RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 IGKV1-5P01602 117 aa2.21□□□□□ -2.06
LIG4-203ENST00000442234 LGALS1P09382 135 aaKnown RBP2.21□□□□□ -2.06
LIG4-203ENST00000442234 FAM90A24PP0C7X0 464 aa2.21□□□□□ -2.06
LIG4-203ENST00000442234 COX7CP15954 63 aa2.21□□□□□ -2.06
LIG4-203ENST00000442234 CNTFRP26992 372 aa2.21□□□□□ -2.06
LIG4-203ENST00000442234 ZNF441Q8N8Z8 693 aa2.21□□□□□ -2.06
LIG4-203ENST00000442234 NPIPB3Q92617 1050 aa2.21□□□□□ -2.06
LIG4-203ENST00000442234 ZNF799Q96GE5 643 aa2.21□□□□□ -2.06
LIG4-203ENST00000442234 IFI27L2Q9H2X8 130 aa2.21□□□□□ -2.06
LIG4-203ENST00000442234 ARHGAP32A7KAX9 2087 aa2.21□□□□□ -2.06
LIG4-203ENST00000442234 COL4A2P08572 1712 aa2.21□□□□□ -2.06
LIG4-203ENST00000442234 IGKV2D-26A0A0A0MRZ7 120 aa2.21□□□□□ -2.06
LIG4-203ENST00000442234 ZNF815PA8K554 130 aa2.21□□□□□ -2.06
LIG4-203ENST00000442234 ATOX1O00244 68 aa2.21□□□□□ -2.06
LIG4-203ENST00000442234 TIMM23O14925 209 aa2.21□□□□□ -2.06
LIG4-203ENST00000442234 IGKV1D-16P01601 117 aa2.21□□□□□ -2.06
LIG4-203ENST00000442234 C8orf88P0DMB2 117 aa2.21□□□□□ -2.06
LIG4-203ENST00000442234 CCL3P10147 92 aa2.21□□□□□ -2.06
LIG4-203ENST00000442234 HLA-DRB4P13762 266 aa2.21□□□□□ -2.06
LIG4-203ENST00000442234 NPC2P61916 151 aa2.21□□□□□ -2.06
LIG4-203ENST00000442234 FAM231DQ6ZW35 169 aa2.21□□□□□ -2.06
LIG4-203ENST00000442234 ORMDL3Q8N138 153 aa2.21□□□□□ -2.06
LIG4-203ENST00000442234 DRAM1Q8N682 238 aa2.21□□□□□ -2.06
LIG4-203ENST00000442234 NUP37Q8NFH4 326 aa2.21□□□□□ -2.06
LIG4-203ENST00000442234 IL17DQ8TAD2 202 aa2.21□□□□□ -2.06
LIG4-203ENST00000442234 VKORC1Q9BQB6 163 aa2.21□□□□□ -2.06
LIG4-203ENST00000442234 PYGO1Q9Y3Y4 419 aa2.21□□□□□ -2.06
LIG4-203ENST00000442234 HLA-DRB4X5D2U9 266 aa2.21□□□□□ -2.06
LIG4-203ENST00000442234 MALRD1Q5VYJ5 2156 aa2.21□□□□□ -2.06
LIG4-203ENST00000442234 DSCAMO60469 2012 aa2.21□□□□□ -2.06
LIG4-203ENST00000442234 TRAV40A0A0B4J280 105 aa2.2□□□□□ -2.06
LIG4-203ENST00000442234 TEX49A0A1B0GTD5 131 aa2.2□□□□□ -2.06
LIG4-203ENST00000442234 LIPT2A6NK58 231 aa2.2□□□□□ -2.06
LIG4-203ENST00000442234 J3QQQ9 107 aa2.2□□□□□ -2.06
LIG4-203ENST00000442234 OVOL1O14753 267 aa2.2□□□□□ -2.06
LIG4-203ENST00000442234 COX7A2P2O60397 106 aa2.2□□□□□ -2.06
LIG4-203ENST00000442234 ATP5G1P05496 136 aa2.2□□□□□ -2.06
LIG4-203ENST00000442234 COX6CP09669 75 aa2.2□□□□□ -2.06
LIG4-203ENST00000442234 RFPL3SP0C7P2 107 aa2.2□□□□□ -2.06
LIG4-203ENST00000442234 SYNJ2BPP57105 145 aa2.2□□□□□ -2.06
LIG4-203ENST00000442234 FOXF2Q12947 444 aa2.2□□□□□ -2.06
LIG4-203ENST00000442234 ATXN8Q156A1 80 aa2.2□□□□□ -2.06
LIG4-203ENST00000442234 LINC00336Q6ZUF6 198 aa2.2□□□□□ -2.06
LIG4-203ENST00000442234 AAED1Q7RTV5 226 aa2.2□□□□□ -2.06
LIG4-203ENST00000442234 EXOC3-AS1Q8N2X6 119 aa2.2□□□□□ -2.06
LIG4-203ENST00000442234 SRSF12Q8WXF0 261 aaKnown RBP2.2□□□□□ -2.06
LIG4-203ENST00000442234 TRGV9Q99603 122 aa2.2□□□□□ -2.06
LIG4-203ENST00000442234 C7orf69Q9H7B7 122 aa2.2□□□□□ -2.06
LIG4-203ENST00000442234 IGHV3OR15-7A0A075B7D8 119 aa2.2□□□□□ -2.06
LIG4-203ENST00000442234 D6R8Y8 96 aa2.2□□□□□ -2.06
LIG4-203ENST00000442234 H0YIG0 161 aa2.2□□□□□ -2.06
LIG4-203ENST00000442234 FAM229AH3BQW9 127 aa2.2□□□□□ -2.06
LIG4-203ENST00000442234 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.2□□□□□ -2.06
LIG4-203ENST00000442234 M0R3E3 92 aa2.2□□□□□ -2.06
LIG4-203ENST00000442234 FCGR3BO75015 233 aa2.2□□□□□ -2.06
LIG4-203ENST00000442234 PYYP10082 97 aa2.2□□□□□ -2.06
LIG4-203ENST00000442234 LEPP41159 167 aa2.2□□□□□ -2.06
LIG4-203ENST00000442234 C6orf226Q5I0X4 101 aa2.2□□□□□ -2.06
LIG4-203ENST00000442234 PRIMA1Q86XR5 153 aa2.2□□□□□ -2.06
LIG4-203ENST00000442234 FGFBP3Q8TAT2 258 aa2.2□□□□□ -2.06
LIG4-203ENST00000442234 DPH3Q96FX2 82 aa2.2□□□□□ -2.06
LIG4-203ENST00000442234 DKK4Q9UBT3 224 aa2.2□□□□□ -2.06
LIG4-203ENST00000442234 DNHD1Q96M86 4753 aa2.2□□□□□ -2.06
LIG4-203ENST00000442234 IGKV1D-43A0A0B4J1Z2 117 aa2.2□□□□□ -2.06
LIG4-203ENST00000442234 LINC01548A6NM66 108 aa2.2□□□□□ -2.06
LIG4-203ENST00000442234 FAM90A5PA8MXJ8 464 aa2.2□□□□□ -2.06
LIG4-203ENST00000442234 CXCL13O43927 109 aa2.2□□□□□ -2.06
LIG4-203ENST00000442234 DEFB113Q30KQ7 82 aa2.2□□□□□ -2.06
LIG4-203ENST00000442234 VMA21Q3ZAQ7 101 aa2.2□□□□□ -2.06
LIG4-203ENST00000442234 MRPL55Q7Z7F7 128 aaKnown RBP2.2□□□□□ -2.06
LIG4-203ENST00000442234 TMEM86BQ8N661 226 aa2.2□□□□□ -2.06
LIG4-203ENST00000442234 C16orf92Q96LL3 132 aa2.2□□□□□ -2.06
LIG4-203ENST00000442234 PAXXQ9BUH6 204 aa2.2□□□□□ -2.06
LIG4-203ENST00000442234 OBSL1O75147 1896 aa2.2□□□□□ -2.06
LIG4-203ENST00000442234 A0A0G2JNJ9 132 aa2.19□□□□□ -2.06
LIG4-203ENST00000442234 TMEM89A2RUT3 159 aa2.19□□□□□ -2.06
LIG4-203ENST00000442234 IGLV3-19P01714 112 aa2.19□□□□□ -2.06
LIG4-203ENST00000442234 IGHG4P01861 327 aa2.19□□□□□ -2.06
LIG4-203ENST00000442234 NSUN5P1Q3KNT7 163 aa2.19□□□□□ -2.06
LIG4-203ENST00000442234 ZNF503Q96F45 646 aa2.19□□□□□ -2.06
LIG4-203ENST00000442234 SLC25A10Q9UBX3 287 aaPredicted RBP2.19□□□□□ -2.06
LIG4-203ENST00000442234 Q9UFV3 132 aa2.19□□□□□ -2.06
LIG4-203ENST00000442234 U3KQE9 123 aa2.19□□□□□ -2.06
LIG4-203ENST00000442234 NUP210Q8TEM1 1887 aaPredicted RBP2.19□□□□□ -2.06
LIG4-203ENST00000442234 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.19□□□□□ -2.06
LIG4-203ENST00000442234 A0A1W2PPV9 198 aa2.19□□□□□ -2.06
LIG4-203ENST00000442234 PINLYPA6NC86 204 aa2.19□□□□□ -2.06
LIG4-203ENST00000442234 LILRA5A6NI73 299 aa2.19□□□□□ -2.06
LIG4-203ENST00000442234 IGKV1-39P01597 117 aa2.19□□□□□ -2.06
LIG4-203ENST00000442234 IGKV1D-39P04432 117 aa2.19□□□□□ -2.06
LIG4-203ENST00000442234 CRYGDP07320 174 aa2.19□□□□□ -2.06
LIG4-203ENST00000442234 LOXL1Q08397 574 aaPredicted RBP2.19□□□□□ -2.06
LIG4-203ENST00000442234 LINC01620Q4KN68 170 aa2.19□□□□□ -2.06
LIG4-203ENST00000442234 S100A7L2Q5SY68 101 aa2.19□□□□□ -2.06
LIG4-203ENST00000442234 TEX36Q5VZQ5 186 aa2.19□□□□□ -2.06
LIG4-203ENST00000442234 COPS9Q8WXC6 57 aa2.19□□□□□ -2.06
LIG4-203ENST00000442234 PRDM14Q9GZV8 571 aa2.19□□□□□ -2.06
LIG4-203ENST00000442234 MRPL35Q9NZE8 188 aaKnown RBP2.19□□□□□ -2.06
LIG4-203ENST00000442234 RPUSD1Q9UJJ7 312 aaKnown RBP2.19□□□□□ -2.06
LIG4-203ENST00000442234 PLXNA2O75051 1894 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms