RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 FSCN3Q9NQT6 498 aa8.24□□□□□ -1.09
LINC00342-202ENST00000448494 LILRA5A6NI73 299 aa8.23□□□□□ -1.09
LINC00342-202ENST00000448494 MSRB1Q9NZV6 116 aa8.23□□□□□ -1.09
LINC00342-202ENST00000448494 MRPL36Q9P0J6 103 aaKnown RBP8.23□□□□□ -1.09
LINC00342-202ENST00000448494 TP53TG1Q9Y2A0 90 aa8.23□□□□□ -1.09
LINC00342-202ENST00000448494 SERP1Q9Y6X1 66 aa8.23□□□□□ -1.09
LINC00342-202ENST00000448494 ZNHIT1O43257 154 aa8.22□□□□□ -1.09
LINC00342-202ENST00000448494 SAA2P0DJI9 122 aaPredicted RBP8.22□□□□□ -1.09
LINC00342-202ENST00000448494 EGR2P11161 476 aaPredicted RBP8.22□□□□□ -1.09
LINC00342-202ENST00000448494 FAM27E3Q08E93 113 aa8.22□□□□□ -1.09
LINC00342-202ENST00000448494 ERCC8Q13216 396 aa8.22□□□□□ -1.09
LINC00342-202ENST00000448494 PRSS33Q8NF86 280 aa8.22□□□□□ -1.09
LINC00342-202ENST00000448494 DCANP1Q8TF63 244 aa8.22□□□□□ -1.09
LINC00342-202ENST00000448494 SIRPDQ9H106 197 aa8.22□□□□□ -1.09
LINC00342-202ENST00000448494 DKK4Q9UBT3 224 aa8.22□□□□□ -1.09
LINC00342-202ENST00000448494 ICOSQ9Y6W8 199 aa8.22□□□□□ -1.09
LINC00342-202ENST00000448494 BRWD1Q9NSI6 2320 aa8.22□□□□□ -1.09
LINC00342-202ENST00000448494 TMEM200BQ69YZ2 307 aa8.22□□□□□ -1.09
LINC00342-202ENST00000448494 DCTN5Q9BTE1 182 aa8.22□□□□□ -1.09
LINC00342-202ENST00000448494 BEX4Q9NWD9 120 aaPredicted RBP8.22□□□□□ -1.09
LINC00342-202ENST00000448494 FAM216BQ8N7L0 139 aa8.21□□□□□ -1.09
LINC00342-202ENST00000448494 SAP25Q8TEE9 199 aa8.21□□□□□ -1.09
LINC00342-202ENST00000448494 AMELXQ99217 191 aa8.21□□□□□ -1.09
LINC00342-202ENST00000448494 A0A096LPE4 126 aa8.21□□□□□ -1.1
LINC00342-202ENST00000448494 A0A1W2PPC4 97 aa8.21□□□□□ -1.1
LINC00342-202ENST00000448494 A0A1W2PPZ6 126 aa8.21□□□□□ -1.1
LINC00342-202ENST00000448494 TMEM178BH3BS89 294 aa8.21□□□□□ -1.1
LINC00342-202ENST00000448494 GRPP07492 148 aa8.21□□□□□ -1.1
LINC00342-202ENST00000448494 SAA1P0DJI8 122 aaPredicted RBP8.21□□□□□ -1.1
LINC00342-202ENST00000448494 SYNJ2BPP57105 145 aa8.21□□□□□ -1.1
LINC00342-202ENST00000448494 DAND5Q8N907 189 aa8.21□□□□□ -1.1
LINC00342-202ENST00000448494 EEF1AKMT3Q96AZ1 226 aa8.21□□□□□ -1.1
LINC00342-202ENST00000448494 MED12Q93074 2177 aa8.21□□□□□ -1.1
LINC00342-202ENST00000448494 WNT9BO14905 357 aa8.2□□□□□ -1.1
LINC00342-202ENST00000448494 SMIM2Q9BVW6 85 aa8.2□□□□□ -1.1
LINC00342-202ENST00000448494 SCNM1Q9BWG6 230 aa8.2□□□□□ -1.1
LINC00342-202ENST00000448494 C11orf86A6NJI1 115 aa8.2□□□□□ -1.1
LINC00342-202ENST00000448494 RHOHQ15669 191 aa8.2□□□□□ -1.1
LINC00342-202ENST00000448494 MUSTN1Q8IVN3 82 aa8.2□□□□□ -1.1
LINC00342-202ENST00000448494 MDS2Q8NDY4 140 aa8.2□□□□□ -1.1
LINC00342-202ENST00000448494 TIMM21Q9BVV7 248 aa8.2□□□□□ -1.1
LINC00342-202ENST00000448494 C16orf95Q9H693 158 aa8.2□□□□□ -1.1
LINC00342-202ENST00000448494 IGLV3-12A0A075B6K2 115 aa8.19□□□□□ -1.1
LINC00342-202ENST00000448494 ZNF503-AS2A6NEH8 195 aa8.19□□□□□ -1.1
LINC00342-202ENST00000448494 WT1-ASQ06250 92 aa8.19□□□□□ -1.1
LINC00342-202ENST00000448494 PVRIGQ6DKI7 326 aa8.19□□□□□ -1.1
LINC00342-202ENST00000448494 C14orf178Q8N769 122 aaPredicted RBP8.19□□□□□ -1.1
LINC00342-202ENST00000448494 PSMG3-AS1Q96PY0 264 aa8.19□□□□□ -1.1
LINC00342-202ENST00000448494 CXCL13O43927 109 aa8.19□□□□□ -1.1
LINC00342-202ENST00000448494 IGHV3-48P01763 117 aa8.19□□□□□ -1.1
LINC00342-202ENST00000448494 LGALS3P17931 250 aaKnown RBP8.19□□□□□ -1.1
LINC00342-202ENST00000448494 TSPEAR-AS2P59090 65 aa8.19□□□□□ -1.1
LINC00342-202ENST00000448494 NSUN5P1Q3KNT7 163 aa8.19□□□□□ -1.1
LINC00342-202ENST00000448494 GGNQ86UU5 652 aa8.19□□□□□ -1.1
LINC00342-202ENST00000448494 M0R3E3 92 aa8.18□□□□□ -1.1
LINC00342-202ENST00000448494 MRPL33O75394 65 aaKnown RBP8.18□□□□□ -1.1
LINC00342-202ENST00000448494 IGHV3-9P01782 118 aa8.18□□□□□ -1.1
LINC00342-202ENST00000448494 ZNF575Q86XF7 245 aa8.18□□□□□ -1.1
LINC00342-202ENST00000448494 INTS1Q8N201 2190 aaKnown RBP8.18□□□□□ -1.1
LINC00342-202ENST00000448494 IGLV4-69A0A075B6H9 119 aa8.18□□□□□ -1.1
LINC00342-202ENST00000448494 SMIM26A0A096LP01 95 aa8.18□□□□□ -1.1
LINC00342-202ENST00000448494 C5orf67F2Z3F1 127 aa8.18□□□□□ -1.1
LINC00342-202ENST00000448494 B3GALT5-AS1P59052 145 aa8.18□□□□□ -1.1
LINC00342-202ENST00000448494 DEFB126Q9BYW3 111 aa8.18□□□□□ -1.1
LINC00342-202ENST00000448494 A0A0J9YX75 114 aa8.17□□□□□ -1.1
LINC00342-202ENST00000448494 IGKV1-16P04430 117 aa8.17□□□□□ -1.1
LINC00342-202ENST00000448494 UBE2E1P51965 193 aa8.17□□□□□ -1.1
LINC00342-202ENST00000448494 FAM201AQ5SY85 155 aa8.17□□□□□ -1.1
LINC00342-202ENST00000448494 LINC01561Q8N1V8 128 aa8.17□□□□□ -1.1
LINC00342-202ENST00000448494 TECTAO75443 2155 aa8.17□□□□□ -1.1
LINC00342-202ENST00000448494 SPRY2O43597 315 aa8.17□□□□□ -1.1
LINC00342-202ENST00000448494 TFF1P04155 84 aa8.17□□□□□ -1.1
LINC00342-202ENST00000448494 NBL1P41271 181 aa8.17□□□□□ -1.1
LINC00342-202ENST00000448494 LYZP61626 148 aa8.17□□□□□ -1.1
LINC00342-202ENST00000448494 PDE6HQ13956 83 aa8.17□□□□□ -1.1
LINC00342-202ENST00000448494 VMA21Q3ZAQ7 101 aa8.17□□□□□ -1.1
LINC00342-202ENST00000448494 C2orf66Q6UXQ4 117 aa8.17□□□□□ -1.1
LINC00342-202ENST00000448494 C16orf92Q96LL3 132 aa8.17□□□□□ -1.1
LINC00342-202ENST00000448494 IGKV3D-15A0A087WSY6 115 aa8.16□□□□□ -1.1
LINC00342-202ENST00000448494 SPTY2D1-AS1A0A0U1RR47 76 aa8.16□□□□□ -1.1
LINC00342-202ENST00000448494 IQCF6A8MYZ5 107 aa8.16□□□□□ -1.1
LINC00342-202ENST00000448494 AVPP01185 164 aa8.16□□□□□ -1.1
LINC00342-202ENST00000448494 CD177Q8N6Q3 437 aa8.16□□□□□ -1.1
LINC00342-202ENST00000448494 TMEM167AQ8TBQ9 72 aa8.16□□□□□ -1.1
LINC00342-202ENST00000448494 KLK15Q9H2R5 256 aa8.16□□□□□ -1.1
LINC00342-202ENST00000448494 SEC16AO15027 2179 aa8.16□□□□□ -1.1
LINC00342-202ENST00000448494 A0A1W2PRX2 142 aa8.15□□□□□ -1.1
LINC00342-202ENST00000448494 SDHAF1A6NFY7 115 aa8.15□□□□□ -1.1
LINC00342-202ENST00000448494 CGB1A6NKQ9 187 aa8.15□□□□□ -1.1
LINC00342-202ENST00000448494 E7EUB6 86 aa8.15□□□□□ -1.1
LINC00342-202ENST00000448494 BUB3O43684 328 aa8.15□□□□□ -1.1
LINC00342-202ENST00000448494 DLX1P56177 255 aa8.15□□□□□ -1.1
LINC00342-202ENST00000448494 FHL2Q14192 279 aa8.15□□□□□ -1.1
LINC00342-202ENST00000448494 SLC25A45Q8N413 288 aa8.15□□□□□ -1.1
LINC00342-202ENST00000448494 CLEC2BQ92478 149 aa8.15□□□□□ -1.1
LINC00342-202ENST00000448494 C17orf77Q96MU5 243 aa8.15□□□□□ -1.1
LINC00342-202ENST00000448494 IGHV3-64DA0A0J9YX35 117 aa8.15□□□□□ -1.1
LINC00342-202ENST00000448494 MRPS36P82909 103 aaKnown RBP8.15□□□□□ -1.1
LINC00342-202ENST00000448494 ZNF826PQ6ZT77 177 aa8.15□□□□□ -1.1
LINC00342-202ENST00000448494 C9orf139Q6ZV77 190 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 143.3 ms