RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 ANAPC13Q9BS18 74 aa6.19□□□□□ -1.42
TPM3-215ENST00000469717 LOC107984156A0A0G2JMH3 177 aa6.18□□□□□ -1.42
TPM3-215ENST00000469717 PRSS29PA6NIE9 313 aa6.18□□□□□ -1.42
TPM3-215ENST00000469717 C3orf36Q3SXR2 165 aa6.18□□□□□ -1.42
TPM3-215ENST00000469717 SEM1Q6ZVN7 128 aa6.18□□□□□ -1.42
TPM3-215ENST00000469717 ARL17AQ8IVW1 177 aa6.18□□□□□ -1.42
TPM3-215ENST00000469717 TTC9CQ8N5M4 171 aa6.18□□□□□ -1.42
TPM3-215ENST00000469717 SHANK2-AS3Q9BTD1 123 aa6.18□□□□□ -1.42
TPM3-215ENST00000469717 VPREB3Q9UKI3 123 aa6.18□□□□□ -1.42
TPM3-215ENST00000469717 I3L2K1 104 aa6.18□□□□□ -1.42
TPM3-215ENST00000469717 COX7A1P24310 79 aa6.18□□□□□ -1.42
TPM3-215ENST00000469717 ERCC8Q13216 396 aa6.18□□□□□ -1.42
TPM3-215ENST00000469717 ZNF474Q6S9Z5 364 aaPredicted RBP6.18□□□□□ -1.42
TPM3-215ENST00000469717 Q6ZUT4 128 aa6.18□□□□□ -1.42
TPM3-215ENST00000469717 ZNF491Q8N8L2 437 aa6.18□□□□□ -1.42
TPM3-215ENST00000469717 FAM57AQ8TBR7 257 aa6.18□□□□□ -1.42
TPM3-215ENST00000469717 TMEM14CQ9P0S9 112 aa6.18□□□□□ -1.42
TPM3-215ENST00000469717 SIGLEC9Q9Y336 463 aa6.18□□□□□ -1.42
TPM3-215ENST00000469717 BSNQ9UPA5 3926 aa6.18□□□□□ -1.42
TPM3-215ENST00000469717 CUBNO60494 3623 aa6.18□□□□□ -1.42
TPM3-215ENST00000469717 MRPS12O15235 138 aaKnown RBP6.18□□□□□ -1.42
TPM3-215ENST00000469717 HLA-DRB4P13762 266 aa6.18□□□□□ -1.42
TPM3-215ENST00000469717 GLRXP35754 106 aa6.18□□□□□ -1.42
TPM3-215ENST00000469717 PSMB2P49721 201 aa6.18□□□□□ -1.42
TPM3-215ENST00000469717 Q6ZS92 163 aa6.18□□□□□ -1.42
TPM3-215ENST00000469717 TIMD4Q96H15 378 aa6.18□□□□□ -1.42
TPM3-215ENST00000469717 HLA-DRB4X5D2U9 266 aa6.18□□□□□ -1.42
TPM3-215ENST00000469717 H3BRN7 92 aa6.17□□□□□ -1.42
TPM3-215ENST00000469717 Q6AWC8 147 aa6.17□□□□□ -1.42
TPM3-215ENST00000469717 RNF125Q96EQ8 232 aa6.17□□□□□ -1.42
TPM3-215ENST00000469717 CARD19Q96LW7 228 aa6.17□□□□□ -1.42
TPM3-215ENST00000469717 TRBV7-3A0A075B6L6 115 aa6.17□□□□□ -1.42
TPM3-215ENST00000469717 LINC01549A6NIU2 74 aa6.17□□□□□ -1.42
TPM3-215ENST00000469717 K7EIM0 57 aa6.17□□□□□ -1.42
TPM3-215ENST00000469717 BSPH1Q075Z2 132 aa6.17□□□□□ -1.42
TPM3-215ENST00000469717 ZNF502Q8TBZ5 544 aa6.17□□□□□ -1.42
TPM3-215ENST00000469717 PRR25Q96S07 402 aa6.17□□□□□ -1.42
TPM3-215ENST00000469717 F8WDY8 70 aa6.17□□□□□ -1.42
TPM3-215ENST00000469717 CFAP126Q5VTH2 177 aa6.17□□□□□ -1.42
TPM3-215ENST00000469717 DTX2Q86UW9 622 aa6.17□□□□□ -1.42
TPM3-215ENST00000469717 C1QTNF4Q9BXJ3 329 aa6.17□□□□□ -1.42
TPM3-215ENST00000469717 IGLV3-9A0A075B6K5 115 aa6.16□□□□□ -1.42
TPM3-215ENST00000469717 PPP1R27Q86WC6 154 aa6.16□□□□□ -1.42
TPM3-215ENST00000469717 PRAC2D3DTV9 90 aa6.16□□□□□ -1.42
TPM3-215ENST00000469717 IGLC6P0CF74 106 aa6.16□□□□□ -1.42
TPM3-215ENST00000469717 GATA4P43694 442 aa6.16□□□□□ -1.42
TPM3-215ENST00000469717 PLEKHB2Q96CS7 222 aa6.16□□□□□ -1.42
TPM3-215ENST00000469717 CEACAM4O75871 244 aa6.16□□□□□ -1.42
TPM3-215ENST00000469717 SPANXA1Q9NS26 97 aa6.16□□□□□ -1.42
TPM3-215ENST00000469717 IGHV3OR16-13A0A075B7E8 117 aa6.15□□□□□ -1.42
TPM3-215ENST00000469717 IGHV3-74A0A0B4J1X5 117 aa6.15□□□□□ -1.42
TPM3-215ENST00000469717 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.15□□□□□ -1.42
TPM3-215ENST00000469717 EMP1P54849 157 aa6.15□□□□□ -1.42
TPM3-215ENST00000469717 RNF182Q8N6D2 247 aa6.15□□□□□ -1.42
TPM3-215ENST00000469717 KLHL30-AS1Q8NEE0 82 aa6.15□□□□□ -1.42
TPM3-215ENST00000469717 PIFOQ8TCI5 191 aa6.15□□□□□ -1.42
TPM3-215ENST00000469717 AAMDCQ9H7C9 122 aa6.15□□□□□ -1.42
TPM3-215ENST00000469717 IGLV2-18A0A075B6J9 118 aa6.15□□□□□ -1.42
TPM3-215ENST00000469717 IGHV3OR16-10A0A075B7F0 116 aa6.15□□□□□ -1.42
TPM3-215ENST00000469717 A0A0G2JNJ9 132 aa6.15□□□□□ -1.42
TPM3-215ENST00000469717 H3BVH4 76 aa6.15□□□□□ -1.42
TPM3-215ENST00000469717 PVRIGQ6DKI7 326 aa6.15□□□□□ -1.42
TPM3-215ENST00000469717 RPEQ96AT9 228 aa6.15□□□□□ -1.42
TPM3-215ENST00000469717 C11orf21Q9P2W6 132 aa6.15□□□□□ -1.42
TPM3-215ENST00000469717 Q9UFV3 132 aa6.15□□□□□ -1.42
TPM3-215ENST00000469717 CSDC2Q9Y534 153 aaKnown RBP6.15□□□□□ -1.42
TPM3-215ENST00000469717 IGHV3-66A0A0C4DH42 116 aa6.15□□□□□ -1.43
TPM3-215ENST00000469717 TRBV6-1A0A0K0K1D8 114 aa6.15□□□□□ -1.43
TPM3-215ENST00000469717 TNFRSF13BO14836 293 aaPredicted RBP6.15□□□□□ -1.43
TPM3-215ENST00000469717 IGHG4P01861 327 aa6.15□□□□□ -1.43
TPM3-215ENST00000469717 LOXP28300 417 aaPredicted RBP6.15□□□□□ -1.43
TPM3-215ENST00000469717 GRNP28799 593 aaKnown RBP6.15□□□□□ -1.43
TPM3-215ENST00000469717 SRSF1Q07955 248 aaKnown RBP eCLIP6.15□□□□□ -1.432e-7■□□□□ 8.7
TPM3-215ENST00000469717 CFHR4Q92496 578 aa6.15□□□□□ -1.43
TPM3-215ENST00000469717 CFAP46Q8IYW2 2715 aa6.15□□□□□ -1.43
TPM3-215ENST00000469717 HELZ2Q9BYK8 2649 aaKnown RBP6.15□□□□□ -1.43
TPM3-215ENST00000469717 COX6B1P14854 86 aa6.15□□□□□ -1.43
TPM3-215ENST00000469717 DUX5Q96PT3 197 aa6.15□□□□□ -1.43
TPM3-215ENST00000469717 VKORC1Q9BQB6 163 aa6.15□□□□□ -1.43
TPM3-215ENST00000469717 PRRC2AP48634 2157 aaKnown RBP6.14□□□□□ -1.43
TPM3-215ENST00000469717 HOXA3O43365 443 aaPredicted RBP6.14□□□□□ -1.43
TPM3-215ENST00000469717 LGALS1P09382 135 aaKnown RBP6.14□□□□□ -1.43
TPM3-215ENST00000469717 KLRD1Q13241 179 aa6.14□□□□□ -1.43
TPM3-215ENST00000469717 KHDC1LQ5JSQ8 128 aa6.14□□□□□ -1.43
TPM3-215ENST00000469717 TEX36Q5VZQ5 186 aa6.14□□□□□ -1.43
TPM3-215ENST00000469717 DYNAPQ8N1N2 210 aa6.14□□□□□ -1.43
TPM3-215ENST00000469717 TRBV20-1A0A075B6N2 111 aa6.14□□□□□ -1.43
TPM3-215ENST00000469717 IGHG3P01860 377 aa6.14□□□□□ -1.43
TPM3-215ENST00000469717 CRYGBP07316 175 aa6.14□□□□□ -1.43
TPM3-215ENST00000469717 IGHV1-8P0DP01 117 aa6.14□□□□□ -1.43
TPM3-215ENST00000469717 IL17RELQ6ZVW7 336 aa6.14□□□□□ -1.43
TPM3-215ENST00000469717 PSMG3-AS1Q96PY0 264 aa6.14□□□□□ -1.43
TPM3-215ENST00000469717 NCBP2LA6PVI3 153 aaKnown RBP6.14□□□□□ -1.43
TPM3-215ENST00000469717 CD40P25942 277 aa6.14□□□□□ -1.43
TPM3-215ENST00000469717 NXT2Q9NPJ8 142 aaKnown RBP6.14□□□□□ -1.43
TPM3-215ENST00000469717 NDUFB3O43676 98 aa6.13□□□□□ -1.43
TPM3-215ENST00000469717 MYOZ3Q8TDC0 251 aa6.13□□□□□ -1.43
TPM3-215ENST00000469717 AJUBAQ96IF1 538 aa6.13□□□□□ -1.43
TPM3-215ENST00000469717 PPDPFQ9H3Y8 114 aa6.13□□□□□ -1.43
TPM3-215ENST00000469717 CHD6Q8TD26 2715 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms