RNA–Protein interactions for RNA: ENST00000418800.6

DDR1-232, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene DDR1, Length 3,588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-232ENST00000418800 SPRY4Q9C004 299 aa9.16□□□□□ -0.94
DDR1-232ENST00000418800 PKD1L2Q7Z442 2459 aa9.15□□□□□ -0.94
DDR1-232ENST00000418800 IGHG3P01860 377 aa9.15□□□□□ -0.94
DDR1-232ENST00000418800 NDPQ00604 133 aa9.15□□□□□ -0.94
DDR1-232ENST00000418800 DTX2Q86UW9 622 aa9.15□□□□□ -0.94
DDR1-232ENST00000418800 PRR25Q96S07 402 aa9.15□□□□□ -0.94
DDR1-232ENST00000418800 SMPXQ9UHP9 88 aa9.15□□□□□ -0.94
DDR1-232ENST00000418800 DCHS2Q6V1P9 2916 aa9.15□□□□□ -0.94
DDR1-232ENST00000418800 CELSR1Q9NYQ6 3014 aa9.15□□□□□ -0.95
DDR1-232ENST00000418800 LAGE3Q14657 143 aa9.14□□□□□ -0.95
DDR1-232ENST00000418800 LYRM7Q5U5X0 104 aa9.14□□□□□ -0.95
DDR1-232ENST00000418800 SHISA2Q6UWI4 295 aa9.14□□□□□ -0.95
DDR1-232ENST00000418800 PRADC1Q9BSG0 188 aa9.14□□□□□ -0.95
DDR1-232ENST00000418800 IL17RELQ6ZVW7 336 aa9.14□□□□□ -0.95
DDR1-232ENST00000418800 PPDPFLQ8WWR9 84 aa9.14□□□□□ -0.95
DDR1-232ENST00000418800 CSMD2Q7Z408 3487 aa9.14□□□□□ -0.95
DDR1-232ENST00000418800 WI2-2373I1.2A0A1W2PRP0 233 aa9.14□□□□□ -0.95
DDR1-232ENST00000418800 TRGV3P03979 118 aa9.14□□□□□ -0.95
DDR1-232ENST00000418800 NFE4Q86UQ8 179 aa9.14□□□□□ -0.95
DDR1-232ENST00000418800 RNASE6Q93091 150 aaKnown RBP9.14□□□□□ -0.95
DDR1-232ENST00000418800 HHLA3Q9XRX5 114 aa9.14□□□□□ -0.95
DDR1-232ENST00000418800 FAM215AQ9Y5M1 114 aa9.14□□□□□ -0.95
DDR1-232ENST00000418800 PCSK5Q92824 1860 aa9.14□□□□□ -0.95
DDR1-232ENST00000418800 HIVEP3Q5T1R4 2406 aa9.13□□□□□ -0.95
DDR1-232ENST00000418800 MYMXA0A1B0GTQ4 84 aa9.13□□□□□ -0.95
DDR1-232ENST00000418800 PRAC2D3DTV9 90 aa9.13□□□□□ -0.95
DDR1-232ENST00000418800 BUB1B-PAK6H3BSN5 160 aa9.13□□□□□ -0.95
DDR1-232ENST00000418800 HTN1P15515 57 aa9.13□□□□□ -0.95
DDR1-232ENST00000418800 FSTL3O95633 263 aa9.13□□□□□ -0.95
DDR1-232ENST00000418800 CFAP161Q6P656 301 aa9.13□□□□□ -0.95
DDR1-232ENST00000418800 CLEC19AQ6UXS0 136 aa9.13□□□□□ -0.95
DDR1-232ENST00000418800 GATA4P43694 442 aa9.12□□□□□ -0.95
DDR1-232ENST00000418800 DLX6P56179 175 aa9.12□□□□□ -0.95
DDR1-232ENST00000418800 DEFB1P60022 68 aa9.12□□□□□ -0.95
DDR1-232ENST00000418800 FLNCQ14315 2725 aa9.12□□□□□ -0.95
DDR1-232ENST00000418800 ABCA2Q9BZC7 2435 aa9.12□□□□□ -0.95
DDR1-232ENST00000418800 IGHV3OR16-10A0A075B7F0 116 aa9.12□□□□□ -0.95
DDR1-232ENST00000418800 TRAV2A0A0B4J234 112 aa9.12□□□□□ -0.95
DDR1-232ENST00000418800 NPC2P61916 151 aa9.12□□□□□ -0.95
DDR1-232ENST00000418800 TM2D2Q9BX73 214 aa9.12□□□□□ -0.95
DDR1-232ENST00000418800 K7EIM0 57 aa9.12□□□□□ -0.95
DDR1-232ENST00000418800 PRR30Q53SZ7 412 aaPredicted RBP9.12□□□□□ -0.95
DDR1-232ENST00000418800 FAM74A4Q5TZK3 123 aa9.12□□□□□ -0.95
DDR1-232ENST00000418800 HIGD1BQ9P298 99 aa9.12□□□□□ -0.95
DDR1-232ENST00000418800 NBR2O15453 112 aa9.11□□□□□ -0.95
DDR1-232ENST00000418800 ASCL5Q7RTU5 278 aa9.11□□□□□ -0.95
DDR1-232ENST00000418800 DYNAPQ8N1N2 210 aa9.11□□□□□ -0.95
DDR1-232ENST00000418800 ANKRD29Q8N6D5 301 aa9.11□□□□□ -0.95
DDR1-232ENST00000418800 C14orf178Q8N769 122 aaPredicted RBP9.11□□□□□ -0.95
DDR1-232ENST00000418800 C16orf92Q96LL3 132 aa9.11□□□□□ -0.95
DDR1-232ENST00000418800 GAGE12JA6NER3 117 aa9.11□□□□□ -0.95
DDR1-232ENST00000418800 GAGE7O76087 117 aa9.11□□□□□ -0.95
DDR1-232ENST00000418800 IGKV3-20P01619 116 aa9.11□□□□□ -0.95
DDR1-232ENST00000418800 GAGE12FP0CL80 117 aa9.11□□□□□ -0.95
DDR1-232ENST00000418800 GAGE12GP0CL81 117 aa9.11□□□□□ -0.95
DDR1-232ENST00000418800 GAGE12IP0CL82 117 aa9.11□□□□□ -0.95
DDR1-232ENST00000418800 GAGE4Q13068 117 aa9.11□□□□□ -0.95
DDR1-232ENST00000418800 Q6ZQT7 251 aa9.11□□□□□ -0.95
DDR1-232ENST00000418800 H3BRN7 92 aa9.11□□□□□ -0.95
DDR1-232ENST00000418800 I3L2K1 104 aa9.11□□□□□ -0.95
DDR1-232ENST00000418800 ZNF688P0C7X2 276 aa9.11□□□□□ -0.95
DDR1-232ENST00000418800 SRSF1Q07955 248 aaKnown RBP eCLIP9.11□□□□□ -0.95
DDR1-232ENST00000418800 NTN5Q8WTR8 489 aaPredicted RBP9.11□□□□□ -0.95
DDR1-232ENST00000418800 PHLDA3Q9Y5J5 127 aa9.11□□□□□ -0.95
DDR1-232ENST00000418800 TNRC6BQ9UPQ9 1833 aaKnown RBP9.1□□□□□ -0.95
DDR1-232ENST00000418800 H7C1H1 209 aa9.1□□□□□ -0.95
DDR1-232ENST00000418800 SRD5A1P18405 259 aa9.1□□□□□ -0.95
DDR1-232ENST00000418800 PVRIGQ6DKI7 326 aa9.1□□□□□ -0.95
DDR1-232ENST00000418800 PHLDA1Q8WV24 401 aaPredicted RBP9.1□□□□□ -0.95
DDR1-232ENST00000418800 ERG28Q9UKR5 140 aa9.1□□□□□ -0.95
DDR1-232ENST00000418800 TEX22C9J3V5 150 aa9.1□□□□□ -0.95
DDR1-232ENST00000418800 CCDC179H3BU77 68 aa9.1□□□□□ -0.95
DDR1-232ENST00000418800 TRPT1Q86TN4 253 aaKnown RBP9.1□□□□□ -0.95
DDR1-232ENST00000418800 PLEKHB2Q96CS7 222 aa9.1□□□□□ -0.95
DDR1-232ENST00000418800 CDIP1Q9H305 208 aa9.1□□□□□ -0.95
DDR1-232ENST00000418800 DPM3Q9P2X0 92 aa9.1□□□□□ -0.95
DDR1-232ENST00000418800 MBD3L4A6NDZ8 208 aaPredicted RBP9.09□□□□□ -0.95
DDR1-232ENST00000418800 MBD3L3A6NE82 208 aaPredicted RBP9.09□□□□□ -0.95
DDR1-232ENST00000418800 MBD3L5A6NJ08 208 aaPredicted RBP9.09□□□□□ -0.95
DDR1-232ENST00000418800 CRYGCP07315 174 aa9.09□□□□□ -0.95
DDR1-232ENST00000418800 PLNP26678 52 aa9.09□□□□□ -0.95
DDR1-232ENST00000418800 HERVK_113P61574 105 aa9.09□□□□□ -0.95
DDR1-232ENST00000418800 TMEM30BQ3MIR4 351 aa9.09□□□□□ -0.95
DDR1-232ENST00000418800 MBD3L2Q8NHZ7 208 aaPredicted RBP9.09□□□□□ -0.95
DDR1-232ENST00000418800 CFHR4Q92496 578 aa9.09□□□□□ -0.95
DDR1-232ENST00000418800 TEX36Q5VZQ5 186 aa9.09□□□□□ -0.95
DDR1-232ENST00000418800 TEN1Q86WV5 123 aa9.09□□□□□ -0.95
DDR1-232ENST00000418800 CD3EP07766 207 aa9.09□□□□□ -0.95
DDR1-232ENST00000418800 RAI1Q7Z5J4 1906 aaPredicted RBP9.08□□□□□ -0.96
DDR1-232ENST00000418800 TRBV7-9A0A0J9YWB2 115 aa9.08□□□□□ -0.96
DDR1-232ENST00000418800 F8VRH5 84 aa9.08□□□□□ -0.96
DDR1-232ENST00000418800 FCN3O75636 299 aa9.08□□□□□ -0.96
DDR1-232ENST00000418800 TCL1BO95988 128 aa9.08□□□□□ -0.96
DDR1-232ENST00000418800 OR11H6Q8NGC7 330 aa9.08□□□□□ -0.96
DDR1-232ENST00000418800 CITED1Q99966 193 aa9.08□□□□□ -0.96
DDR1-232ENST00000418800 A0A087WX48 190 aa9.08□□□□□ -0.96
DDR1-232ENST00000418800 SLC25A20O43772 301 aa9.08□□□□□ -0.96
DDR1-232ENST00000418800 C15orf32Q32M92 178 aa9.08□□□□□ -0.96
DDR1-232ENST00000418800 FAM159AQ6UWV7 190 aa9.08□□□□□ -0.96
DDR1-232ENST00000418800 RAB1BQ9H0U4 201 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms