RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 BCAP31P51572 246 aa11.13□□□□□ -0.63
UBE2D4-209ENST00000454428 OR51M1Q9H341 326 aa11.13□□□□□ -0.63
UBE2D4-209ENST00000454428 LSM5Q9Y4Y9 91 aaKnown RBP11.13□□□□□ -0.63
UBE2D4-209ENST00000454428 IGSF23A1L1A6 192 aa11.12□□□□□ -0.63
UBE2D4-209ENST00000454428 L7N2F9 121 aa11.12□□□□□ -0.63
UBE2D4-209ENST00000454428 CCSO14618 274 aa11.12□□□□□ -0.63
UBE2D4-209ENST00000454428 LINC00694P0DN24 101 aa11.12□□□□□ -0.63
UBE2D4-209ENST00000454428 FGF7P21781 194 aa11.12□□□□□ -0.63
UBE2D4-209ENST00000454428 VAMP2P63027 116 aa11.12□□□□□ -0.63
UBE2D4-209ENST00000454428 MITD1Q8WV92 249 aa11.12□□□□□ -0.63
UBE2D4-209ENST00000454428 LENEPQ9Y5L5 61 aa11.12□□□□□ -0.63
UBE2D4-209ENST00000454428 DIRC3C9JPN6 131 aa11.11□□□□□ -0.63
UBE2D4-209ENST00000454428 NPCDR1Q9BY65 106 aa11.11□□□□□ -0.63
UBE2D4-209ENST00000454428 COX11Q9Y6N1 276 aa11.11□□□□□ -0.63
UBE2D4-209ENST00000454428 C5orf51A6NDU8 294 aa11.1□□□□□ -0.63
UBE2D4-209ENST00000454428 GGTLC3B5MD39 225 aa11.1□□□□□ -0.63
UBE2D4-209ENST00000454428 S100A11P31949 105 aa11.1□□□□□ -0.63
UBE2D4-209ENST00000454428 ASIPP42127 132 aa11.1□□□□□ -0.63
UBE2D4-209ENST00000454428 SULT1A1P50225 295 aa11.1□□□□□ -0.63
UBE2D4-209ENST00000454428 TMBIM6P55061 237 aa11.1□□□□□ -0.63
UBE2D4-209ENST00000454428 RANP62826 216 aaKnown RBP11.1□□□□□ -0.63
UBE2D4-209ENST00000454428 ZNF876PQ49A33 203 aa11.1□□□□□ -0.63
UBE2D4-209ENST00000454428 TOR2AQ5JU69 321 aa11.1□□□□□ -0.63
UBE2D4-209ENST00000454428 TVP23CQ96ET8 276 aa11.1□□□□□ -0.63
UBE2D4-209ENST00000454428 PAXXQ9BUH6 204 aa11.1□□□□□ -0.63
UBE2D4-209ENST00000454428 MRPS26Q9BYN8 205 aaKnown RBP11.1□□□□□ -0.63
UBE2D4-209ENST00000454428 Q9UF83 564 aa11.1□□□□□ -0.63
UBE2D4-209ENST00000454428 H3BMQ9 156 aa11.09□□□□□ -0.63
UBE2D4-209ENST00000454428 BTCP35070 178 aa11.09□□□□□ -0.63
UBE2D4-209ENST00000454428 BCL7BQ9BQE9 202 aa11.09□□□□□ -0.63
UBE2D4-209ENST00000454428 IGKV2D-24A0A075B6R9 120 aa11.08□□□□□ -0.64
UBE2D4-209ENST00000454428 CIDEAO60543 219 aa11.08□□□□□ -0.64
UBE2D4-209ENST00000454428 CSN1S1P47710 185 aa11.08□□□□□ -0.64
UBE2D4-209ENST00000454428 TMEM252Q8N6L7 170 aa11.08□□□□□ -0.64
UBE2D4-209ENST00000454428 TMED6Q8WW62 240 aa11.08□□□□□ -0.64
UBE2D4-209ENST00000454428 LYRM2Q9NU23 88 aaPredicted RBP11.08□□□□□ -0.64
UBE2D4-209ENST00000454428 F6UZH7 168 aa11.07□□□□□ -0.64
UBE2D4-209ENST00000454428 INPP1P49441 399 aa11.07□□□□□ -0.64
UBE2D4-209ENST00000454428 Q6ZRU5 148 aa11.07□□□□□ -0.64
UBE2D4-209ENST00000454428 SDF2L1Q9HCN8 221 aa11.07□□□□□ -0.64
UBE2D4-209ENST00000454428 RPH3ALQ9UNE2 315 aa11.07□□□□□ -0.64
UBE2D4-209ENST00000454428 LPAP08519 4548 aa11.07□□□□□ -0.64
UBE2D4-209ENST00000454428 TRAV8-1A0A0A6YYK1 113 aa11.06□□□□□ -0.64
UBE2D4-209ENST00000454428 TRAV21A0A0B4J279 112 aa11.06□□□□□ -0.64
UBE2D4-209ENST00000454428 PANO1I0J062 215 aa11.06□□□□□ -0.64
UBE2D4-209ENST00000454428 MGST1P10620 155 aaKnown RBP11.06□□□□□ -0.64
UBE2D4-209ENST00000454428 RMI2Q96E14 147 aa11.06□□□□□ -0.64
UBE2D4-209ENST00000454428 C11orf21Q9P2W6 132 aa11.06□□□□□ -0.64
UBE2D4-209ENST00000454428 GAGE12JA6NER3 117 aa11.05□□□□□ -0.64
UBE2D4-209ENST00000454428 NAP1L6A6NFF2 107 aa11.05□□□□□ -0.64
UBE2D4-209ENST00000454428 PGPEP1LA6NFU8 196 aa11.05□□□□□ -0.64
UBE2D4-209ENST00000454428 GAGE1Q13065 139 aa11.05□□□□□ -0.64
UBE2D4-209ENST00000454428 GAGE4Q13068 117 aa11.05□□□□□ -0.64
UBE2D4-209ENST00000454428 GAGE5Q13069 117 aa11.05□□□□□ -0.64
UBE2D4-209ENST00000454428 GAGE13Q4V321 117 aa11.05□□□□□ -0.64
UBE2D4-209ENST00000454428 ATRAIDQ6UW56 229 aa11.05□□□□□ -0.64
UBE2D4-209ENST00000454428 THAP6Q8TBB0 222 aa11.05□□□□□ -0.64
UBE2D4-209ENST00000454428 ASB13Q8WXK3 278 aa11.05□□□□□ -0.64
UBE2D4-209ENST00000454428 C9orf85Q96MD7 179 aa11.05□□□□□ -0.64
UBE2D4-209ENST00000454428 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.05□□□□□ -0.64
UBE2D4-209ENST00000454428 HBG1P69891 147 aa11.04□□□□□ -0.64
UBE2D4-209ENST00000454428 HBG2P69892 147 aa11.04□□□□□ -0.64
UBE2D4-209ENST00000454428 IL15RAQ13261 267 aa11.04□□□□□ -0.64
UBE2D4-209ENST00000454428 ODF1Q14990 250 aa11.04□□□□□ -0.64
UBE2D4-209ENST00000454428 ATP6V1FQ16864 119 aa11.04□□□□□ -0.64
UBE2D4-209ENST00000454428 ZNF506Q5JVG8 444 aa11.04□□□□□ -0.64
UBE2D4-209ENST00000454428 NIT1Q86X76 327 aa11.04□□□□□ -0.64
UBE2D4-209ENST00000454428 KCNS1Q96KK3 526 aa11.04□□□□□ -0.64
UBE2D4-209ENST00000454428 KLK12Q9UKR0 248 aa11.04□□□□□ -0.64
UBE2D4-209ENST00000454428 FAM25EA8MYX2 175 aa11.03□□□□□ -0.64
UBE2D4-209ENST00000454428 OR7C2O60412 319 aa11.03□□□□□ -0.64
UBE2D4-209ENST00000454428 SPANXN2Q5MJ10 180 aa11.03□□□□□ -0.64
UBE2D4-209ENST00000454428 STX12Q86Y82 276 aa11.03□□□□□ -0.64
UBE2D4-209ENST00000454428 CYB561D1Q8N8Q1 229 aa11.03□□□□□ -0.64
UBE2D4-209ENST00000454428 PTH2Q96A98 100 aa11.03□□□□□ -0.64
UBE2D4-209ENST00000454428 HYLS1Q96M11 299 aa11.03□□□□□ -0.64
UBE2D4-209ENST00000454428 ATP5SQ99766 215 aa11.03□□□□□ -0.64
UBE2D4-209ENST00000454428 UBE2WQ96B02 151 aa11.02□□□□□ -0.65
UBE2D4-209ENST00000454428 SAMD10Q9BYL1 202 aa11.02□□□□□ -0.65
UBE2D4-209ENST00000454428 A0A087WWC5 75 aa11.01□□□□□ -0.65
UBE2D4-209ENST00000454428 RNASE3P12724 160 aaKnown RBP11.01□□□□□ -0.65
UBE2D4-209ENST00000454428 PVALBP20472 110 aaPredicted RBP11.01□□□□□ -0.65
UBE2D4-209ENST00000454428 ZNF80P51504 273 aaPredicted RBP11.01□□□□□ -0.65
UBE2D4-209ENST00000454428 S100A10P60903 97 aa11.01□□□□□ -0.65
UBE2D4-209ENST00000454428 UBE2L3P68036 154 aaKnown RBP11.01□□□□□ -0.65
UBE2D4-209ENST00000454428 NHLH2Q02577 135 aa11.01□□□□□ -0.65
UBE2D4-209ENST00000454428 RAB32Q13637 225 aa11.01□□□□□ -0.65
UBE2D4-209ENST00000454428 C2orf50Q96LR7 162 aa11.01□□□□□ -0.65
UBE2D4-209ENST00000454428 LINC00479Q96M42 142 aa11.01□□□□□ -0.65
UBE2D4-209ENST00000454428 PARLQ9H300 379 aa11.01□□□□□ -0.65
UBE2D4-209ENST00000454428 TREM1Q9NP99 234 aa11.01□□□□□ -0.65
UBE2D4-209ENST00000454428 UFSP1Q6NVU6 142 aa11□□□□□ -0.65
UBE2D4-209ENST00000454428 GOLT1AQ6ZVE7 132 aa11□□□□□ -0.65
UBE2D4-209ENST00000454428 C14orf178Q8N769 122 aaPredicted RBP11□□□□□ -0.65
UBE2D4-209ENST00000454428 TMEM75Q8N9X5 138 aa11□□□□□ -0.65
UBE2D4-209ENST00000454428 SDHCQ99643 169 aaPredicted RBP11□□□□□ -0.65
UBE2D4-209ENST00000454428 SH3BGRL3Q9H299 93 aa11□□□□□ -0.65
UBE2D4-209ENST00000454428 OTORQ9NRC9 128 aa11□□□□□ -0.65
UBE2D4-209ENST00000454428 EIF3GO75821 320 aaKnown RBP eCLIP10.99□□□□□ -0.65
UBE2D4-209ENST00000454428 OR2T35Q8NGX2 323 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms