RNA–Protein interactions for RNA: ENST00000402802.7

PDGFA-203, Transcript of platelet derived growth factor subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFA, Length 2,305 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-203ENST00000402802 ERG28Q9UKR5 140 aa12.42□□□□□ -0.42
PDGFA-203ENST00000402802 DPM2O94777 84 aa12.41□□□□□ -0.42
PDGFA-203ENST00000402802 HES1Q14469 280 aa12.41□□□□□ -0.42
PDGFA-203ENST00000402802 GTSCR1Q86UQ5 136 aa12.41□□□□□ -0.42
PDGFA-203ENST00000402802 K7EMI3 77 aa12.4□□□□□ -0.42
PDGFA-203ENST00000402802 ATP5LO75964 103 aa12.4□□□□□ -0.42
PDGFA-203ENST00000402802 PRSS1P07477 247 aa12.4□□□□□ -0.42
PDGFA-203ENST00000402802 GATA3P23771 443 aa12.4□□□□□ -0.42
PDGFA-203ENST00000402802 SAA4P35542 130 aa12.4□□□□□ -0.42
PDGFA-203ENST00000402802 ZC2HC1BQ5TFG8 222 aa12.4□□□□□ -0.42
PDGFA-203ENST00000402802 AJUBAQ96IF1 538 aa12.4□□□□□ -0.42
PDGFA-203ENST00000402802 FAM110AQ9BQ89 295 aa12.4□□□□□ -0.42
PDGFA-203ENST00000402802 SIGLEC9Q9Y336 463 aa12.4□□□□□ -0.42
PDGFA-203ENST00000402802 ZNF469Q96JG9 3925 aaPredicted RBP12.39□□□□□ -0.43
PDGFA-203ENST00000402802 HERV-K104P63124 156 aa12.39□□□□□ -0.43
PDGFA-203ENST00000402802 TWIST1Q15672 202 aa12.39□□□□□ -0.43
PDGFA-203ENST00000402802 LYPD1Q8N2G4 141 aa12.39□□□□□ -0.43
PDGFA-203ENST00000402802 MAP1LC3AQ9H492 121 aa12.39□□□□□ -0.43
PDGFA-203ENST00000402802 TRBV19A0A075B6N1 114 aa12.39□□□□□ -0.43
PDGFA-203ENST00000402802 CENPVL3A0A0U1RRI6 287 aa12.39□□□□□ -0.43
PDGFA-203ENST00000402802 SMKR1H3BMG3 65 aa12.39□□□□□ -0.43
PDGFA-203ENST00000402802 CRYGBP07316 175 aa12.39□□□□□ -0.43
PDGFA-203ENST00000402802 LEPP41159 167 aa12.39□□□□□ -0.43
PDGFA-203ENST00000402802 BRD3OSQ6XYD6 125 aa12.39□□□□□ -0.43
PDGFA-203ENST00000402802 Q6ZUT4 128 aa12.39□□□□□ -0.43
PDGFA-203ENST00000402802 MT-ATP8P03928 68 aa12.38□□□□□ -0.43
PDGFA-203ENST00000402802 UBE2E1P51965 193 aa12.38□□□□□ -0.43
PDGFA-203ENST00000402802 PLGLAQ15195 96 aa12.38□□□□□ -0.43
PDGFA-203ENST00000402802 LINC01619G3V211 115 aa12.38□□□□□ -0.43
PDGFA-203ENST00000402802 LYZP61626 148 aa12.38□□□□□ -0.43
PDGFA-203ENST00000402802 CFAP126Q5VTH2 177 aa12.38□□□□□ -0.43
PDGFA-203ENST00000402802 RNF183Q96D59 192 aa12.38□□□□□ -0.43
PDGFA-203ENST00000402802 HIST1H4GQ99525 98 aa12.38□□□□□ -0.43
PDGFA-203ENST00000402802 ASCL2Q99929 193 aa12.38□□□□□ -0.43
PDGFA-203ENST00000402802 CCDC168Q8NDH2 2452 aa12.37□□□□□ -0.43
PDGFA-203ENST00000402802 TRAV40A0A0B4J280 105 aa12.37□□□□□ -0.43
PDGFA-203ENST00000402802 TRBV7-9A0A0J9YWB2 115 aa12.37□□□□□ -0.43
PDGFA-203ENST00000402802 PPP1R27Q86WC6 154 aa12.37□□□□□ -0.43
PDGFA-203ENST00000402802 MAPKAPK5-AS1Q8N8E1 139 aa12.37□□□□□ -0.43
PDGFA-203ENST00000402802 FOXC2Q99958 501 aa12.37□□□□□ -0.43
PDGFA-203ENST00000402802 NXT2Q9NPJ8 142 aaKnown RBP12.37□□□□□ -0.43
PDGFA-203ENST00000402802 IGHV4-38-2P0DP08 117 aa12.37□□□□□ -0.43
PDGFA-203ENST00000402802 SIGLEC15Q6ZMC9 328 aa12.37□□□□□ -0.43
PDGFA-203ENST00000402802 TMEM158Q8WZ71 300 aa12.37□□□□□ -0.43
PDGFA-203ENST00000402802 CSPG4Q6UVK1 2322 aa12.37□□□□□ -0.43
PDGFA-203ENST00000402802 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.36□□□□□ -0.43
PDGFA-203ENST00000402802 TRBV7-3A0A075B6L6 115 aa12.36□□□□□ -0.43
PDGFA-203ENST00000402802 C8orf49Q96NF6 230 aa12.36□□□□□ -0.43
PDGFA-203ENST00000402802 PSMG3-AS1Q96PY0 264 aa12.36□□□□□ -0.43
PDGFA-203ENST00000402802 VCX2Q9H322 139 aa12.36□□□□□ -0.43
PDGFA-203ENST00000402802 RNF223E7ERA6 249 aa12.36□□□□□ -0.43
PDGFA-203ENST00000402802 J3KRW8 73 aa12.36□□□□□ -0.43
PDGFA-203ENST00000402802 NPFFO15130 113 aa12.36□□□□□ -0.43
PDGFA-203ENST00000402802 BRI3O95415 125 aa12.36□□□□□ -0.43
PDGFA-203ENST00000402802 MSMBP08118 114 aa12.36□□□□□ -0.43
PDGFA-203ENST00000402802 XGP55808 180 aa12.36□□□□□ -0.43
PDGFA-203ENST00000402802 MINOS1Q5TGZ0 78 aa12.36□□□□□ -0.43
PDGFA-203ENST00000402802 HIF1ANQ9NWT6 349 aa12.36□□□□□ -0.43
PDGFA-203ENST00000402802 MINOS1-NBL1R4GNA1 71 aa12.36□□□□□ -0.43
PDGFA-203ENST00000402802 TMSB15BA0A087X1C1 80 aa12.35□□□□□ -0.43
PDGFA-203ENST00000402802 NCBP2LA6PVI3 153 aaKnown RBP12.35□□□□□ -0.43
PDGFA-203ENST00000402802 NBR2O15453 112 aa12.35□□□□□ -0.43
PDGFA-203ENST00000402802 AVPP01185 164 aa12.35□□□□□ -0.43
PDGFA-203ENST00000402802 PPIFP30405 207 aaKnown RBP12.35□□□□□ -0.43
PDGFA-203ENST00000402802 RPL27AP46776 148 aaKnown RBP12.35□□□□□ -0.43
PDGFA-203ENST00000402802 DEFB113Q30KQ7 82 aa12.35□□□□□ -0.43
PDGFA-203ENST00000402802 A0A096LNT2 108 aa12.34□□□□□ -0.43
PDGFA-203ENST00000402802 SH2D1AO60880 128 aa12.34□□□□□ -0.43
PDGFA-203ENST00000402802 SMCPP49901 116 aaPredicted RBP12.34□□□□□ -0.43
PDGFA-203ENST00000402802 NFE4Q86UQ8 179 aa12.34□□□□□ -0.43
PDGFA-203ENST00000402802 IGHV3-21A0A0B4J1V1 117 aa12.34□□□□□ -0.43
PDGFA-203ENST00000402802 GAGE5Q13069 117 aa12.34□□□□□ -0.43
PDGFA-203ENST00000402802 GAGE6Q13070 117 aa12.34□□□□□ -0.43
PDGFA-203ENST00000402802 FHL3Q13643 280 aa12.34□□□□□ -0.43
PDGFA-203ENST00000402802 MORN3Q6PF18 240 aaPredicted RBP12.34□□□□□ -0.43
PDGFA-203ENST00000402802 DLX4Q92988 240 aaPredicted RBP12.34□□□□□ -0.43
PDGFA-203ENST00000402802 C17orf77Q96MU5 243 aa12.34□□□□□ -0.43
PDGFA-203ENST00000402802 TMEM160Q9NX00 188 aa12.34□□□□□ -0.43
PDGFA-203ENST00000402802 FASNP49327 2511 aaKnown RBP12.34□□□□□ -0.43
PDGFA-203ENST00000402802 HECTD1Q9ULT8 2610 aa12.34□□□□□ -0.43
PDGFA-203ENST00000402802 PRRC2AP48634 2157 aaKnown RBP12.33□□□□□ -0.43
PDGFA-203ENST00000402802 ITPR2Q14571 2701 aa12.33□□□□□ -0.43
PDGFA-203ENST00000402802 RNF185Q96GF1 192 aa12.33□□□□□ -0.44
PDGFA-203ENST00000402802 SHANK2-AS3Q9BTD1 123 aa12.33□□□□□ -0.44
PDGFA-203ENST00000402802 HOXA3O43365 443 aaPredicted RBP12.33□□□□□ -0.44
PDGFA-203ENST00000402802 SLC25A16P16260 332 aa12.33□□□□□ -0.44
PDGFA-203ENST00000402802 DSCR9P59020 149 aa12.33□□□□□ -0.44
PDGFA-203ENST00000402802 COX8CQ7Z4L0 72 aa12.33□□□□□ -0.44
PDGFA-203ENST00000402802 ANAPC13Q9BS18 74 aa12.33□□□□□ -0.44
PDGFA-203ENST00000402802 CREBBPQ92793 2442 aa12.32□□□□□ -0.44
PDGFA-203ENST00000402802 TEX22C9J3V5 150 aa12.32□□□□□ -0.44
PDGFA-203ENST00000402802 CNIH1O95406 144 aa12.32□□□□□ -0.44
PDGFA-203ENST00000402802 AGRNO00468 2067 aa12.32□□□□□ -0.44
PDGFA-203ENST00000402802 B4DSR2 109 aa12.32□□□□□ -0.44
PDGFA-203ENST00000402802 PPDPFLQ8WWR9 84 aa12.32□□□□□ -0.44
PDGFA-203ENST00000402802 MRPL35Q9NZE8 188 aaKnown RBP12.32□□□□□ -0.44
PDGFA-203ENST00000402802 IGHV1-69DA0A0B4J2H0 117 aa12.31□□□□□ -0.44
PDGFA-203ENST00000402802 NDUFA3O95167 84 aa12.31□□□□□ -0.44
PDGFA-203ENST00000402802 TNFRSF6BO95407 300 aa12.31□□□□□ -0.44
PDGFA-203ENST00000402802 IGHV1-69P01742 117 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms