RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 OR5G3P0C626 314 aa3.09□□□□□ -1.91
HMGB3P19-201ENST00000403971 RAB2AP61019 212 aa3.09□□□□□ -1.91
HMGB3P19-201ENST00000403971 RAB14P61106 215 aa3.09□□□□□ -1.91
HMGB3P19-201ENST00000403971 RHOBP62745 196 aa3.09□□□□□ -1.91
HMGB3P19-201ENST00000403971 CLLU1Q5K131 121 aa3.09□□□□□ -1.91
HMGB3P19-201ENST00000403971 ALKAL2Q6UX46 152 aa3.09□□□□□ -1.91
HMGB3P19-201ENST00000403971 TOMM20LQ6UXN7 152 aa3.09□□□□□ -1.91
HMGB3P19-201ENST00000403971 NDUFA11Q86Y39 141 aa3.09□□□□□ -1.91
HMGB3P19-201ENST00000403971 RPP25LQ8N5L8 163 aaKnown RBP3.09□□□□□ -1.91
HMGB3P19-201ENST00000403971 OR10G4Q8NGN3 311 aa3.09□□□□□ -1.91
HMGB3P19-201ENST00000403971 OR1N2Q8NGR9 330 aa3.09□□□□□ -1.91
HMGB3P19-201ENST00000403971 LYPD6BQ8NI32 183 aa3.09□□□□□ -1.91
HMGB3P19-201ENST00000403971 MBD3L1Q8WWY6 194 aa3.09□□□□□ -1.91
HMGB3P19-201ENST00000403971 RARRES2Q99969 163 aa3.09□□□□□ -1.91
HMGB3P19-201ENST00000403971 ACTR3CQ9C0K3 210 aaPredicted RBP3.09□□□□□ -1.91
HMGB3P19-201ENST00000403971 MRPL27Q9P0M9 148 aaKnown RBP3.09□□□□□ -1.91
HMGB3P19-201ENST00000403971 PUS1Q9Y606 427 aaKnown RBP eCLIP3.09□□□□□ -1.91
HMGB3P19-201ENST00000403971 S4R3C0 116 aa3.09□□□□□ -1.91
HMGB3P19-201ENST00000403971 COL6A5A8TX70 2615 aa3.08□□□□□ -1.92
HMGB3P19-201ENST00000403971 A0A1W2PPV4 95 aa3.08□□□□□ -1.92
HMGB3P19-201ENST00000403971 PPP5D1E7EU14 171 aa3.08□□□□□ -1.92
HMGB3P19-201ENST00000403971 LINC01619G3V211 115 aa3.08□□□□□ -1.92
HMGB3P19-201ENST00000403971 H3BRN7 92 aa3.08□□□□□ -1.92
HMGB3P19-201ENST00000403971 COX7A2P2O60397 106 aa3.08□□□□□ -1.92
HMGB3P19-201ENST00000403971 NDUFS6O75380 124 aaKnown RBP3.08□□□□□ -1.92
HMGB3P19-201ENST00000403971 TRBV12-3P01733 135 aa3.08□□□□□ -1.92
HMGB3P19-201ENST00000403971 IL4P05112 153 aa3.08□□□□□ -1.92
HMGB3P19-201ENST00000403971 CD5P06127 495 aa3.08□□□□□ -1.92
HMGB3P19-201ENST00000403971 STAG3L2P0CL84 134 aa3.08□□□□□ -1.92
HMGB3P19-201ENST00000403971 STAG3L3P0CL85 134 aa3.08□□□□□ -1.92
HMGB3P19-201ENST00000403971 C8orf88P0DMB2 117 aa3.08□□□□□ -1.92
HMGB3P19-201ENST00000403971 CD28P10747 220 aa3.08□□□□□ -1.92
HMGB3P19-201ENST00000403971 ORM2P19652 201 aa3.08□□□□□ -1.92
HMGB3P19-201ENST00000403971 NPPCP23582 126 aa3.08□□□□□ -1.92
HMGB3P19-201ENST00000403971 CRYBB3P26998 211 aa3.08□□□□□ -1.92
HMGB3P19-201ENST00000403971 BMI1P35226 326 aa3.08□□□□□ -1.92
HMGB3P19-201ENST00000403971 MYCNOSP40205 109 aa3.08□□□□□ -1.92
HMGB3P19-201ENST00000403971 CXCL5P42830 114 aa3.08□□□□□ -1.92
HMGB3P19-201ENST00000403971 CDC34P49427 236 aaPredicted RBP3.08□□□□□ -1.92
HMGB3P19-201ENST00000403971 TAS2R45P59539 299 aa3.08□□□□□ -1.92
HMGB3P19-201ENST00000403971 DEFA5Q01523 94 aa3.08□□□□□ -1.92
HMGB3P19-201ENST00000403971 USF2Q15853 346 aaPredicted RBP3.08□□□□□ -1.92
HMGB3P19-201ENST00000403971 RPEL1Q2QD12 228 aa3.08□□□□□ -1.92
HMGB3P19-201ENST00000403971 FAM74A1Q5RGS3 127 aa3.08□□□□□ -1.92
HMGB3P19-201ENST00000403971 C1orf194Q5T5A4 169 aa3.08□□□□□ -1.92
HMGB3P19-201ENST00000403971 FAM78BQ5VT40 261 aa3.08□□□□□ -1.92
HMGB3P19-201ENST00000403971 C10orf113Q5VZT2 155 aa3.08□□□□□ -1.92
HMGB3P19-201ENST00000403971 PATE2Q6UY27 113 aa3.08□□□□□ -1.92
HMGB3P19-201ENST00000403971 LINC00173Q6ZV60 143 aa3.08□□□□□ -1.92
HMGB3P19-201ENST00000403971 LINC00305Q7Z4B0 112 aa3.08□□□□□ -1.92
HMGB3P19-201ENST00000403971 CAMK2N1Q7Z7J9 78 aa3.08□□□□□ -1.92
HMGB3P19-201ENST00000403971 OR11H1Q8NG94 326 aa3.08□□□□□ -1.92
HMGB3P19-201ENST00000403971 FAM213BQ8TBF2 198 aa3.08□□□□□ -1.92
HMGB3P19-201ENST00000403971 FAM210BQ96KR6 192 aa3.08□□□□□ -1.92
HMGB3P19-201ENST00000403971 FAM167A-AS1Q96KT0 104 aa3.08□□□□□ -1.92
HMGB3P19-201ENST00000403971 GPR82Q96P67 336 aa3.08□□□□□ -1.92
HMGB3P19-201ENST00000403971 METTL26Q96S19 204 aa3.08□□□□□ -1.92
HMGB3P19-201ENST00000403971 SHANK2-AS3Q9BTD1 123 aa3.08□□□□□ -1.92
HMGB3P19-201ENST00000403971 VSIRQ9H7M9 311 aa3.08□□□□□ -1.92
HMGB3P19-201ENST00000403971 DAZ1Q9NQZ3 744 aaKnown RBP3.08□□□□□ -1.92
HMGB3P19-201ENST00000403971 MED9Q9NWA0 146 aa3.08□□□□□ -1.92
HMGB3P19-201ENST00000403971 TMEM14CQ9P0S9 112 aa3.08□□□□□ -1.92
HMGB3P19-201ENST00000403971 RABAC1Q9UI14 185 aa3.08□□□□□ -1.92
HMGB3P19-201ENST00000403971 FUT9Q9Y231 359 aa3.08□□□□□ -1.92
HMGB3P19-201ENST00000403971 HIGD1AQ9Y241 93 aa3.08□□□□□ -1.92
HMGB3P19-201ENST00000403971 UFC1Q9Y3C8 167 aa3.08□□□□□ -1.92
HMGB3P19-201ENST00000403971 RFNGQ9Y644 331 aa3.08□□□□□ -1.92
HMGB3P19-201ENST00000403971 ARL2-SNX15V9GYD0 113 aa3.08□□□□□ -1.92
HMGB3P19-201ENST00000403971 STAB1Q9NY15 2570 aa3.08□□□□□ -1.92
HMGB3P19-201ENST00000403971 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.07□□□□□ -1.92
HMGB3P19-201ENST00000403971 A0A096LNJ9 63 aa3.07□□□□□ -1.92
HMGB3P19-201ENST00000403971 IGHV7-4-1A0A0J9YVY3 117 aa3.07□□□□□ -1.92
HMGB3P19-201ENST00000403971 MAP1LC3B2A6NCE7 125 aa3.07□□□□□ -1.92
HMGB3P19-201ENST00000403971 ZNF98A6NK75 572 aa3.07□□□□□ -1.92
HMGB3P19-201ENST00000403971 PEX7O00628 323 aa3.07□□□□□ -1.92
HMGB3P19-201ENST00000403971 MRPS12O15235 138 aaKnown RBP3.07□□□□□ -1.92
HMGB3P19-201ENST00000403971 CXorf1O96002 111 aa3.07□□□□□ -1.92
HMGB3P19-201ENST00000403971 RPL7P18124 248 aaKnown RBP3.07□□□□□ -1.92
HMGB3P19-201ENST00000403971 PSMB3P49720 205 aa3.07□□□□□ -1.92
HMGB3P19-201ENST00000403971 ZNF726P1Q15940 193 aa3.07□□□□□ -1.92
HMGB3P19-201ENST00000403971 TMEM183BQ1AE95 376 aa3.07□□□□□ -1.92
HMGB3P19-201ENST00000403971 KHDC3LQ587J8 217 aa3.07□□□□□ -1.92
HMGB3P19-201ENST00000403971 GCSAMLQ5JQS6 135 aa3.07□□□□□ -1.92
HMGB3P19-201ENST00000403971 UNQ9165/PRO28630Q6UXU0 137 aa3.07□□□□□ -1.92
HMGB3P19-201ENST00000403971 BPIFA4PQ86YQ2 179 aa3.07□□□□□ -1.92
HMGB3P19-201ENST00000403971 TMEM183AQ8IXX5 376 aa3.07□□□□□ -1.92
HMGB3P19-201ENST00000403971 SUN5Q8TC36 379 aa3.07□□□□□ -1.92
HMGB3P19-201ENST00000403971 SFT2D1Q8WV19 159 aa3.07□□□□□ -1.92
HMGB3P19-201ENST00000403971 NARS2Q96I59 477 aaKnown RBP3.07□□□□□ -1.92
HMGB3P19-201ENST00000403971 OR5B12Q96R08 314 aa3.07□□□□□ -1.92
HMGB3P19-201ENST00000403971 TXNDC17Q9BRA2 123 aa3.07□□□□□ -1.92
HMGB3P19-201ENST00000403971 PBDC1Q9BVG4 233 aa3.07□□□□□ -1.92
HMGB3P19-201ENST00000403971 NKX6-2Q9C056 277 aaPredicted RBP3.07□□□□□ -1.92
HMGB3P19-201ENST00000403971 MAP1LC3BQ9GZQ8 125 aa3.07□□□□□ -1.92
HMGB3P19-201ENST00000403971 SMDT1Q9H4I9 107 aa3.07□□□□□ -1.92
HMGB3P19-201ENST00000403971 TMEM167BQ9NRX6 74 aa3.07□□□□□ -1.92
HMGB3P19-201ENST00000403971 SMPXQ9UHP9 88 aa3.07□□□□□ -1.92
HMGB3P19-201ENST00000403971 TENM1Q9UKZ4 2725 aa3.06□□□□□ -1.92
HMGB3P19-201ENST00000403971 A0A1W2PRE2 83 aa3.06□□□□□ -1.92
HMGB3P19-201ENST00000403971 TMEM213A2RRL7 107 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms