RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 EMP1P54849 157 aa6.66□□□□□ -1.34
HDAC3-215ENST00000519474 SPINK13Q1W4C9 94 aa6.66□□□□□ -1.34
HDAC3-215ENST00000519474 ERASQ7Z444 233 aa6.66□□□□□ -1.34
HDAC3-215ENST00000519474 PSMG3Q9BT73 122 aaPredicted RBP6.66□□□□□ -1.34
HDAC3-215ENST00000519474 SLC39A9Q9NUM3 307 aa6.66□□□□□ -1.34
HDAC3-215ENST00000519474 OR5AC2Q9NZP5 309 aa6.66□□□□□ -1.34
HDAC3-215ENST00000519474 PLECQ15149 4684 aaKnown RBP6.66□□□□□ -1.34
HDAC3-215ENST00000519474 IGHV4-4A0A075B6R2 117 aa6.65□□□□□ -1.34
HDAC3-215ENST00000519474 TRAV12-2A0A075B6T6 113 aa6.65□□□□□ -1.34
HDAC3-215ENST00000519474 LOC102723971A0A1B0GUV8 181 aa6.65□□□□□ -1.34
HDAC3-215ENST00000519474 E5RGE8 158 aa6.65□□□□□ -1.34
HDAC3-215ENST00000519474 HBE1P02100 147 aa6.65□□□□□ -1.34
HDAC3-215ENST00000519474 IGLC2P0DOY2 106 aa6.65□□□□□ -1.34
HDAC3-215ENST00000519474 ESDP10768 282 aa6.65□□□□□ -1.34
HDAC3-215ENST00000519474 CXCL2P19875 107 aa6.65□□□□□ -1.34
HDAC3-215ENST00000519474 H2BFSP57053 126 aa6.65□□□□□ -1.34
HDAC3-215ENST00000519474 RHOBP62745 196 aa6.65□□□□□ -1.34
HDAC3-215ENST00000519474 HBG1P69891 147 aa6.65□□□□□ -1.34
HDAC3-215ENST00000519474 HBG2P69892 147 aa6.65□□□□□ -1.34
HDAC3-215ENST00000519474 CYCSP99999 105 aaKnown RBP6.65□□□□□ -1.34
HDAC3-215ENST00000519474 HIST1H1AQ02539 215 aaPredicted RBP6.65□□□□□ -1.34
HDAC3-215ENST00000519474 RRN3P1Q2M238 152 aa6.65□□□□□ -1.34
HDAC3-215ENST00000519474 KHDC3LQ587J8 217 aa6.65□□□□□ -1.34
HDAC3-215ENST00000519474 FAM222AQ5U5X8 452 aa6.65□□□□□ -1.34
HDAC3-215ENST00000519474 SMIM20Q8N5G0 67 aa6.65□□□□□ -1.34
HDAC3-215ENST00000519474 OR11H4Q8NGC9 324 aa6.65□□□□□ -1.34
HDAC3-215ENST00000519474 OR1L4Q8NGR5 311 aa6.65□□□□□ -1.34
HDAC3-215ENST00000519474 LYSTQ99698 3801 aa6.65□□□□□ -1.34
HDAC3-215ENST00000519474 ZNF586Q9NXT0 402 aa6.65□□□□□ -1.34
HDAC3-215ENST00000519474 YTHDF2Q9Y5A9 579 aaKnown RBP6.65□□□□□ -1.34
HDAC3-215ENST00000519474 HIST1H1EP10412 219 aaKnown RBP6.64□□□□□ -1.35
HDAC3-215ENST00000519474 CLINT1Q14677 625 aa6.64□□□□□ -1.35
HDAC3-215ENST00000519474 KIR3DS1Q14943 382 aa6.64□□□□□ -1.35
HDAC3-215ENST00000519474 LRRC37A5PQ49AS3 106 aa6.64□□□□□ -1.35
HDAC3-215ENST00000519474 LCN15Q6UWW0 184 aa6.64□□□□□ -1.35
HDAC3-215ENST00000519474 FA2HQ7L5A8 372 aa6.64□□□□□ -1.35
HDAC3-215ENST00000519474 OR5C1Q8NGR4 320 aa6.64□□□□□ -1.35
HDAC3-215ENST00000519474 SLC50A1Q9BRV3 221 aa6.64□□□□□ -1.35
HDAC3-215ENST00000519474 NIPSNAP3BQ9BS92 247 aa6.64□□□□□ -1.35
HDAC3-215ENST00000519474 SLC25A31Q9H0C2 315 aa6.64□□□□□ -1.35
HDAC3-215ENST00000519474 PXMP4Q9Y6I8 212 aa6.64□□□□□ -1.35
HDAC3-215ENST00000519474 UBE2L5PA0A1B0GUS4 154 aa6.63□□□□□ -1.35
HDAC3-215ENST00000519474 PLAC8L1A1L4L8 177 aa6.63□□□□□ -1.35
HDAC3-215ENST00000519474 NDUFB4O95168 129 aa6.63□□□□□ -1.35
HDAC3-215ENST00000519474 PPP1R1CQ8WVI7 109 aa6.63□□□□□ -1.35
HDAC3-215ENST00000519474 LINC01587Q99440 93 aa6.63□□□□□ -1.35
HDAC3-215ENST00000519474 SS18L2Q9UHA2 77 aa6.63□□□□□ -1.35
HDAC3-215ENST00000519474 TRBV19A0A075B6N1 114 aa6.62□□□□□ -1.35
HDAC3-215ENST00000519474 MPDU1O75352 247 aa6.62□□□□□ -1.35
HDAC3-215ENST00000519474 GIPP09681 153 aaPredicted RBP6.62□□□□□ -1.35
HDAC3-215ENST00000519474 CT45A10P0DMU9 189 aa6.62□□□□□ -1.35
HDAC3-215ENST00000519474 PMCHP20382 165 aa6.62□□□□□ -1.35
HDAC3-215ENST00000519474 TSPOP30536 169 aa6.62□□□□□ -1.35
HDAC3-215ENST00000519474 FAM167A-AS1Q96KT0 104 aa6.62□□□□□ -1.35
HDAC3-215ENST00000519474 NPCDR1Q9BY65 106 aa6.62□□□□□ -1.35
HDAC3-215ENST00000519474 WDR61Q9GZS3 305 aaKnown RBP6.62□□□□□ -1.35
HDAC3-215ENST00000519474 TMEM126AQ9H061 195 aa6.62□□□□□ -1.35
HDAC3-215ENST00000519474 MRPL16Q9NX20 251 aaKnown RBP6.62□□□□□ -1.35
HDAC3-215ENST00000519474 TMEM14CQ9P0S9 112 aa6.62□□□□□ -1.35
HDAC3-215ENST00000519474 VAX2Q9UIW0 290 aa6.62□□□□□ -1.35
HDAC3-215ENST00000519474 TEX48A0A1B0GUV7 120 aa6.61□□□□□ -1.35
HDAC3-215ENST00000519474 F5H768 121 aa6.61□□□□□ -1.35
HDAC3-215ENST00000519474 G3V3Q6 166 aa6.61□□□□□ -1.35
HDAC3-215ENST00000519474 ZNF253O75346 499 aa6.61□□□□□ -1.35
HDAC3-215ENST00000519474 INSP01308 110 aa6.61□□□□□ -1.35
HDAC3-215ENST00000519474 PYYP10082 97 aa6.61□□□□□ -1.35
HDAC3-215ENST00000519474 HTN1P15515 57 aa6.61□□□□□ -1.35
HDAC3-215ENST00000519474 NDUFA6P56556 154 aa6.61□□□□□ -1.35
HDAC3-215ENST00000519474 DAD1P61803 113 aa6.61□□□□□ -1.35
HDAC3-215ENST00000519474 COA6Q5JTJ3 125 aaKnown RBP6.61□□□□□ -1.35
HDAC3-215ENST00000519474 OR10J6PQ8NGY7 276 aa6.61□□□□□ -1.35
HDAC3-215ENST00000519474 SLC25A2Q9BXI2 301 aa6.61□□□□□ -1.35
HDAC3-215ENST00000519474 HSPB8Q9UJY1 196 aa6.61□□□□□ -1.35
HDAC3-215ENST00000519474 ERG28Q9UKR5 140 aa6.61□□□□□ -1.35
HDAC3-215ENST00000519474 BORCS7-ASMTA0A0B4J1R7 106 aa6.6□□□□□ -1.35
HDAC3-215ENST00000519474 LYRM9A8MSI8 78 aa6.6□□□□□ -1.35
HDAC3-215ENST00000519474 NPIPB6E9PJ23 425 aa6.6□□□□□ -1.35
HDAC3-215ENST00000519474 M0R3E3 92 aa6.6□□□□□ -1.35
HDAC3-215ENST00000519474 ERCC8Q13216 396 aa6.6□□□□□ -1.35
HDAC3-215ENST00000519474 TMEM78Q5T7P6 136 aa6.6□□□□□ -1.35
HDAC3-215ENST00000519474 MIR17HGQ75NE6 70 aa6.6□□□□□ -1.35
HDAC3-215ENST00000519474 TMEM256Q8N2U0 113 aa6.6□□□□□ -1.35
HDAC3-215ENST00000519474 EXOC3-AS1Q8N2X6 119 aa6.6□□□□□ -1.35
HDAC3-215ENST00000519474 POM121L12Q8N7R1 296 aa6.6□□□□□ -1.35
HDAC3-215ENST00000519474 INO80EQ8NBZ0 244 aaPredicted RBP6.6□□□□□ -1.35
HDAC3-215ENST00000519474 RNF141Q8WVD5 230 aa6.6□□□□□ -1.35
HDAC3-215ENST00000519474 AGPAT4-IT1Q9H0P7 198 aa6.6□□□□□ -1.35
HDAC3-215ENST00000519474 SPANXB1Q9NS25 103 aaPredicted RBP6.6□□□□□ -1.35
HDAC3-215ENST00000519474 A0A0U1RRA0 63 aa6.59□□□□□ -1.35
HDAC3-215ENST00000519474 H7BYZ3 331 aa6.59□□□□□ -1.35
HDAC3-215ENST00000519474 DEFB130BP0DP73 79 aa6.59□□□□□ -1.35
HDAC3-215ENST00000519474 DEFB130AP0DP74 79 aa6.59□□□□□ -1.35
HDAC3-215ENST00000519474 HTN3P15516 51 aa6.59□□□□□ -1.35
HDAC3-215ENST00000519474 RPL12P30050 165 aaKnown RBP6.59□□□□□ -1.35
HDAC3-215ENST00000519474 BLNKQ8WV28 456 aa6.59□□□□□ -1.35
HDAC3-215ENST00000519474 MRPL53Q96EL3 112 aaKnown RBP6.59□□□□□ -1.35
HDAC3-215ENST00000519474 ZNF503Q96F45 646 aa6.59□□□□□ -1.35
HDAC3-215ENST00000519474 DNAJC30Q96LL9 226 aa6.59□□□□□ -1.35
HDAC3-215ENST00000519474 FAM19A4Q96LR4 140 aa6.59□□□□□ -1.35
HDAC3-215ENST00000519474 LINC00477Q96M19 166 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms