RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 ADAMTSL5Q6ZMM2 481 aa10.61□□□□□ -0.71
NPHP3-ACAD11-201ENST00000471702 HIGD2BQ4VC39 106 aa10.61□□□□□ -0.71
NPHP3-ACAD11-201ENST00000471702 TANC1Q9C0D5 1861 aa10.61□□□□□ -0.71
NPHP3-ACAD11-201ENST00000471702 CRYGSP22914 178 aa10.61□□□□□ -0.71
NPHP3-ACAD11-201ENST00000471702 REG4Q9BYZ8 158 aa10.61□□□□□ -0.71
NPHP3-ACAD11-201ENST00000471702 IGHV4-59P01825 116 aa10.61□□□□□ -0.71
NPHP3-ACAD11-201ENST00000471702 KLHDC3Q9BQ90 382 aa10.61□□□□□ -0.71
NPHP3-ACAD11-201ENST00000471702 LY6G6FQ5SQ64 297 aa10.6□□□□□ -0.71
NPHP3-ACAD11-201ENST00000471702 RNF144BQ7Z419 303 aa10.6□□□□□ -0.71
NPHP3-ACAD11-201ENST00000471702 C3orf22Q8N5N4 141 aa10.6□□□□□ -0.71
NPHP3-ACAD11-201ENST00000471702 IGHV1OR15-1A0A075B7D0 117 aa10.6□□□□□ -0.71
NPHP3-ACAD11-201ENST00000471702 VSIG2Q96IQ7 327 aa10.6□□□□□ -0.71
NPHP3-ACAD11-201ENST00000471702 ORMDL1Q9P0S3 153 aa10.6□□□□□ -0.71
NPHP3-ACAD11-201ENST00000471702 NDUFA12Q9UI09 145 aa10.6□□□□□ -0.71
NPHP3-ACAD11-201ENST00000471702 FGF6P10767 208 aa10.6□□□□□ -0.71
NPHP3-ACAD11-201ENST00000471702 UTF1Q5T230 341 aa10.6□□□□□ -0.71
NPHP3-ACAD11-201ENST00000471702 A0A1B0GUS0 222 aa10.6□□□□□ -0.71
NPHP3-ACAD11-201ENST00000471702 CAMK2N2Q96S95 79 aa10.6□□□□□ -0.71
NPHP3-ACAD11-201ENST00000471702 TRBV20-1A0A075B6N2 111 aa10.6□□□□□ -0.71
NPHP3-ACAD11-201ENST00000471702 SDHAF1A6NFY7 115 aa10.6□□□□□ -0.71
NPHP3-ACAD11-201ENST00000471702 Q6ZS92 163 aa10.6□□□□□ -0.71
NPHP3-ACAD11-201ENST00000471702 HS3ST6Q96QI5 342 aa10.6□□□□□ -0.71
NPHP3-ACAD11-201ENST00000471702 B9D2Q9BPU9 175 aa10.6□□□□□ -0.71
NPHP3-ACAD11-201ENST00000471702 SERP1Q9Y6X1 66 aa10.59□□□□□ -0.71
NPHP3-ACAD11-201ENST00000471702 PLA2G2AP14555 144 aa10.59□□□□□ -0.71
NPHP3-ACAD11-201ENST00000471702 IGHV3-30P01768 117 aa10.59□□□□□ -0.71
NPHP3-ACAD11-201ENST00000471702 IGHV3-33P01772 117 aa10.59□□□□□ -0.71
NPHP3-ACAD11-201ENST00000471702 IGHV3-30-3P0DP02 117 aa10.59□□□□□ -0.71
NPHP3-ACAD11-201ENST00000471702 IGHV3-30-5P0DP03 117 aa10.59□□□□□ -0.71
NPHP3-ACAD11-201ENST00000471702 APRG1Q8IVJ8 170 aa10.59□□□□□ -0.71
NPHP3-ACAD11-201ENST00000471702 RNF5Q99942 180 aa10.59□□□□□ -0.71
NPHP3-ACAD11-201ENST00000471702 NREPQ16612 68 aa10.59□□□□□ -0.71
NPHP3-ACAD11-201ENST00000471702 COL4A1P02462 1669 aa10.59□□□□□ -0.71
NPHP3-ACAD11-201ENST00000471702 C3orf79P0CE67 100 aa10.59□□□□□ -0.71
NPHP3-ACAD11-201ENST00000471702 CRYBA4P53673 196 aa10.59□□□□□ -0.71
NPHP3-ACAD11-201ENST00000471702 C5orf38Q86SI9 138 aa10.59□□□□□ -0.71
NPHP3-ACAD11-201ENST00000471702 SMIM27A0A1W2PRY6 76 aa10.58□□□□□ -0.72
NPHP3-ACAD11-201ENST00000471702 CYTL1Q9NRR1 136 aa10.58□□□□□ -0.72
NPHP3-ACAD11-201ENST00000471702 IGLV3-32A0A0A0MS00 114 aa10.58□□□□□ -0.72
NPHP3-ACAD11-201ENST00000471702 DUX4L9Q6RFH8 374 aaPredicted RBP10.58□□□□□ -0.72
NPHP3-ACAD11-201ENST00000471702 C2orf66Q6UXQ4 117 aa10.58□□□□□ -0.72
NPHP3-ACAD11-201ENST00000471702 IGHV1-24A0A0C4DH33 117 aa10.58□□□□□ -0.72
NPHP3-ACAD11-201ENST00000471702 IGHV2-70DA0A0C4DH43 119 aa10.58□□□□□ -0.72
NPHP3-ACAD11-201ENST00000471702 C15orf62A8K5M9 175 aa10.58□□□□□ -0.72
NPHP3-ACAD11-201ENST00000471702 SPRY2O43597 315 aa10.58□□□□□ -0.72
NPHP3-ACAD11-201ENST00000471702 Q6P435 159 aa10.58□□□□□ -0.72
NPHP3-ACAD11-201ENST00000471702 PIFOQ8TCI5 191 aa10.58□□□□□ -0.72
NPHP3-ACAD11-201ENST00000471702 MYO9AB2RTY4 2548 aa10.57□□□□□ -0.72
NPHP3-ACAD11-201ENST00000471702 BOD1L2Q8IYS8 172 aa10.57□□□□□ -0.72
NPHP3-ACAD11-201ENST00000471702 UBE2D3P61077 147 aa10.57□□□□□ -0.72
NPHP3-ACAD11-201ENST00000471702 FLVCR1-AS1Q8TAF5 88 aa10.57□□□□□ -0.72
NPHP3-ACAD11-201ENST00000471702 SPANXA1Q9NS26 97 aa10.57□□□□□ -0.72
NPHP3-ACAD11-201ENST00000471702 FAM236DA0A1B0GTK5 79 aa10.57□□□□□ -0.72
NPHP3-ACAD11-201ENST00000471702 FAM236CP0DP71 79 aa10.57□□□□□ -0.72
NPHP3-ACAD11-201ENST00000471702 LYPD1Q8N2G4 141 aa10.57□□□□□ -0.72
NPHP3-ACAD11-201ENST00000471702 TSSC4Q9Y5U2 329 aaPredicted RBP10.57□□□□□ -0.72
NPHP3-ACAD11-201ENST00000471702 DEFB4AO15263 64 aa10.56□□□□□ -0.72
NPHP3-ACAD11-201ENST00000471702 IL17DQ8TAD2 202 aa10.56□□□□□ -0.72
NPHP3-ACAD11-201ENST00000471702 COX7B2Q8TF08 81 aa10.56□□□□□ -0.72
NPHP3-ACAD11-201ENST00000471702 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.56□□□□□ -0.72
NPHP3-ACAD11-201ENST00000471702 IGKV2-29A2NJV5 120 aaPredicted RBP10.56□□□□□ -0.72
NPHP3-ACAD11-201ENST00000471702 NDUFS7O75251 213 aa10.56□□□□□ -0.72
NPHP3-ACAD11-201ENST00000471702 FAM120AOSQ5T036 256 aa10.56□□□□□ -0.72
NPHP3-ACAD11-201ENST00000471702 ARTNQ5T4W7 220 aa10.56□□□□□ -0.72
NPHP3-ACAD11-201ENST00000471702 SHANK2-AS3Q9BTD1 123 aa10.56□□□□□ -0.72
NPHP3-ACAD11-201ENST00000471702 Q86TA4 180 aa10.56□□□□□ -0.72
NPHP3-ACAD11-201ENST00000471702 BTCP35070 178 aa10.56□□□□□ -0.72
NPHP3-ACAD11-201ENST00000471702 Q6ZWC4 215 aa10.56□□□□□ -0.72
NPHP3-ACAD11-201ENST00000471702 PFN1P07737 140 aaKnown RBP10.56□□□□□ -0.72
NPHP3-ACAD11-201ENST00000471702 U3KQE9 123 aa10.56□□□□□ -0.72
NPHP3-ACAD11-201ENST00000471702 NRXN2Q9P2S2 1712 aa10.55□□□□□ -0.72
NPHP3-ACAD11-201ENST00000471702 HIST3H2BBQ8N257 126 aa10.55□□□□□ -0.72
NPHP3-ACAD11-201ENST00000471702 NRGNQ92686 78 aa10.55□□□□□ -0.72
NPHP3-ACAD11-201ENST00000471702 C9orf66Q5T8R8 295 aa10.55□□□□□ -0.72
NPHP3-ACAD11-201ENST00000471702 GFI1Q99684 422 aa10.55□□□□□ -0.72
NPHP3-ACAD11-201ENST00000471702 FLG2Q5D862 2391 aaPredicted RBP10.54□□□□□ -0.72
NPHP3-ACAD11-201ENST00000471702 A0A0G2JRQ6 117 aa10.54□□□□□ -0.72
NPHP3-ACAD11-201ENST00000471702 RETNQ9HD89 108 aa10.54□□□□□ -0.72
NPHP3-ACAD11-201ENST00000471702 TPSG1Q9NRR2 321 aa10.54□□□□□ -0.72
NPHP3-ACAD11-201ENST00000471702 UBE2V1Q13404 147 aa10.53□□□□□ -0.72
NPHP3-ACAD11-201ENST00000471702 PYY3Q5JQD4 70 aa10.53□□□□□ -0.72
NPHP3-ACAD11-201ENST00000471702 NLRC5Q86WI3 1866 aa10.53□□□□□ -0.72
NPHP3-ACAD11-201ENST00000471702 TLN2Q9Y4G6 2542 aa10.53□□□□□ -0.72
NPHP3-ACAD11-201ENST00000471702 SLURP1P55000 103 aa10.53□□□□□ -0.72
NPHP3-ACAD11-201ENST00000471702 NMSQ5H8A3 153 aa10.53□□□□□ -0.72
NPHP3-ACAD11-201ENST00000471702 PTPRBP23467 1997 aa10.53□□□□□ -0.72
NPHP3-ACAD11-201ENST00000471702 DEFB112Q30KQ8 113 aa10.53□□□□□ -0.72
NPHP3-ACAD11-201ENST00000471702 X6R8D5 127 aa10.53□□□□□ -0.72
NPHP3-ACAD11-201ENST00000471702 PDE6HQ13956 83 aa10.53□□□□□ -0.72
NPHP3-ACAD11-201ENST00000471702 PLXNA3P51805 1871 aa10.53□□□□□ -0.72
NPHP3-ACAD11-201ENST00000471702 GYPEP15421 78 aa10.52□□□□□ -0.72
NPHP3-ACAD11-201ENST00000471702 PLXNA2O75051 1894 aa10.52□□□□□ -0.72
NPHP3-ACAD11-201ENST00000471702 KIR2DL5BA0A0G2JN68 375 aa10.52□□□□□ -0.72
NPHP3-ACAD11-201ENST00000471702 KIR2DL5BA0A0G2JPC4 375 aa10.52□□□□□ -0.72
NPHP3-ACAD11-201ENST00000471702 GNRH2O43555 120 aa10.52□□□□□ -0.72
NPHP3-ACAD11-201ENST00000471702 TMEM14EPQ6UXP3 125 aa10.52□□□□□ -0.72
NPHP3-ACAD11-201ENST00000471702 KIR2DL5AQ8N109 375 aa10.52□□□□□ -0.72
NPHP3-ACAD11-201ENST00000471702 CYYR1Q96J86 154 aa10.52□□□□□ -0.72
NPHP3-ACAD11-201ENST00000471702 ICOSQ9Y6W8 199 aa10.52□□□□□ -0.72
NPHP3-ACAD11-201ENST00000471702 BAALC-AS2P0C853 105 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms