RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 PRR26Q8N8Z3 221 aa4.33□□□□□ -1.72
PDLIM1-203ENST00000490391 OR52I2Q8NH67 350 aa4.33□□□□□ -1.72
PDLIM1-203ENST00000490391 YIPF6Q96EC8 236 aa4.33□□□□□ -1.72
PDLIM1-203ENST00000490391 DPH3Q96FX2 82 aa4.33□□□□□ -1.72
PDLIM1-203ENST00000490391 C14orf166Q9Y224 244 aaKnown RBP4.33□□□□□ -1.72
PDLIM1-203ENST00000490391 URGCP-MRPS24S4R325 110 aa4.33□□□□□ -1.72
PDLIM1-203ENST00000490391 SMCO3A2RU48 225 aa4.32□□□□□ -1.72
PDLIM1-203ENST00000490391 WRBO00258 174 aa4.32□□□□□ -1.72
PDLIM1-203ENST00000490391 GNRH2O43555 120 aa4.32□□□□□ -1.72
PDLIM1-203ENST00000490391 CIDEAO60543 219 aa4.32□□□□□ -1.72
PDLIM1-203ENST00000490391 MGST1P10620 155 aaKnown RBP4.32□□□□□ -1.72
PDLIM1-203ENST00000490391 INPP1P49441 399 aa4.32□□□□□ -1.72
PDLIM1-203ENST00000490391 SLC38A11Q08AI6 406 aa4.32□□□□□ -1.72
PDLIM1-203ENST00000490391 ELOBQ15370 118 aa4.32□□□□□ -1.72
PDLIM1-203ENST00000490391 SURF2Q15527 256 aaPredicted RBP4.32□□□□□ -1.72
PDLIM1-203ENST00000490391 KRTAP5-1Q6L8H4 278 aa4.32□□□□□ -1.72
PDLIM1-203ENST00000490391 FAM159AQ6UWV7 190 aa4.32□□□□□ -1.72
PDLIM1-203ENST00000490391 EXOC3-AS1Q8N2X6 119 aa4.32□□□□□ -1.72
PDLIM1-203ENST00000490391 OR51S1Q8NGJ8 323 aa4.32□□□□□ -1.72
PDLIM1-203ENST00000490391 KRTAP2-2Q9BYT5 123 aa4.32□□□□□ -1.72
PDLIM1-203ENST00000490391 MTFP1Q9UDX5 166 aa4.32□□□□□ -1.72
PDLIM1-203ENST00000490391 GPR132Q9UNW8 380 aa4.32□□□□□ -1.72
PDLIM1-203ENST00000490391 PRELID1Q9Y255 219 aa4.32□□□□□ -1.72
PDLIM1-203ENST00000490391 A0A087WX48 190 aa4.31□□□□□ -1.72
PDLIM1-203ENST00000490391 LOC100506127A0A0U1RQW1 187 aa4.31□□□□□ -1.72
PDLIM1-203ENST00000490391 SYNGR2O43760 224 aa4.31□□□□□ -1.72
PDLIM1-203ENST00000490391 HIST1H1EP10412 219 aaKnown RBP4.31□□□□□ -1.72
PDLIM1-203ENST00000490391 TGFBR1P36897 503 aa4.31□□□□□ -1.72
PDLIM1-203ENST00000490391 ZNF138P52744 262 aa4.31□□□□□ -1.72
PDLIM1-203ENST00000490391 RPP30P78346 268 aaKnown RBP4.31□□□□□ -1.72
PDLIM1-203ENST00000490391 SPANXN5Q5MJ07 72 aa4.31□□□□□ -1.72
PDLIM1-203ENST00000490391 FAAP20Q6NZ36 180 aa4.31□□□□□ -1.72
PDLIM1-203ENST00000490391 RAB2BQ8WUD1 216 aa4.31□□□□□ -1.72
PDLIM1-203ENST00000490391 CIB3Q96Q77 187 aaPredicted RBP4.31□□□□□ -1.72
PDLIM1-203ENST00000490391 FCGBPQ9Y6R7 5405 aaPredicted RBP4.31□□□□□ -1.72
PDLIM1-203ENST00000490391 AGPAT2O15120 278 aa4.3□□□□□ -1.72
PDLIM1-203ENST00000490391 CTDSPLO15194 276 aa4.3□□□□□ -1.72
PDLIM1-203ENST00000490391 COX7A2P2O60397 106 aa4.3□□□□□ -1.72
PDLIM1-203ENST00000490391 APOA1P02647 267 aa4.3□□□□□ -1.72
PDLIM1-203ENST00000490391 TCRBP04435 133 aa4.3□□□□□ -1.72
PDLIM1-203ENST00000490391 TYMSP04818 313 aa4.3□□□□□ -1.72
PDLIM1-203ENST00000490391 AQP4P55087 323 aa4.3□□□□□ -1.72
PDLIM1-203ENST00000490391 CACNG7P62955 275 aa4.3□□□□□ -1.72
PDLIM1-203ENST00000490391 PDE6HQ13956 83 aa4.3□□□□□ -1.72
PDLIM1-203ENST00000490391 ZNF876PQ49A33 203 aa4.3□□□□□ -1.72
PDLIM1-203ENST00000490391 C10orf113Q5VZT2 155 aa4.3□□□□□ -1.72
PDLIM1-203ENST00000490391 Q6ZRP5 223 aa4.3□□□□□ -1.72
PDLIM1-203ENST00000490391 CROCCP3Q8IVE0 287 aa4.3□□□□□ -1.72
PDLIM1-203ENST00000490391 LYPD6BQ8NI32 183 aa4.3□□□□□ -1.72
PDLIM1-203ENST00000490391 NRG4Q8WWG1 115 aa4.3□□□□□ -1.72
PDLIM1-203ENST00000490391 LINC00479Q96M42 142 aa4.3□□□□□ -1.72
PDLIM1-203ENST00000490391 SAMD10Q9BYL1 202 aa4.3□□□□□ -1.72
PDLIM1-203ENST00000490391 C20orf85Q9H1P6 137 aa4.3□□□□□ -1.72
PDLIM1-203ENST00000490391 STRAPQ9Y3F4 350 aaKnown RBP4.3□□□□□ -1.72
PDLIM1-203ENST00000490391 SMIM31A0A1B0GVY4 71 aa4.29□□□□□ -1.72
PDLIM1-203ENST00000490391 PGPA6NDG6 321 aa4.29□□□□□ -1.72
PDLIM1-203ENST00000490391 FNDC10F2Z333 226 aa4.29□□□□□ -1.72
PDLIM1-203ENST00000490391 GOSR2O14653 212 aa4.29□□□□□ -1.72
PDLIM1-203ENST00000490391 MED6O75586 246 aa4.29□□□□□ -1.72
PDLIM1-203ENST00000490391 RAB3DO95716 219 aa4.29□□□□□ -1.72
PDLIM1-203ENST00000490391 CRPP02741 224 aa4.29□□□□□ -1.72
PDLIM1-203ENST00000490391 HOXB5P09067 269 aa4.29□□□□□ -1.72
PDLIM1-203ENST00000490391 CAV2P51636 162 aa4.29□□□□□ -1.72
PDLIM1-203ENST00000490391 RRAS2P62070 204 aaPredicted RBP4.29□□□□□ -1.72
PDLIM1-203ENST00000490391 COX6A2Q02221 97 aa4.29□□□□□ -1.72
PDLIM1-203ENST00000490391 MIAQ16674 131 aa4.29□□□□□ -1.72
PDLIM1-203ENST00000490391 MAJINQ3KP22 176 aa4.29□□□□□ -1.72
PDLIM1-203ENST00000490391 STPG4Q8N801 248 aa4.29□□□□□ -1.72
PDLIM1-203ENST00000490391 C15orf54Q8N8G6 183 aa4.29□□□□□ -1.72
PDLIM1-203ENST00000490391 TMEM75Q8N9X5 138 aa4.29□□□□□ -1.72
PDLIM1-203ENST00000490391 TMEM229BQ8NBD8 167 aa4.29□□□□□ -1.72
PDLIM1-203ENST00000490391 SOSTQ9BQB4 213 aa4.29□□□□□ -1.72
PDLIM1-203ENST00000490391 MLST8Q9BVC4 326 aa4.29□□□□□ -1.72
PDLIM1-203ENST00000490391 NPVFQ9HCQ7 196 aa4.29□□□□□ -1.72
PDLIM1-203ENST00000490391 NAGKQ9UJ70 344 aa4.29□□□□□ -1.72
PDLIM1-203ENST00000490391 BLOC1S6Q9UL45 172 aa4.29□□□□□ -1.72
PDLIM1-203ENST00000490391 KCNIP3Q9Y2W7 256 aa4.29□□□□□ -1.72
PDLIM1-203ENST00000490391 IGKV2-24A0A0C4DH68 120 aa4.28□□□□□ -1.72
PDLIM1-203ENST00000490391 DUXBA0A1W2PPF3 345 aa4.28□□□□□ -1.72
PDLIM1-203ENST00000490391 hDV102S1A0JD36 115 aa4.28□□□□□ -1.72
PDLIM1-203ENST00000490391 SLC25A6P12236 298 aa4.28□□□□□ -1.72
PDLIM1-203ENST00000490391 TAS2R19P59542 299 aa4.28□□□□□ -1.72
PDLIM1-203ENST00000490391 MPV17L2Q567V2 206 aa4.28□□□□□ -1.72
PDLIM1-203ENST00000490391 ZNF506Q5JVG8 444 aa4.28□□□□□ -1.72
PDLIM1-203ENST00000490391 IZUMO2Q6UXV1 221 aa4.28□□□□□ -1.72
PDLIM1-203ENST00000490391 PRSS3P2Q8NHM4 247 aa4.28□□□□□ -1.72
PDLIM1-203ENST00000490391 MGST2Q99735 147 aa4.28□□□□□ -1.72
PDLIM1-203ENST00000490391 VCXQ9H320 206 aa4.28□□□□□ -1.72
PDLIM1-203ENST00000490391 PRR34Q9NV39 138 aa4.28□□□□□ -1.72
PDLIM1-203ENST00000490391 TMEM14CQ9P0S9 112 aa4.28□□□□□ -1.72
PDLIM1-203ENST00000490391 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.27□□□□□ -1.73
PDLIM1-203ENST00000490391 PGPEP1LA6NFU8 196 aa4.27□□□□□ -1.73
PDLIM1-203ENST00000490391 SMIM18P0DKX4 95 aa4.27□□□□□ -1.73
PDLIM1-203ENST00000490391 PYYP10082 97 aa4.27□□□□□ -1.73
PDLIM1-203ENST00000490391 LINC01547P58512 204 aaPredicted RBP4.27□□□□□ -1.73
PDLIM1-203ENST00000490391 GABARAPL2P60520 117 aa4.27□□□□□ -1.73
PDLIM1-203ENST00000490391 SRPXP78539 464 aa4.27□□□□□ -1.73
PDLIM1-203ENST00000490391 UFSP1Q6NVU6 142 aa4.27□□□□□ -1.73
PDLIM1-203ENST00000490391 TMEM14EPQ6UXP3 125 aa4.27□□□□□ -1.73
PDLIM1-203ENST00000490391 ZFP2Q6ZN57 461 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms