RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 Q6ZQT7 251 aa8.38□□□□□ -1.07
CMSS1-208ENST00000496116 OR1N2Q8NGR9 330 aa8.38□□□□□ -1.07
CMSS1-208ENST00000496116 FAM19A4Q96LR4 140 aa8.38□□□□□ -1.07
CMSS1-208ENST00000496116 PRSS47A8MTI9 375 aa8.38□□□□□ -1.07
CMSS1-208ENST00000496116 C12orf54Q6X4T0 127 aa8.38□□□□□ -1.07
CMSS1-208ENST00000496116 APRG1Q8IVJ8 170 aa8.38□□□□□ -1.07
CMSS1-208ENST00000496116 DEFB125Q8N687 156 aa8.38□□□□□ -1.07
CMSS1-208ENST00000496116 MRAP2Q96G30 205 aa8.38□□□□□ -1.07
CMSS1-208ENST00000496116 MED14OSP0DP75 135 aa8.37□□□□□ -1.07
CMSS1-208ENST00000496116 GATA1P15976 413 aaPredicted RBP8.37□□□□□ -1.07
CMSS1-208ENST00000496116 ZNF124Q15973 351 aa8.37□□□□□ -1.07
CMSS1-208ENST00000496116 PHLDA3Q9Y5J5 127 aa8.37□□□□□ -1.07
CMSS1-208ENST00000496116 F6UB75 175 aa8.36□□□□□ -1.07
CMSS1-208ENST00000496116 RNASE4P34096 147 aaKnown RBP8.36□□□□□ -1.07
CMSS1-208ENST00000496116 MPV17L2Q567V2 206 aa8.36□□□□□ -1.07
CMSS1-208ENST00000496116 VPREB3Q9UKI3 123 aa8.36□□□□□ -1.07
CMSS1-208ENST00000496116 IGLV2-18A0A075B6J9 118 aa8.36□□□□□ -1.07
CMSS1-208ENST00000496116 DEFB1P60022 68 aa8.36□□□□□ -1.07
CMSS1-208ENST00000496116 ANXA2RQ3ZCQ2 193 aa8.36□□□□□ -1.07
CMSS1-208ENST00000496116 NRACQ8N912 160 aa8.36□□□□□ -1.07
CMSS1-208ENST00000496116 ORAOV1Q8WV07 137 aa8.36□□□□□ -1.07
CMSS1-208ENST00000496116 C18orf15Q96N68 181 aa8.36□□□□□ -1.07
CMSS1-208ENST00000496116 TP73-AS1Q9UF72 201 aa8.36□□□□□ -1.07
CMSS1-208ENST00000496116 CSPG4Q6UVK1 2322 aa8.35□□□□□ -1.07
CMSS1-208ENST00000496116 MYO18BQ8IUG5 2567 aa8.35□□□□□ -1.07
CMSS1-208ENST00000496116 TRAV26-2A0A0B4J265 109 aa8.35□□□□□ -1.07
CMSS1-208ENST00000496116 A1L4Q6 167 aa8.35□□□□□ -1.07
CMSS1-208ENST00000496116 RNF223E7ERA6 249 aa8.35□□□□□ -1.07
CMSS1-208ENST00000496116 M0R381 172 aa8.35□□□□□ -1.07
CMSS1-208ENST00000496116 NUDT3O95989 172 aa8.35□□□□□ -1.07
CMSS1-208ENST00000496116 NPSP0C0P6 89 aa8.35□□□□□ -1.07
CMSS1-208ENST00000496116 LAGE3Q14657 143 aa8.35□□□□□ -1.07
CMSS1-208ENST00000496116 PSMG4Q5JS54 123 aa8.35□□□□□ -1.07
CMSS1-208ENST00000496116 MAPK1IP1LQ8NDC0 245 aa8.35□□□□□ -1.07
CMSS1-208ENST00000496116 DCANP1Q8TF63 244 aa8.35□□□□□ -1.07
CMSS1-208ENST00000496116 TMEM158Q8WZ71 300 aa8.35□□□□□ -1.07
CMSS1-208ENST00000496116 DPH3P1Q9H4G8 78 aa8.35□□□□□ -1.07
CMSS1-208ENST00000496116 SRD5A1P18405 259 aa8.35□□□□□ -1.07
CMSS1-208ENST00000496116 WFDC3Q8IUB2 231 aa8.35□□□□□ -1.07
CMSS1-208ENST00000496116 BBC3Q96PG8 261 aaPredicted RBP8.35□□□□□ -1.07
CMSS1-208ENST00000496116 ATP5LO75964 103 aa8.34□□□□□ -1.07
CMSS1-208ENST00000496116 PRSS1P07477 247 aa8.34□□□□□ -1.07
CMSS1-208ENST00000496116 ELANEP08246 267 aa8.34□□□□□ -1.07
CMSS1-208ENST00000496116 SRSF1Q07955 248 aaKnown RBP eCLIP8.34□□□□□ -1.07
CMSS1-208ENST00000496116 BVES-AS1Q5T3Y7 98 aa8.34□□□□□ -1.07
CMSS1-208ENST00000496116 Q6YL49 198 aa8.34□□□□□ -1.07
CMSS1-208ENST00000496116 ZNF843Q8N446 348 aa8.34□□□□□ -1.07
CMSS1-208ENST00000496116 COX11Q9Y6N1 276 aa8.34□□□□□ -1.07
CMSS1-208ENST00000496116 ANKRD17O75179 2603 aaKnown RBP8.34□□□□□ -1.07
CMSS1-208ENST00000496116 KLLNB2CW77 178 aa8.33□□□□□ -1.08
CMSS1-208ENST00000496116 IGHV4-31P0DP07 118 aa8.33□□□□□ -1.08
CMSS1-208ENST00000496116 SNRPD3P62318 126 aaKnown RBP8.33□□□□□ -1.08
CMSS1-208ENST00000496116 ANKRD39Q53RE8 183 aa8.33□□□□□ -1.08
CMSS1-208ENST00000496116 C10orf99Q6UWK7 81 aa8.33□□□□□ -1.08
CMSS1-208ENST00000496116 MYOZ3Q8TDC0 251 aa8.33□□□□□ -1.08
CMSS1-208ENST00000496116 BEX4Q9NWD9 120 aaPredicted RBP8.33□□□□□ -1.08
CMSS1-208ENST00000496116 CD5LO43866 347 aa8.33□□□□□ -1.08
CMSS1-208ENST00000496116 FSHBP01225 129 aa8.33□□□□□ -1.08
CMSS1-208ENST00000496116 LGALS1P09382 135 aaKnown RBP8.33□□□□□ -1.08
CMSS1-208ENST00000496116 SMIM17P0DL12 118 aa8.33□□□□□ -1.08
CMSS1-208ENST00000496116 EDN2P20800 178 aa8.33□□□□□ -1.08
CMSS1-208ENST00000496116 FAM159AQ6UWV7 190 aa8.33□□□□□ -1.08
CMSS1-208ENST00000496116 LRRC75A-AS1Q8N1F1 130 aa8.33□□□□□ -1.08
CMSS1-208ENST00000496116 AP1S3Q96PC3 154 aa8.33□□□□□ -1.08
CMSS1-208ENST00000496116 SELENOKQ9Y6D0 94 aa8.33□□□□□ -1.08
CMSS1-208ENST00000496116 CELSR2Q9HCU4 2923 aa8.32□□□□□ -1.08
CMSS1-208ENST00000496116 PPP1R17O96001 155 aa8.32□□□□□ -1.08
CMSS1-208ENST00000496116 ODF1Q14990 250 aa8.32□□□□□ -1.08
CMSS1-208ENST00000496116 C21orf62-AS1Q17RA5 79 aa8.32□□□□□ -1.08
CMSS1-208ENST00000496116 DEFB113Q30KQ7 82 aa8.32□□□□□ -1.08
CMSS1-208ENST00000496116 BOD1L2Q8IYS8 172 aa8.32□□□□□ -1.08
CMSS1-208ENST00000496116 C20orf78Q9BR46 151 aa8.32□□□□□ -1.08
CMSS1-208ENST00000496116 SMIM2Q9BVW6 85 aa8.32□□□□□ -1.08
CMSS1-208ENST00000496116 DKK2Q9UBU2 259 aa8.32□□□□□ -1.08
CMSS1-208ENST00000496116 CRYBG3Q68DQ2 2970 aa8.32□□□□□ -1.08
CMSS1-208ENST00000496116 A6NJY4 79 aa8.32□□□□□ -1.08
CMSS1-208ENST00000496116 K7EMI3 77 aa8.32□□□□□ -1.08
CMSS1-208ENST00000496116 LGALS9O00182 355 aa8.32□□□□□ -1.08
CMSS1-208ENST00000496116 GNRH2O43555 120 aa8.32□□□□□ -1.08
CMSS1-208ENST00000496116 FGF6P10767 208 aa8.32□□□□□ -1.08
CMSS1-208ENST00000496116 RNASE3P12724 160 aaKnown RBP8.32□□□□□ -1.08
CMSS1-208ENST00000496116 SUMO2P61956 95 aaKnown RBP8.32□□□□□ -1.08
CMSS1-208ENST00000496116 KIR3DS1Q14943 382 aa8.32□□□□□ -1.08
CMSS1-208ENST00000496116 ORMDL2Q53FV1 153 aa8.32□□□□□ -1.08
CMSS1-208ENST00000496116 C2orf91Q6ZV80 131 aa8.32□□□□□ -1.08
CMSS1-208ENST00000496116 C14orf178Q8N769 122 aaPredicted RBP8.32□□□□□ -1.08
CMSS1-208ENST00000496116 OR9G4Q8NGQ1 327 aa8.32□□□□□ -1.08
CMSS1-208ENST00000496116 UBE2E2Q96LR5 201 aa8.32□□□□□ -1.08
CMSS1-208ENST00000496116 ODF3Q96PU9 254 aa8.32□□□□□ -1.08
CMSS1-208ENST00000496116 MAP1AP78559 2803 aaPredicted RBP8.31□□□□□ -1.08
CMSS1-208ENST00000496116 SIVA1O15304 175 aa8.31□□□□□ -1.08
CMSS1-208ENST00000496116 IGKCP01834 107 aa8.31□□□□□ -1.08
CMSS1-208ENST00000496116 Q5PR19 223 aa8.31□□□□□ -1.08
CMSS1-208ENST00000496116 FOXC2Q99958 501 aa8.31□□□□□ -1.08
CMSS1-208ENST00000496116 ZMAT4Q9H898 229 aa8.31□□□□□ -1.08
CMSS1-208ENST00000496116 HOXA3O43365 443 aaPredicted RBP8.3□□□□□ -1.08
CMSS1-208ENST00000496116 MGPP08493 103 aa8.3□□□□□ -1.08
CMSS1-208ENST00000496116 ZNF688P0C7X2 276 aa8.3□□□□□ -1.08
CMSS1-208ENST00000496116 NMUP48645 174 aa8.3□□□□□ -1.08
CMSS1-208ENST00000496116 SYNJ2BPP57105 145 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms