RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 PAXXQ9BUH6 204 aa7.89□□□□□ -1.15
HDAC6-219ENST00000476625 LYRM2Q9NU23 88 aaPredicted RBP7.89□□□□□ -1.15
HDAC6-219ENST00000476625 TRGV11A0A075B6L2 103 aa7.88□□□□□ -1.15
HDAC6-219ENST00000476625 K7EP13 123 aa7.88□□□□□ -1.15
HDAC6-219ENST00000476625 PLA2G10O15496 165 aa7.88□□□□□ -1.15
HDAC6-219ENST00000476625 HNRNPA3P51991 378 aaKnown RBP7.88□□□□□ -1.15
HDAC6-219ENST00000476625 BAALCQ8WXS3 180 aa7.88□□□□□ -1.15
HDAC6-219ENST00000476625 TVP23CQ96ET8 276 aa7.88□□□□□ -1.15
HDAC6-219ENST00000476625 SPXQ9BT56 116 aa7.88□□□□□ -1.15
HDAC6-219ENST00000476625 TRAV8-1A0A0A6YYK1 113 aa7.87□□□□□ -1.15
HDAC6-219ENST00000476625 DIRC3C9JPN6 131 aa7.87□□□□□ -1.15
HDAC6-219ENST00000476625 IL7P13232 177 aa7.87□□□□□ -1.15
HDAC6-219ENST00000476625 S100A11P31949 105 aa7.87□□□□□ -1.15
HDAC6-219ENST00000476625 DEFA1P59665 94 aa7.87□□□□□ -1.15
HDAC6-219ENST00000476625 DEFA3P59666 94 aa7.87□□□□□ -1.15
HDAC6-219ENST00000476625 IL15RAQ13261 267 aa7.87□□□□□ -1.15
HDAC6-219ENST00000476625 MZT2BQ6NZ67 158 aa7.87□□□□□ -1.15
HDAC6-219ENST00000476625 DAZ4Q86SG3 579 aaKnown RBP7.87□□□□□ -1.15
HDAC6-219ENST00000476625 TMEM75Q8N9X5 138 aa7.87□□□□□ -1.15
HDAC6-219ENST00000476625 C2orf50Q96LR7 162 aa7.87□□□□□ -1.15
HDAC6-219ENST00000476625 SGK494Q96LW2 274 aa7.87□□□□□ -1.15
HDAC6-219ENST00000476625 HYLS1Q96M11 299 aa7.87□□□□□ -1.15
HDAC6-219ENST00000476625 DAZ3Q9NR90 486 aaKnown RBP7.87□□□□□ -1.15
HDAC6-219ENST00000476625 Q9UF83 564 aa7.87□□□□□ -1.15
HDAC6-219ENST00000476625 PLA2G2DQ9UNK4 145 aa7.87□□□□□ -1.15
HDAC6-219ENST00000476625 TRAV8-6A0A0B4J262 113 aa7.86□□□□□ -1.15
HDAC6-219ENST00000476625 M0R2P5 195 aa7.86□□□□□ -1.15
HDAC6-219ENST00000476625 OR7C2O60412 319 aa7.86□□□□□ -1.15
HDAC6-219ENST00000476625 GNG5P63218 68 aa7.86□□□□□ -1.15
HDAC6-219ENST00000476625 SERTAD4-AS1Q5TG53 156 aa7.86□□□□□ -1.15
HDAC6-219ENST00000476625 STX12Q86Y82 276 aa7.86□□□□□ -1.15
HDAC6-219ENST00000476625 CHAC2Q8WUX2 184 aa7.86□□□□□ -1.15
HDAC6-219ENST00000476625 C11orf21Q9P2W6 132 aa7.86□□□□□ -1.15
HDAC6-219ENST00000476625 FBLL1A6NHQ2 334 aaKnown RBP7.85□□□□□ -1.15
HDAC6-219ENST00000476625 SIX6O95475 246 aa7.85□□□□□ -1.15
HDAC6-219ENST00000476625 IGLV2-8P01709 118 aa7.85□□□□□ -1.15
HDAC6-219ENST00000476625 C1QBP02746 253 aa7.85□□□□□ -1.15
HDAC6-219ENST00000476625 TIRAPP58753 221 aa7.85□□□□□ -1.15
HDAC6-219ENST00000476625 UBE2L3P68036 154 aaKnown RBP7.85□□□□□ -1.15
HDAC6-219ENST00000476625 CFAP126Q5VTH2 177 aa7.85□□□□□ -1.15
HDAC6-219ENST00000476625 SYT8Q8NBV8 401 aa7.85□□□□□ -1.15
HDAC6-219ENST00000476625 OR5C1Q8NGR4 320 aa7.85□□□□□ -1.15
HDAC6-219ENST00000476625 OR5AC2Q9NZP5 309 aa7.85□□□□□ -1.15
HDAC6-219ENST00000476625 TRBV7-9A0A0J9YWB2 115 aa7.84□□□□□ -1.15
HDAC6-219ENST00000476625 RBAKDNA6NC62 111 aa7.84□□□□□ -1.15
HDAC6-219ENST00000476625 RS1O15537 224 aa7.84□□□□□ -1.15
HDAC6-219ENST00000476625 UPK1BO75841 260 aa7.84□□□□□ -1.15
HDAC6-219ENST00000476625 PVALBP20472 110 aaPredicted RBP7.84□□□□□ -1.15
HDAC6-219ENST00000476625 CSN1S1P47710 185 aa7.84□□□□□ -1.15
HDAC6-219ENST00000476625 ZNF80P51504 273 aaPredicted RBP7.84□□□□□ -1.15
HDAC6-219ENST00000476625 HBG1P69891 147 aa7.84□□□□□ -1.15
HDAC6-219ENST00000476625 HBG2P69892 147 aa7.84□□□□□ -1.15
HDAC6-219ENST00000476625 TDRG1Q3Y452 100 aa7.84□□□□□ -1.15
HDAC6-219ENST00000476625 LELP1Q5T871 98 aa7.84□□□□□ -1.15
HDAC6-219ENST00000476625 CIRBP-AS1Q8TBR5 109 aa7.84□□□□□ -1.15
HDAC6-219ENST00000476625 NUDT15Q9NV35 164 aa7.84□□□□□ -1.15
HDAC6-219ENST00000476625 GAGE12JA6NER3 117 aa7.83□□□□□ -1.16
HDAC6-219ENST00000476625 PGPEP1LA6NFU8 196 aa7.83□□□□□ -1.16
HDAC6-219ENST00000476625 LYRM1O43325 122 aa7.83□□□□□ -1.16
HDAC6-219ENST00000476625 TCRBP04435 133 aa7.83□□□□□ -1.16
HDAC6-219ENST00000476625 GAGE1Q13065 139 aa7.83□□□□□ -1.16
HDAC6-219ENST00000476625 GAGE4Q13068 117 aa7.83□□□□□ -1.16
HDAC6-219ENST00000476625 GAGE5Q13069 117 aa7.83□□□□□ -1.16
HDAC6-219ENST00000476625 ASAH1Q13510 395 aa7.83□□□□□ -1.16
HDAC6-219ENST00000476625 LRRC37A5PQ49AS3 106 aa7.83□□□□□ -1.16
HDAC6-219ENST00000476625 GAGE13Q4V321 117 aa7.83□□□□□ -1.16
HDAC6-219ENST00000476625 GOLT1AQ6ZVE7 132 aa7.83□□□□□ -1.16
HDAC6-219ENST00000476625 ATP6V0E2Q8NHE4 81 aa7.83□□□□□ -1.16
HDAC6-219ENST00000476625 WDR61Q9GZS3 305 aaKnown RBP7.83□□□□□ -1.16
HDAC6-219ENST00000476625 PGPA6NDG6 321 aa7.82□□□□□ -1.16
HDAC6-219ENST00000476625 H0YIZ8 118 aa7.82□□□□□ -1.16
HDAC6-219ENST00000476625 ATP6V1FQ16864 119 aa7.82□□□□□ -1.16
HDAC6-219ENST00000476625 ZNF876PQ49A33 203 aa7.82□□□□□ -1.16
HDAC6-219ENST00000476625 ZNF506Q5JVG8 444 aa7.82□□□□□ -1.16
HDAC6-219ENST00000476625 SAMD10Q9BYL1 202 aa7.82□□□□□ -1.16
HDAC6-219ENST00000476625 KRTAP3-3Q9BYR6 98 aa7.82□□□□□ -1.16
HDAC6-219ENST00000476625 KRTAP3-2Q9BYR7 98 aa7.82□□□□□ -1.16
HDAC6-219ENST00000476625 GTSF1LQ9H1H1 148 aa7.82□□□□□ -1.16
HDAC6-219ENST00000476625 FAM240BA0A1B0GVZ2 78 aa7.81□□□□□ -1.16
HDAC6-219ENST00000476625 RBFOX3A6NFN3 312 aa7.81□□□□□ -1.16
HDAC6-219ENST00000476625 HMGB3O15347 200 aaKnown RBP7.81□□□□□ -1.16
HDAC6-219ENST00000476625 PFN1P07737 140 aaKnown RBP7.81□□□□□ -1.16
HDAC6-219ENST00000476625 LAGE3Q14657 143 aa7.81□□□□□ -1.16
HDAC6-219ENST00000476625 RHOHQ15669 191 aa7.81□□□□□ -1.16
HDAC6-219ENST00000476625 FFAR4Q5NUL3 377 aa7.81□□□□□ -1.16
HDAC6-219ENST00000476625 SH2D6Q7Z4S9 175 aa7.81□□□□□ -1.16
HDAC6-219ENST00000476625 ASB13Q8WXK3 278 aa7.81□□□□□ -1.16
HDAC6-219ENST00000476625 DAZAP1Q96EP5 407 aaKnown RBP7.81□□□□□ -1.16
HDAC6-219ENST00000476625 PRADC1Q9BSG0 188 aa7.81□□□□□ -1.16
HDAC6-219ENST00000476625 CHAC1Q9BUX1 264 aa7.81□□□□□ -1.16
HDAC6-219ENST00000476625 JPT2Q9H910 190 aa7.81□□□□□ -1.16
HDAC6-219ENST00000476625 SDF2L1Q9HCN8 221 aa7.81□□□□□ -1.16
HDAC6-219ENST00000476625 TREM1Q9NP99 234 aa7.81□□□□□ -1.16
HDAC6-219ENST00000476625 TRAV21A0A0B4J279 112 aa7.8□□□□□ -1.16
HDAC6-219ENST00000476625 OXTP01178 125 aa7.8□□□□□ -1.16
HDAC6-219ENST00000476625 LINC00694P0DN24 101 aa7.8□□□□□ -1.16
HDAC6-219ENST00000476625 C14orf178Q8N769 122 aaPredicted RBP7.8□□□□□ -1.16
HDAC6-219ENST00000476625 ENKURQ8TC29 256 aa7.8□□□□□ -1.16
HDAC6-219ENST00000476625 C9orf85Q96MD7 179 aa7.8□□□□□ -1.16
HDAC6-219ENST00000476625 TM2D2Q9BX73 214 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms