RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-238ENST00000479894 PRNTQ86SH4 94 aa11.06□□□□□ -0.64
HDLBP-238ENST00000479894 NEU1Q99519 415 aa11.06□□□□□ -0.64
HDLBP-238ENST00000479894 BIN3Q9NQY0 253 aa11.06□□□□□ -0.64
HDLBP-238ENST00000479894 MED9Q9NWA0 146 aa11.06□□□□□ -0.64
HDLBP-238ENST00000479894 RNASE4P34096 147 aaKnown RBP11.05□□□□□ -0.64
HDLBP-238ENST00000479894 FXYD7P58549 80 aa11.05□□□□□ -0.64
HDLBP-238ENST00000479894 CSNK1G2-AS1Q8NCQ2 148 aa11.05□□□□□ -0.64
HDLBP-238ENST00000479894 SMIM12Q96EX1 92 aa11.05□□□□□ -0.64
HDLBP-238ENST00000479894 LINC01587Q99440 93 aa11.05□□□□□ -0.64
HDLBP-238ENST00000479894 CELA1Q9UNI1 258 aa11.05□□□□□ -0.64
HDLBP-238ENST00000479894 TRAV21A0A0B4J279 112 aa11.04□□□□□ -0.64
HDLBP-238ENST00000479894 TMEM189A5PLL7 270 aa11.04□□□□□ -0.64
HDLBP-238ENST00000479894 EPM2AB3EWF7 344 aa11.04□□□□□ -0.64
HDLBP-238ENST00000479894 TOR2AQ5JU69 321 aa11.04□□□□□ -0.64
HDLBP-238ENST00000479894 ZNF705AQ6ZN79 300 aaPredicted RBP11.04□□□□□ -0.64
HDLBP-238ENST00000479894 Q8TAT8 98 aa11.04□□□□□ -0.64
HDLBP-238ENST00000479894 PYGO2Q9BRQ0 406 aa11.04□□□□□ -0.64
HDLBP-238ENST00000479894 TRAV12-2A0A075B6T6 113 aa11.03□□□□□ -0.64
HDLBP-238ENST00000479894 TRAV8-1A0A0A6YYK1 113 aa11.03□□□□□ -0.64
HDLBP-238ENST00000479894 SCO2A0A1W2PP80 73 aa11.03□□□□□ -0.64
HDLBP-238ENST00000479894 CRXO43186 299 aaPredicted RBP11.03□□□□□ -0.64
HDLBP-238ENST00000479894 LTAP01374 205 aa11.03□□□□□ -0.64
HDLBP-238ENST00000479894 IGLV2-11P01706 119 aa11.03□□□□□ -0.64
HDLBP-238ENST00000479894 PRB4P10163 310 aaPredicted RBP11.03□□□□□ -0.64
HDLBP-238ENST00000479894 RRN3P1Q2M238 152 aa11.03□□□□□ -0.64
HDLBP-238ENST00000479894 GFI1BQ5VTD9 330 aa11.03□□□□□ -0.64
HDLBP-238ENST00000479894 ZNF493Q6ZR52 646 aa11.03□□□□□ -0.64
HDLBP-238ENST00000479894 Q86TA4 180 aa11.03□□□□□ -0.64
HDLBP-238ENST00000479894 BAGE2Q86Y30 109 aa11.03□□□□□ -0.64
HDLBP-238ENST00000479894 ZFAND2AQ8N6M9 145 aa11.03□□□□□ -0.64
HDLBP-238ENST00000479894 TRAV12-3A0A0B4J271 114 aa11.02□□□□□ -0.65
HDLBP-238ENST00000479894 TRAV34A0A0B4J273 112 aa11.02□□□□□ -0.65
HDLBP-238ENST00000479894 RGS13O14921 159 aa11.02□□□□□ -0.65
HDLBP-238ENST00000479894 INAFM2P0DMQ5 153 aa11.02□□□□□ -0.65
HDLBP-238ENST00000479894 RPL35P42766 123 aaKnown RBP11.02□□□□□ -0.65
HDLBP-238ENST00000479894 GNG4P50150 75 aa11.02□□□□□ -0.65
HDLBP-238ENST00000479894 FAM3BP58499 235 aaPredicted RBP11.02□□□□□ -0.65
HDLBP-238ENST00000479894 Q6AWC8 147 aa11.02□□□□□ -0.65
HDLBP-238ENST00000479894 COX8CQ7Z4L0 72 aa11.02□□□□□ -0.65
HDLBP-238ENST00000479894 TMEM183AQ8IXX5 376 aa11.02□□□□□ -0.65
HDLBP-238ENST00000479894 KCNS1Q96KK3 526 aa11.02□□□□□ -0.65
HDLBP-238ENST00000479894 LINC00467Q9BRT7 94 aa11.02□□□□□ -0.65
HDLBP-238ENST00000479894 IGHV3OR16-12A0A075B7B8 117 aa11.01□□□□□ -0.65
HDLBP-238ENST00000479894 RAB19A4D1S5 217 aa11.01□□□□□ -0.65
HDLBP-238ENST00000479894 FABP5P3A8MUU1 101 aa11.01□□□□□ -0.65
HDLBP-238ENST00000479894 J3KRW8 73 aa11.01□□□□□ -0.65
HDLBP-238ENST00000479894 IFITM2Q01629 132 aa11.01□□□□□ -0.65
HDLBP-238ENST00000479894 FAM74A3Q4VXF1 159 aa11.01□□□□□ -0.65
HDLBP-238ENST00000479894 FAM159AQ6UWV7 190 aa11.01□□□□□ -0.65
HDLBP-238ENST00000479894 SGK494Q96LW2 274 aa11.01□□□□□ -0.65
HDLBP-238ENST00000479894 LINC00479Q96M42 142 aa11.01□□□□□ -0.65
HDLBP-238ENST00000479894 TEX48A0A1B0GUV7 120 aa11□□□□□ -0.65
HDLBP-238ENST00000479894 PFN1P07737 140 aaKnown RBP11□□□□□ -0.65
HDLBP-238ENST00000479894 FAM162BQ5T6X4 162 aa11□□□□□ -0.65
HDLBP-238ENST00000479894 C1orf158Q8N1D5 194 aa11□□□□□ -0.65
HDLBP-238ENST00000479894 ZNF324O75467 553 aaPredicted RBP10.99□□□□□ -0.65
HDLBP-238ENST00000479894 GCGP01275 180 aa10.99□□□□□ -0.65
HDLBP-238ENST00000479894 BTN1A1Q13410 526 aa10.99□□□□□ -0.65
HDLBP-238ENST00000479894 C6orf223Q8N319 242 aa10.99□□□□□ -0.65
HDLBP-238ENST00000479894 EIF4E3Q8N5X7 224 aaKnown RBP10.99□□□□□ -0.65
HDLBP-238ENST00000479894 PCNPQ8WW12 178 aaKnown RBP10.99□□□□□ -0.65
HDLBP-238ENST00000479894 C16orf74Q96GX8 76 aa10.99□□□□□ -0.65
HDLBP-238ENST00000479894 IGHV1OR15-1A0A075B7D0 117 aa10.98□□□□□ -0.65
HDLBP-238ENST00000479894 C9JCJ5 164 aa10.98□□□□□ -0.65
HDLBP-238ENST00000479894 ANXA2RQ3ZCQ2 193 aa10.98□□□□□ -0.65
HDLBP-238ENST00000479894 TVP23CQ96ET8 276 aa10.98□□□□□ -0.65
HDLBP-238ENST00000479894 SRRM2Q9UQ35 2752 aaKnown RBP10.97□□□□□ -0.65
HDLBP-238ENST00000479894 TRGV11A0A075B6L2 103 aa10.97□□□□□ -0.65
HDLBP-238ENST00000479894 CBY3A6NI87 242 aa10.97□□□□□ -0.65
HDLBP-238ENST00000479894 CEBPGP53567 150 aa10.97□□□□□ -0.65
HDLBP-238ENST00000479894 TDRG1Q3Y452 100 aa10.97□□□□□ -0.65
HDLBP-238ENST00000479894 CENPWQ5EE01 88 aa10.97□□□□□ -0.65
HDLBP-238ENST00000479894 UQCC3Q6UW78 93 aa10.97□□□□□ -0.65
HDLBP-238ENST00000479894 SPATA12Q7Z6I5 190 aa10.97□□□□□ -0.65
HDLBP-238ENST00000479894 TMEM263Q8WUH6 116 aaKnown RBP10.97□□□□□ -0.65
HDLBP-238ENST00000479894 DAZAP1Q96EP5 407 aaKnown RBP10.97□□□□□ -0.65
HDLBP-238ENST00000479894 SDF2L1Q9HCN8 221 aa10.97□□□□□ -0.65
HDLBP-238ENST00000479894 LY96Q9Y6Y9 160 aa10.97□□□□□ -0.65
HDLBP-238ENST00000479894 FLG2Q5D862 2391 aaPredicted RBP10.97□□□□□ -0.65
HDLBP-238ENST00000479894 MYCBP2O75592 4640 aa10.97□□□□□ -0.65
HDLBP-238ENST00000479894 ZNF727A8MUV8 499 aa10.96□□□□□ -0.65
HDLBP-238ENST00000479894 SRP19P09132 144 aaKnown RBP10.96□□□□□ -0.65
HDLBP-238ENST00000479894 SPART-AS1P0CW21 52 aa10.96□□□□□ -0.65
HDLBP-238ENST00000479894 HTN1P15515 57 aa10.96□□□□□ -0.65
HDLBP-238ENST00000479894 ZNF674Q2M3X9 581 aa10.96□□□□□ -0.65
HDLBP-238ENST00000479894 C8orf49Q96NF6 230 aa10.96□□□□□ -0.65
HDLBP-238ENST00000479894 SMIM7Q9BQ49 75 aa10.96□□□□□ -0.65
HDLBP-238ENST00000479894 MLST8Q9BVC4 326 aa10.96□□□□□ -0.65
HDLBP-238ENST00000479894 PARLQ9H300 379 aa10.96□□□□□ -0.65
HDLBP-238ENST00000479894 SNURFLB1AK76 121 aa10.95□□□□□ -0.66
HDLBP-238ENST00000479894 KIR3DS1Q14943 382 aa10.95□□□□□ -0.66
HDLBP-238ENST00000479894 IBA57Q5T440 356 aaKnown RBP10.95□□□□□ -0.66
HDLBP-238ENST00000479894 DERL1Q9BUN8 251 aa10.95□□□□□ -0.66
HDLBP-238ENST00000479894 NBDYA0A0U1RRE5 68 aa10.94□□□□□ -0.66
HDLBP-238ENST00000479894 XKRY2A2RUG3 117 aa10.94□□□□□ -0.66
HDLBP-238ENST00000479894 ZNF705GA8MUZ8 300 aaPredicted RBP10.94□□□□□ -0.66
HDLBP-238ENST00000479894 ORM1P02763 201 aa10.94□□□□□ -0.66
HDLBP-238ENST00000479894 MGST1P10620 155 aaKnown RBP10.94□□□□□ -0.66
HDLBP-238ENST00000479894 PRR9Q5T870 116 aa10.94□□□□□ -0.66
HDLBP-238ENST00000479894 ZC2HC1AQ96GY0 325 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms