RNA–Protein interactions for RNA: ENST00000477567.5

MMP11-208, Transcript of matrix metallopeptidase 11, human

TSL 5

Gene MMP11, Length 929 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MMP11-208	ENST00000477567	LINC01559	Q495D7	138 aa		11.23	□□□□□ -0.61
MMP11-208	ENST00000477567	MUC21	Q5SSG8	566 aa		11.23	□□□□□ -0.61
MMP11-208	ENST00000477567	ZNF575	Q86XF7	245 aa		11.23	□□□□□ -0.61
MMP11-208	ENST00000477567	RNASE8	Q8TDE3	154 aa	Known RBP	11.23	□□□□□ -0.61
MMP11-208	ENST00000477567	TMEM263	Q8WUH6	116 aa	Known RBP	11.23	□□□□□ -0.61
MMP11-208	ENST00000477567	SDF2L1	Q9HCN8	221 aa		11.23	□□□□□ -0.61
MMP11-208	ENST00000477567	TP53TG3	Q9ULZ0	132 aa		11.23	□□□□□ -0.61
MMP11-208	ENST00000477567	MUC4	Q99102	2169 aa		11.23	□□□□□ -0.61
MMP11-208	ENST00000477567	IGHV4-28	A0A0C4DH34	117 aa		11.22	□□□□□ -0.61
MMP11-208	ENST00000477567	PLAC8L1	A1L4L8	177 aa		11.22	□□□□□ -0.61
MMP11-208	ENST00000477567	KRBOX1	C9JBD0	128 aa		11.22	□□□□□ -0.61
MMP11-208	ENST00000477567	ADCYAP1	P18509	176 aa		11.22	□□□□□ -0.61
MMP11-208	ENST00000477567	RPL23	P62829	140 aa	Known RBP	11.22	□□□□□ -0.61
MMP11-208	ENST00000477567	OR5I1	Q13606	314 aa		11.22	□□□□□ -0.61
MMP11-208	ENST00000477567	DNLZ	Q5SXM8	178 aa		11.22	□□□□□ -0.61
MMP11-208	ENST00000477567	IBA57	Q5T440	356 aa	Known RBP	11.22	□□□□□ -0.61
MMP11-208	ENST00000477567	PRR27	Q6MZM9	219 aa		11.22	□□□□□ -0.61
MMP11-208	ENST00000477567	FAM231D	Q6ZW35	169 aa		11.22	□□□□□ -0.61
MMP11-208	ENST00000477567	C16orf74	Q96GX8	76 aa		11.22	□□□□□ -0.61
MMP11-208	ENST00000477567	SEC11C	Q9BY50	192 aa		11.22	□□□□□ -0.61
MMP11-208	ENST00000477567	C11orf68	Q9H3H3	251 aa	Known RBP	11.22	□□□□□ -0.61
MMP11-208	ENST00000477567	TMEM189	A5PLL7	270 aa		11.21	□□□□□ -0.61
MMP11-208	ENST00000477567	CBY3	A6NI87	242 aa		11.21	□□□□□ -0.61
MMP11-208	ENST00000477567	ORM1	P02763	201 aa		11.21	□□□□□ -0.61
MMP11-208	ENST00000477567	HTN1	P15515	57 aa		11.21	□□□□□ -0.61
MMP11-208	ENST00000477567	NDUFA5	Q16718	116 aa		11.21	□□□□□ -0.61
MMP11-208	ENST00000477567	C10orf91	Q5T1B1	145 aa		11.21	□□□□□ -0.61
MMP11-208	ENST00000477567	C11orf72	Q8NBR9	251 aa		11.21	□□□□□ -0.61
MMP11-208	ENST00000477567	NAGK	Q9UJ70	344 aa		11.21	□□□□□ -0.61
MMP11-208	ENST00000477567	TRGV11	A0A075B6L2	103 aa		11.2	□□□□□ -0.62
MMP11-208	ENST00000477567		B4DEV8	164 aa		11.2	□□□□□ -0.62
MMP11-208	ENST00000477567	TYMS	P04818	313 aa		11.2	□□□□□ -0.62
MMP11-208	ENST00000477567	CXCL1	P09341	107 aa		11.2	□□□□□ -0.62
MMP11-208	ENST00000477567	PNRC1	Q12796	327 aa	Predicted RBP	11.2	□□□□□ -0.62
MMP11-208	ENST00000477567	NUDT10	Q8NFP7	164 aa		11.2	□□□□□ -0.62
MMP11-208	ENST00000477567	IL17D	Q8TAD2	202 aa		11.2	□□□□□ -0.62
MMP11-208	ENST00000477567	ISOC2	Q96AB3	205 aa		11.2	□□□□□ -0.62
MMP11-208	ENST00000477567	DAZAP1	Q96EP5	407 aa	Known RBP	11.2	□□□□□ -0.62
MMP11-208	ENST00000477567	NUDT11	Q96G61	164 aa		11.2	□□□□□ -0.62
MMP11-208	ENST00000477567	IGHV3-16	A0A0C4DH30	117 aa		11.19	□□□□□ -0.62
MMP11-208	ENST00000477567	GNRH2	O43555	120 aa		11.19	□□□□□ -0.62
MMP11-208	ENST00000477567		P01737	135 aa		11.19	□□□□□ -0.62
MMP11-208	ENST00000477567	OSTC	Q9NRP0	149 aa		11.19	□□□□□ -0.62
MMP11-208	ENST00000477567		U3KQK5	164 aa		11.19	□□□□□ -0.62
MMP11-208	ENST00000477567		F8W036	122 aa		11.18	□□□□□ -0.62
MMP11-208	ENST00000477567		M0R036	132 aa		11.18	□□□□□ -0.62
MMP11-208	ENST00000477567	TCL1A	P56279	114 aa		11.18	□□□□□ -0.62
MMP11-208	ENST00000477567	DAZ2	Q13117	558 aa	Known RBP	11.18	□□□□□ -0.62
MMP11-208	ENST00000477567	RNASE7	Q9H1E1	156 aa	Known RBP	11.18	□□□□□ -0.62
MMP11-208	ENST00000477567	MDFIC	Q9P1T7	246 aa		11.18	□□□□□ -0.62
MMP11-208	ENST00000477567	CARHSP1	Q9Y2V2	147 aa	Known RBP	11.18	□□□□□ -0.62
MMP11-208	ENST00000477567	RPS20	P60866	119 aa	Known RBP	11.17	□□□□□ -0.62
MMP11-208	ENST00000477567	RPL19	P84098	196 aa	Known RBP	11.17	□□□□□ -0.62
MMP11-208	ENST00000477567	ZNF415	Q09FC8	603 aa		11.17	□□□□□ -0.62
MMP11-208	ENST00000477567	ADIRF	Q15847	76 aa		11.17	□□□□□ -0.62
MMP11-208	ENST00000477567	CT83	Q5H943	113 aa		11.17	□□□□□ -0.62
MMP11-208	ENST00000477567	SLC7A5P1	Q8MH63	180 aa		11.17	□□□□□ -0.62
MMP11-208	ENST00000477567	GSN-AS1	Q9NRJ2	163 aa		11.17	□□□□□ -0.62
MMP11-208	ENST00000477567	IL36B	Q9NZH7	164 aa		11.17	□□□□□ -0.62
MMP11-208	ENST00000477567	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	11.17	□□□□□ -0.62
MMP11-208	ENST00000477567	KMT2C	Q8NEZ4	4911 aa	Known RBP	11.17	□□□□□ -0.62
MMP11-208	ENST00000477567		A0A0J9YWU9	116 aa		11.16	□□□□□ -0.62
MMP11-208	ENST00000477567	DEFB4A	O15263	64 aa		11.16	□□□□□ -0.62
MMP11-208	ENST00000477567	RNASE3	P12724	160 aa	Known RBP	11.16	□□□□□ -0.62
MMP11-208	ENST00000477567	ERVFC1-1	P60608	527 aa		11.16	□□□□□ -0.62
MMP11-208	ENST00000477567	OR2D3	Q8NGH3	330 aa		11.16	□□□□□ -0.62
MMP11-208	ENST00000477567	SFRP2	Q96HF1	295 aa		11.16	□□□□□ -0.62
MMP11-208	ENST00000477567	C9orf85	Q96MD7	179 aa		11.16	□□□□□ -0.62
MMP11-208	ENST00000477567	SPX	Q9BT56	116 aa		11.16	□□□□□ -0.62
MMP11-208	ENST00000477567	RPP21	Q9H633	154 aa	Known RBP	11.16	□□□□□ -0.62
MMP11-208	ENST00000477567	EDA2R	Q9HAV5	297 aa		11.16	□□□□□ -0.62
MMP11-208	ENST00000477567	NACA	E9PAV3	2078 aa		11.15	□□□□□ -0.62
MMP11-208	ENST00000477567	XKRY2	A2RUG3	117 aa		11.15	□□□□□ -0.62
MMP11-208	ENST00000477567	LYRM9	A8MSI8	78 aa		11.15	□□□□□ -0.62
MMP11-208	ENST00000477567	SNURFL	B1AK76	121 aa		11.15	□□□□□ -0.62
MMP11-208	ENST00000477567	MED14OS	P0DP75	135 aa		11.15	□□□□□ -0.62
MMP11-208	ENST00000477567	ASIP	P42127	132 aa		11.15	□□□□□ -0.62
MMP11-208	ENST00000477567	SSBP4	Q9BWG4	385 aa	Predicted RBP	11.15	□□□□□ -0.62
MMP11-208	ENST00000477567	SCRT2	Q9NQ03	307 aa		11.15	□□□□□ -0.62
MMP11-208	ENST00000477567	DKK2	Q9UBU2	259 aa		11.15	□□□□□ -0.62
MMP11-208	ENST00000477567	RYR3	Q15413	4870 aa		11.15	□□□□□ -0.62
MMP11-208	ENST00000477567	TMSB15B	A0A087X1C1	80 aa		11.14	□□□□□ -0.63
MMP11-208	ENST00000477567	TEX48	A0A1B0GUV7	120 aa		11.14	□□□□□ -0.63
MMP11-208	ENST00000477567	GRIFIN	A4D1Z8	144 aa		11.14	□□□□□ -0.63
MMP11-208	ENST00000477567	GATC	O43716	136 aa	Known RBP	11.14	□□□□□ -0.63
MMP11-208	ENST00000477567	LGALS9B	Q3B8N2	356 aa		11.14	□□□□□ -0.63
MMP11-208	ENST00000477567	LINC00612	Q8N6U2	182 aa		11.14	□□□□□ -0.63
MMP11-208	ENST00000477567	C15orf54	Q8N8G6	183 aa		11.14	□□□□□ -0.63
MMP11-208	ENST00000477567	PTH2	Q96A98	100 aa		11.14	□□□□□ -0.63
MMP11-208	ENST00000477567	NOP10	Q9NPE3	64 aa	Known RBP	11.14	□□□□□ -0.63
MMP11-208	ENST00000477567		V9GYV3	84 aa		11.14	□□□□□ -0.63
MMP11-208	ENST00000477567	SNAI2	O43623	268 aa		11.13	□□□□□ -0.63
MMP11-208	ENST00000477567	SPINK4	O60575	86 aa		11.13	□□□□□ -0.63
MMP11-208	ENST00000477567	OR5AL1	P0C617	328 aa		11.13	□□□□□ -0.63
MMP11-208	ENST00000477567	IGLC6	P0CF74	106 aa		11.13	□□□□□ -0.63
MMP11-208	ENST00000477567	SPART-AS1	P0CW21	52 aa		11.13	□□□□□ -0.63
MMP11-208	ENST00000477567	S100A4	P26447	101 aa	Known RBP	11.13	□□□□□ -0.63
MMP11-208	ENST00000477567	EMP1	P54849	157 aa		11.13	□□□□□ -0.63
MMP11-208	ENST00000477567	FAM222A	Q5U5X8	452 aa		11.13	□□□□□ -0.63
MMP11-208	ENST00000477567	OR10G8	Q8NGN5	311 aa		11.13	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms