RNA–Protein interactions for RNA: ENST00000402989.5

SMC6-203, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMC6, Length 3,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-203ENST00000402989 TNFRSF6BO95407 300 aa3.34□□□□□ -1.87
SMC6-203ENST00000402989 EBI3Q14213 229 aa3.34□□□□□ -1.87
SMC6-203ENST00000402989 KHDC1LQ5JSQ8 128 aa3.34□□□□□ -1.87
SMC6-203ENST00000402989 PCP2Q8IVA1 136 aa3.34□□□□□ -1.87
SMC6-203ENST00000402989 OR4X2Q8NGF9 303 aa3.34□□□□□ -1.87
SMC6-203ENST00000402989 TMEM158Q8WZ71 300 aa3.34□□□□□ -1.87
SMC6-203ENST00000402989 ST20Q9HBF5 79 aa3.34□□□□□ -1.87
SMC6-203ENST00000402989 TMEM160Q9NX00 188 aa3.34□□□□□ -1.87
SMC6-203ENST00000402989 CCL25O15444 150 aa3.34□□□□□ -1.88
SMC6-203ENST00000402989 AVPP01185 164 aa3.34□□□□□ -1.88
SMC6-203ENST00000402989 FCER1GP30273 86 aa3.34□□□□□ -1.88
SMC6-203ENST00000402989 GTSCR1Q86UQ5 136 aa3.34□□□□□ -1.88
SMC6-203ENST00000402989 SLC50A1Q9BRV3 221 aa3.34□□□□□ -1.88
SMC6-203ENST00000402989 PPP1R14DQ9NXH3 145 aa3.34□□□□□ -1.88
SMC6-203ENST00000402989 PRRC2AP48634 2157 aaKnown RBP3.34□□□□□ -1.88
SMC6-203ENST00000402989 RPS20P60866 119 aaKnown RBP3.33□□□□□ -1.88
SMC6-203ENST00000402989 C14orf178Q8N769 122 aaPredicted RBP3.33□□□□□ -1.88
SMC6-203ENST00000402989 OR10J6PQ8NGY7 276 aa3.33□□□□□ -1.88
SMC6-203ENST00000402989 COX11Q9Y6N1 276 aa3.33□□□□□ -1.88
SMC6-203ENST00000402989 FLNAP21333 2647 aaKnown RBP3.33□□□□□ -1.88
SMC6-203ENST00000402989 TRBV7-1A0A0A6YYK4 115 aa3.33□□□□□ -1.88
SMC6-203ENST00000402989 TRAV8-6A0A0B4J262 113 aa3.33□□□□□ -1.88
SMC6-203ENST00000402989 F5H697 171 aa3.33□□□□□ -1.88
SMC6-203ENST00000402989 K7EP13 123 aa3.33□□□□□ -1.88
SMC6-203ENST00000402989 GNRH2O43555 120 aa3.33□□□□□ -1.88
SMC6-203ENST00000402989 IGHV4-59P01825 116 aa3.33□□□□□ -1.88
SMC6-203ENST00000402989 ZNF688P0C7X2 276 aa3.33□□□□□ -1.88
SMC6-203ENST00000402989 S100A7P31151 101 aa3.33□□□□□ -1.88
SMC6-203ENST00000402989 FAM74A4Q5TZK3 123 aa3.33□□□□□ -1.88
SMC6-203ENST00000402989 AMMECR1LQ6DCA0 310 aa3.33□□□□□ -1.88
SMC6-203ENST00000402989 PIFOQ8TCI5 191 aa3.33□□□□□ -1.88
SMC6-203ENST00000402989 RHPN1-AS1Q9BWJ2 59 aa3.33□□□□□ -1.88
SMC6-203ENST00000402989 NPFFR1Q9GZQ6 430 aa3.33□□□□□ -1.88
SMC6-203ENST00000402989 SCRT2Q9NQ03 307 aa3.33□□□□□ -1.88
SMC6-203ENST00000402989 MRPS16Q9Y3D3 137 aaKnown RBP3.33□□□□□ -1.88
SMC6-203ENST00000402989 PHLDA3Q9Y5J5 127 aa3.33□□□□□ -1.88
SMC6-203ENST00000402989 TRBV6-1A0A0K0K1D8 114 aa3.33□□□□□ -1.88
SMC6-203ENST00000402989 A0A1B0GW15 77 aa3.33□□□□□ -1.88
SMC6-203ENST00000402989 TGFAP01135 160 aa3.33□□□□□ -1.88
SMC6-203ENST00000402989 IGLC6P0CF74 106 aa3.33□□□□□ -1.88
SMC6-203ENST00000402989 GCSHP23434 173 aa3.33□□□□□ -1.88
SMC6-203ENST00000402989 EMP1P54849 157 aa3.33□□□□□ -1.88
SMC6-203ENST00000402989 BVES-AS1Q5T3Y7 98 aa3.33□□□□□ -1.88
SMC6-203ENST00000402989 LINC01545Q5VT33 79 aa3.33□□□□□ -1.88
SMC6-203ENST00000402989 RNF185Q96GF1 192 aa3.33□□□□□ -1.88
SMC6-203ENST00000402989 ZNF48Q96MX3 618 aaPredicted RBP3.33□□□□□ -1.88
SMC6-203ENST00000402989 AP1S3Q96PC3 154 aa3.33□□□□□ -1.88
SMC6-203ENST00000402989 PRORYQ9H606 182 aa3.33□□□□□ -1.88
SMC6-203ENST00000402989 TRAV12-2A0A075B6T6 113 aa3.32□□□□□ -1.88
SMC6-203ENST00000402989 MSMBP08118 114 aa3.32□□□□□ -1.88
SMC6-203ENST00000402989 ANXA2RQ3ZCQ2 193 aa3.32□□□□□ -1.88
SMC6-203ENST00000402989 C10orf105Q8TEF2 133 aa3.32□□□□□ -1.88
SMC6-203ENST00000402989 RPL39LQ96EH5 51 aaKnown RBP3.32□□□□□ -1.88
SMC6-203ENST00000402989 DUX3Q96PT4 197 aa3.32□□□□□ -1.88
SMC6-203ENST00000402989 A0A087WWL8 130 aa3.32□□□□□ -1.88
SMC6-203ENST00000402989 TRAV12-3A0A0B4J271 114 aa3.32□□□□□ -1.88
SMC6-203ENST00000402989 ZNF493Q6ZR52 646 aa3.32□□□□□ -1.88
SMC6-203ENST00000402989 C11orf44Q8N8P7 122 aa3.32□□□□□ -1.88
SMC6-203ENST00000402989 OR2K2Q8NGT1 345 aa3.32□□□□□ -1.88
SMC6-203ENST00000402989 LINC00477Q96M19 166 aa3.32□□□□□ -1.88
SMC6-203ENST00000402989 JPT2Q9H910 190 aa3.32□□□□□ -1.88
SMC6-203ENST00000402989 SFTPCP11686 197 aa3.32□□□□□ -1.88
SMC6-203ENST00000402989 RAB9AP51151 201 aa3.32□□□□□ -1.88
SMC6-203ENST00000402989 DEFB112Q30KQ8 113 aa3.32□□□□□ -1.88
SMC6-203ENST00000402989 PSMG4Q5JS54 123 aa3.32□□□□□ -1.88
SMC6-203ENST00000402989 HECTD1Q9ULT8 2610 aa3.32□□□□□ -1.88
SMC6-203ENST00000402989 ITPR3Q14573 2671 aa3.31□□□□□ -1.88
SMC6-203ENST00000402989 IGKV2D-26A0A0A0MRZ7 120 aa3.31□□□□□ -1.88
SMC6-203ENST00000402989 RNF223E7ERA6 249 aa3.31□□□□□ -1.88
SMC6-203ENST00000402989 H3BUT2 72 aa3.31□□□□□ -1.88
SMC6-203ENST00000402989 TAX1BP3O14907 124 aa3.31□□□□□ -1.88
SMC6-203ENST00000402989 CRXO43186 299 aaPredicted RBP3.31□□□□□ -1.88
SMC6-203ENST00000402989 SMIM17P0DL12 118 aa3.31□□□□□ -1.88
SMC6-203ENST00000402989 COX8AP10176 69 aa3.31□□□□□ -1.88
SMC6-203ENST00000402989 DEFB136Q30KP8 78 aa3.31□□□□□ -1.88
SMC6-203ENST00000402989 TMEM97Q5BJF2 176 aa3.31□□□□□ -1.88
SMC6-203ENST00000402989 C12orf54Q6X4T0 127 aa3.31□□□□□ -1.88
SMC6-203ENST00000402989 BEX4Q9NWD9 120 aaPredicted RBP3.31□□□□□ -1.88
SMC6-203ENST00000402989 TMEM8BA6NDV4 472 aa3.31□□□□□ -1.88
SMC6-203ENST00000402989 K7ERJ3 54 aa3.31□□□□□ -1.88
SMC6-203ENST00000402989 ASIPP42127 132 aa3.31□□□□□ -1.88
SMC6-203ENST00000402989 SYNJ2BPP57105 145 aa3.31□□□□□ -1.88
SMC6-203ENST00000402989 ZC2HC1BQ5TFG8 222 aa3.31□□□□□ -1.88
SMC6-203ENST00000402989 C2orf91Q6ZV80 131 aa3.31□□□□□ -1.88
SMC6-203ENST00000402989 ZNF575Q86XF7 245 aa3.31□□□□□ -1.88
SMC6-203ENST00000402989 MYOZ3Q8TDC0 251 aa3.31□□□□□ -1.88
SMC6-203ENST00000402989 RNASE8Q8TDE3 154 aaKnown RBP3.31□□□□□ -1.88
SMC6-203ENST00000402989 MRPL35Q9NZE8 188 aaKnown RBP3.31□□□□□ -1.88
SMC6-203ENST00000402989 KLK9Q9UKQ9 250 aa3.31□□□□□ -1.88
SMC6-203ENST00000402989 IGHV7-4-1A0A0J9YVY3 117 aa3.31□□□□□ -1.88
SMC6-203ENST00000402989 FAM223BA6NKX1 122 aa3.31□□□□□ -1.88
SMC6-203ENST00000402989 CD7P09564 240 aa3.31□□□□□ -1.88
SMC6-203ENST00000402989 UBE2V1Q13404 147 aa3.31□□□□□ -1.88
SMC6-203ENST00000402989 C9orf139Q6ZV77 190 aa3.31□□□□□ -1.88
SMC6-203ENST00000402989 FAM223AQ8IWN6 122 aa3.31□□□□□ -1.88
SMC6-203ENST00000402989 IGHV3-73A0A0B4J1V6 119 aa3.3□□□□□ -1.88
SMC6-203ENST00000402989 SFTA2Q6UW10 78 aa3.3□□□□□ -1.88
SMC6-203ENST00000402989 MRPL52Q86TS9 123 aaKnown RBP3.3□□□□□ -1.88
SMC6-203ENST00000402989 GPHB5Q86YW7 130 aa3.3□□□□□ -1.88
SMC6-203ENST00000402989 ORAOV1Q8WV07 137 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 1959.5 ms