 aa9.62□□□□□ -0.87
CSTF3-204ENST00000524556 PTH2Q96A98 100 aa9.62□□□□□ -0.87
CSTF3-204ENST00000524556 RBM38Q9H0Z9 239 aaKnown RBP9.62□□□□□ -0.87
CSTF3-204ENST00000524556 NUDT15Q9NV35 164 aa9.62□□□□□ -0.87
CSTF3-204ENST00000524556 TRAV8-1A0A0A6YYK1 113 aa9.61□□□□□ -0.87
CSTF3-204ENST00000524556 TAS2R45P59539 299 aa9.61□□□□□ -0.87
CSTF3-204ENST00000524556 FAM74A1Q5RGS3 127 aa9.61□□□□□ -0.87
CSTF3-204ENST00000524556 ARL6IP6Q8N6S5 226 aa9.61□□□□□ -0.87
CSTF3-204ENST00000524556 RMI2Q96E14 147 aa9.61□□□□□ -0.87
CSTF3-204ENST00000524556 C9orf85Q96MD7 179 aa9.61□□□□□ -0.87
CSTF3-204ENST00000524556 C11orf21Q9P2W6 132 aa9.61□□□□□ -0.87
CSTF3-204ENST00000524556 MBD2Q9UBB5 411 aa9.61□□□□□ -0.87
CSTF3-204ENST00000524556 PGPEP1LA6NFU8 196 aa9.6□□□□□ -0.87
CSTF3-204ENST00000524556 H2AFB2P0C5Z0 115 aa9.6□□□□□ -0.87
CSTF3-204ENST00000524556 LINC00694P0DN24 101 aa9.6□□□□□ -0.87
CSTF3-204ENST00000524556 ZNF506Q5JVG8 444 aa9.6□□□□□ -0.87
CSTF3-204ENST00000524556 FFAR4Q5NUL3 377 aa9.6□□□□□ -0.87
CSTF3-204ENST00000524556 GAGE12JA6NER3 117 aa9.59□□□□□ -0.87
CSTF3-204ENST00000524556 ZNF80P51504 273 aaPredicted RBP9.59□□□□□ -0.87
CSTF3-204ENST00000524556 GAGE1Q13065 139 aa9.59□□□□□ -0.87
CSTF3-204ENST00000524556 GAGE4Q13068 117 aa9.59□□□□□ -0.87
CSTF3-204ENST00000524556 GAGE5Q13069 117 aa9.59□□□□□ -0.87
CSTF3-204ENST00000524556 GAGE13Q4V321 117 aa9.59□□□□□ -0.87
CSTF3-204ENST00000524556 DNAJC30Q96LL9 226 aa9.59□□□□□ -0.87
CSTF3-204ENST00000524556 OR5AC2Q9NZP5 309 aa9.59□□□□□ -0.87
CSTF3-204ENST00000524556 IGKV2D-24A0A075B6R9 120 aa9.58□□□□□ -0.88
CSTF3-204ENST00000524556 A0A087WWC5 75 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms