RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 HBDP02042 147 aa3.49□□□□□ -1.85
HMGB3P13-201ENST00000511263 SYNJ2BPP57105 145 aa3.49□□□□□ -1.85
HMGB3P13-201ENST00000511263 RSPO1Q2MKA7 263 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P13-201ENST00000511263 DEFB134Q4QY38 66 aa3.49□□□□□ -1.85
HMGB3P13-201ENST00000511263 TMEM155Q4W5P6 130 aa3.49□□□□□ -1.85
HMGB3P13-201ENST00000511263 CENPWQ5EE01 88 aa3.49□□□□□ -1.85
HMGB3P13-201ENST00000511263 DEFB121Q5J5C9 76 aa3.49□□□□□ -1.85
HMGB3P13-201ENST00000511263 FAM104BQ5XKR9 115 aa3.49□□□□□ -1.85
HMGB3P13-201ENST00000511263 GUSBP11Q6P575 273 aa3.49□□□□□ -1.85
HMGB3P13-201ENST00000511263 LINC00305Q7Z4B0 112 aa3.49□□□□□ -1.85
HMGB3P13-201ENST00000511263 MARCH3Q86UD3 253 aa3.49□□□□□ -1.85
HMGB3P13-201ENST00000511263 KRTAP7-1Q8IUC3 87 aa3.49□□□□□ -1.85
HMGB3P13-201ENST00000511263 PRSS33Q8NF86 280 aa3.49□□□□□ -1.85
HMGB3P13-201ENST00000511263 FMC1Q96HJ9 113 aa3.49□□□□□ -1.85
HMGB3P13-201ENST00000511263 C2orf48Q96LS8 159 aa3.49□□□□□ -1.85
HMGB3P13-201ENST00000511263 IGF2BP2-AS1Q96M15 143 aa3.49□□□□□ -1.85
HMGB3P13-201ENST00000511263 PAXXQ9BUH6 204 aa3.49□□□□□ -1.85
HMGB3P13-201ENST00000511263 AICDAQ9GZX7 198 aa3.49□□□□□ -1.85
HMGB3P13-201ENST00000511263 DPH3P1Q9H4G8 78 aa3.49□□□□□ -1.85
HMGB3P13-201ENST00000511263 DAZ1Q9NQZ3 744 aaKnown RBP3.49□□□□□ -1.85
HMGB3P13-201ENST00000511263 OTORQ9NRC9 128 aa3.49□□□□□ -1.85
HMGB3P13-201ENST00000511263 TECTAO75443 2155 aa3.49□□□□□ -1.85
HMGB3P13-201ENST00000511263 TRBV7-3A0A075B6L6 115 aa3.48□□□□□ -1.85
HMGB3P13-201ENST00000511263 A0A1B0GTH9 108 aa3.48□□□□□ -1.85
HMGB3P13-201ENST00000511263 A0A1B0GWA3 101 aa3.48□□□□□ -1.85
HMGB3P13-201ENST00000511263 LYRM9A8MSI8 78 aa3.48□□□□□ -1.85
HMGB3P13-201ENST00000511263 NDUFB3O43676 98 aa3.48□□□□□ -1.85
HMGB3P13-201ENST00000511263 NDUFC1O43677 76 aa3.48□□□□□ -1.85
HMGB3P13-201ENST00000511263 OXTP01178 125 aa3.48□□□□□ -1.85
HMGB3P13-201ENST00000511263 IGKV1D-33P01593 117 aa3.48□□□□□ -1.85
HMGB3P13-201ENST00000511263 IGKV1-33P01594 117 aa3.48□□□□□ -1.85
HMGB3P13-201ENST00000511263 LGALS3P17931 250 aaKnown RBP3.48□□□□□ -1.85
HMGB3P13-201ENST00000511263 UBE2D1P51668 147 aa3.48□□□□□ -1.85
HMGB3P13-201ENST00000511263 CACNG7P62955 275 aa3.48□□□□□ -1.85
HMGB3P13-201ENST00000511263 SP6Q3SY56 376 aa3.48□□□□□ -1.85
HMGB3P13-201ENST00000511263 KIAA2026Q5HYC2 2103 aa3.48□□□□□ -1.85
HMGB3P13-201ENST00000511263 C5orf38Q86SI9 138 aa3.48□□□□□ -1.85
HMGB3P13-201ENST00000511263 PCP2Q8IVA1 136 aa3.48□□□□□ -1.85
HMGB3P13-201ENST00000511263 LINC01561Q8N1V8 128 aa3.48□□□□□ -1.85
HMGB3P13-201ENST00000511263 WFDC11Q8NEX6 87 aa3.48□□□□□ -1.85
HMGB3P13-201ENST00000511263 PFN4Q8NHR9 129 aa3.48□□□□□ -1.85
HMGB3P13-201ENST00000511263 RFESDQ8TAC1 157 aa3.48□□□□□ -1.85
HMGB3P13-201ENST00000511263 CNRIP1Q96F85 164 aaPredicted RBP3.48□□□□□ -1.85
HMGB3P13-201ENST00000511263 ARHGAP5-AS1Q96IT6 56 aa3.48□□□□□ -1.85
HMGB3P13-201ENST00000511263 WFDC6Q9BQY6 131 aa3.48□□□□□ -1.85
HMGB3P13-201ENST00000511263 NPCDR1Q9BY65 106 aa3.48□□□□□ -1.85
HMGB3P13-201ENST00000511263 CALYQ9NYX4 217 aa3.48□□□□□ -1.85
HMGB3P13-201ENST00000511263 IGKV3D-11A0A0A0MRZ8 115 aa3.47□□□□□ -1.85
HMGB3P13-201ENST00000511263 IGHV1-58A0A0C4DH39 117 aa3.47□□□□□ -1.85
HMGB3P13-201ENST00000511263 C19orf71A6NCJ1 209 aa3.47□□□□□ -1.85
HMGB3P13-201ENST00000511263 UPK2O00526 184 aa3.47□□□□□ -1.85
HMGB3P13-201ENST00000511263 SPINK4O60575 86 aa3.47□□□□□ -1.85
HMGB3P13-201ENST00000511263 BCE1O60756 84 aa3.47□□□□□ -1.85
HMGB3P13-201ENST00000511263 TCRAP04437 139 aa3.47□□□□□ -1.85
HMGB3P13-201ENST00000511263 PLNP26678 52 aa3.47□□□□□ -1.85
HMGB3P13-201ENST00000511263 FCER1GP30273 86 aa3.47□□□□□ -1.85
HMGB3P13-201ENST00000511263 EFNA4P52798 201 aa3.47□□□□□ -1.85
HMGB3P13-201ENST00000511263 ZNF816Q0VGE8 651 aaPredicted RBP3.47□□□□□ -1.85
HMGB3P13-201ENST00000511263 LPAL2Q16609 132 aa3.47□□□□□ -1.85
HMGB3P13-201ENST00000511263 SCGB1D4Q6XE38 83 aa3.47□□□□□ -1.85
HMGB3P13-201ENST00000511263 LINC00173Q6ZV60 143 aa3.47□□□□□ -1.85
HMGB3P13-201ENST00000511263 OR8A1Q8NGG7 326 aa3.47□□□□□ -1.85
HMGB3P13-201ENST00000511263 C10orf105Q8TEF2 133 aa3.47□□□□□ -1.85
HMGB3P13-201ENST00000511263 EEF1AKMT3Q96AZ1 226 aa3.47□□□□□ -1.85
HMGB3P13-201ENST00000511263 VSIG2Q96IQ7 327 aa3.47□□□□□ -1.85
HMGB3P13-201ENST00000511263 TMEM243Q9BU79 118 aa3.47□□□□□ -1.85
HMGB3P13-201ENST00000511263 HHLA3Q9XRX5 114 aa3.47□□□□□ -1.85
HMGB3P13-201ENST00000511263 ABCA7Q8IZY2 2146 aa3.47□□□□□ -1.85
HMGB3P13-201ENST00000511263 TMSB15BA0A087X1C1 80 aa3.46□□□□□ -1.86
HMGB3P13-201ENST00000511263 A0A1W2PQD3 144 aa3.46□□□□□ -1.86
HMGB3P13-201ENST00000511263 LINC01549A6NIU2 74 aa3.46□□□□□ -1.86
HMGB3P13-201ENST00000511263 PEX7O00628 323 aa3.46□□□□□ -1.86
HMGB3P13-201ENST00000511263 NDUFS5O43920 106 aa3.46□□□□□ -1.86
HMGB3P13-201ENST00000511263 LYPD3O95274 346 aa3.46□□□□□ -1.86
HMGB3P13-201ENST00000511263 IGKV3-11P04433 115 aa3.46□□□□□ -1.86
HMGB3P13-201ENST00000511263 HMGN2P05204 90 aaKnown RBP3.46□□□□□ -1.86
HMGB3P13-201ENST00000511263 ARL14EPLP0DKL9 152 aa3.46□□□□□ -1.86
HMGB3P13-201ENST00000511263 CCL4P13236 92 aa3.46□□□□□ -1.86
HMGB3P13-201ENST00000511263 APOC4P55056 127 aa3.46□□□□□ -1.86
HMGB3P13-201ENST00000511263 FXYD4P59646 89 aa3.46□□□□□ -1.86
HMGB3P13-201ENST00000511263 DAZ2Q13117 558 aaKnown RBP3.46□□□□□ -1.86
HMGB3P13-201ENST00000511263 ORMDL2Q53FV1 153 aa3.46□□□□□ -1.86
HMGB3P13-201ENST00000511263 FHL5Q5TD97 284 aa3.46□□□□□ -1.86
HMGB3P13-201ENST00000511263 IGFL2Q6UWQ7 119 aa3.46□□□□□ -1.86
HMGB3P13-201ENST00000511263 DAZ4Q86SG3 579 aaKnown RBP3.46□□□□□ -1.86
HMGB3P13-201ENST00000511263 IMMP1LQ96LU5 166 aa3.46□□□□□ -1.86
HMGB3P13-201ENST00000511263 UPK3BQ9BT76 320 aa3.46□□□□□ -1.86
HMGB3P13-201ENST00000511263 DAZ3Q9NR90 486 aaKnown RBP3.46□□□□□ -1.86
HMGB3P13-201ENST00000511263 SLC25A15Q9Y619 301 aa3.46□□□□□ -1.86
HMGB3P13-201ENST00000511263 LHFPL6Q9Y693 200 aa3.46□□□□□ -1.86
HMGB3P13-201ENST00000511263 SMAD5-AS1Q9Y6J3 95 aa3.46□□□□□ -1.86
HMGB3P13-201ENST00000511263 NCOR1O75376 2440 aa3.46□□□□□ -1.86
HMGB3P13-201ENST00000511263 GTF3C1Q12789 2109 aa3.46□□□□□ -1.86
HMGB3P13-201ENST00000511263 LAMA2P24043 3122 aaKnown RBP3.45□□□□□ -1.86
HMGB3P13-201ENST00000511263 A0A0A6YYD4 124 aa3.45□□□□□ -1.86
HMGB3P13-201ENST00000511263 A0A0B4J2C4 111 aa3.45□□□□□ -1.86
HMGB3P13-201ENST00000511263 HIGD1CA8MV81 97 aa3.45□□□□□ -1.86
HMGB3P13-201ENST00000511263 H3BP45 60 aa3.45□□□□□ -1.86
HMGB3P13-201ENST00000511263 BGLAPP02818 100 aa3.45□□□□□ -1.86
HMGB3P13-201ENST00000511263 COX6CP09669 75 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms